Program blastn blastp blastx tblastn tblastx Database Genome: Amaranthus hypochondriacus Genome: Arabidopsis thaliana Genome: Azadirachta indica Genome: Beta vulgaris (Published) Genome: Beta vulgaris (USDA) Genome: Brachypodium distachyon Genome: Brassica rapa Genome: Cannabis sativa Genome: Citrus sinensis Genome: Cucumis sativus Genome: Fragaria vesca Genome: Glycine max Genome: Malus domestica Genome: Medicago truncatula Genome: Oryza sativa Genome: Physcomitrella patens Genome: Populus trichocarpa Genome: Ricinus communis Genome: Selaginella moellendorffii Genome: Setaria italica Genome: Solanum lycopersicum Genome: Solanum tuberosum Genome: Sorghum bicolor Genome: Vitis vinifera Genome: Volvox carteri Genome: Zea mays cDNA: Amaranthus hypochondriacus cDNA: Vitis vinifera CDS: Solanum lycopersicum CDS: Oryza sativa mRNA: Vitis vinifera T'ome: Amaranthus hypochondriacus v1 Protein: Amaranthus hypochondriacus Proteome: Arabidopsis thaliana Proteome: Vitis vinifera
Enter here your input data as Sequence in FASTA format Accession or GI Or load it from disk
Please read about FASTA format description
Set subsequence: From       To
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Database Genetic Codes (tblast[nx] only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
Limit search to results of Entrez query
Other advanced options: Show Tax Blast reports