TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_005843.4 (Number of probes = 54)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228254_at	130	1059
	282	713
	230	521
	929	1093
	536	21
	304	129
	155	687
	156	63
	1108	65
	941	979
	4	1073
215044_s_at	15	541
	513	535
	451	131
	1005	123
	893	511
	1074	195
	962	19
	419	307
	413	57
	1056	519
	237	335
208194_s_at	808	141
	1073	625
	1009	595
	714	835
	12	29
	807	1053
	1014	839
	512	45
	1148	329
	80	905
	445	151
242569_at	1147	221
	283	515
	193	567
	878	801
	257	729
	84	1133
	1155	681
	70	1017
	140	797
	1077	847
	147	539
209649_at	403	951
	379	1011
	1069	585
	421	1083
	133	707
	1059	211
	328	353
	256	213
	252	751
	147	715

For Human genome U133 A 2 array
[RefSeq ID: NM_005843.4 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215044_s_at	15	187
	466	109
	144	323
	123	313
	165	31
	670	307
	162	13
	98	171
	410	69
	727	71
	452	325
208194_s_at	618	185
	444	15
	56	377
	436	75
	362	541
	689	81
	172	499
	262	499
	122	27
	545	629
	82	359
209649_at	560	647
	128	425
	215	119
	260	607
	128	567
	256	199
	444	353
	553	447
	31	429
	714	117

For Human genome U133 A array
[RefSeq ID: NM_005843.4 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215044_s_at	563	31
	470	111
	441	187
	133	323
	418	75
	116	13
	573	173
	388	335
	438	71
	265	333
	49	317
208194_s_at	266	85
	344	557
	328	187
	485	515
	583	513
	440	81
	554	369
	200	653
	250	389
	94	27
	473	17
209649_at	627	667
	521	587
	694	121
	574	625
	46	123
	287	463
	214	435
	657	203
	494	441
	627	363

For Human genome U133 B array
[RefSeq ID: NM_005843.4 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228254_at	490	315
	264	657
	215	41
	393	77
	498	435
	158	667
	301	39
	119	419
	366	647
	464	13
	398	599
242569_at	172	311
	605	129
	585	621
	119	325
	145	487
	13	445
	24	345
	700	489
	384	415
	127	695
	399	521

For Human genome U95 Av2 array
[RefSeq ID: NM_005843.4 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
38525_at	82	185
	122	369
	9	227
	117	73
	300	255
	132	177
	346	49
	592	469
	194	185
	32	255
	325	97
	201	271
	42	145
	100	215
	193	99
	311	123

For Human genome U95 B array
[RefSeq ID: NM_005843.4 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
43149_at	348	567
	254	411
	202	449
	497	251
	353	353
	389	301
	496	251
	360	323
	348	385
	161	545
	399	345
	406	225
	132	613
	203	449
	185	535
	627	283
50573_r_at	477	535
	486	561
	31	589
	569	57
	226	507
	153	637
	418	359
	290	407
	493	203
	508	525
	419	225
	566	583
	559	621
	560	331
	351	309
	595	115

For Human genome U95 C array
[RefSeq ID: NM_005843.4 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
60468_at	507	211
	408	335
	207	513
	511	523
	558	151
	130	603
	412	315
	612	115
	444	521
	444	615
	221	525
	361	553
	325	439
	527	183
	583	191
	506	233

For Human genome U95 D array
[RefSeq ID: NM_005843.4 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_005843.4 (Number of probes = 5)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
89803_at	358	183
	357	183
	247	215
	246	215
	242	437

For Human genome focus array
[RefSeq ID: NM_005843.4 (Number of probes = 10)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209649_at	249	79
	41	133
	27	419
	297	231
	387	79
	403	393
	279	275
	373	279
	104	329
	325	293

For HT Human genome U133 plus PM array
[RefSeq ID: NM_005843.4 (Number of probes = 18)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209649_PM_at	257	282
	572	25
	569	592
	49	332
	533	182
	63	204
	582	737
	686	299
	650	399
208194_PM_s_at	98	110
	167	729
	135	550
	348	460
	441	276
	204	99
	144	154
	194	50
	469	570

For HT human genome U133A array
[RefSeq ID: NM_005843.4 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215044_s_at	406	237
	132	91
	311	355
	381	25
	77	351
	229	361
	305	197
	225	207
	81	49
	574	133
	431	97
208194_s_at	465	1
	179	47
	528	589
	66	681
	655	213
	688	93
	210	535
	294	399
	241	413
	310	543
	485	111
209649_at	135	231
	206	469
	668	659
	41	489
	534	143
	506	391
	511	705
	560	377
	635	143
	1	619

For HT human genome U133B array
[RefSeq ID: NM_005843.4 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228254_at	58	654
	566	38
	473	78
	156	662
	652	604
	142	38
	278	316
	394	14
	693	422
	18	442
	618	674
242569_at	454	626
	191	526
	395	264
	489	420
	308	450
	598	326
	485	344
	162	498
	267	702
	381	112
	34	496

For U133 X3P array
[RefSeq ID: NM_005843.4 (Number of probes = 69)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:g5032126_3p_a_at	200	51
	381	365
	859	11
	544	825
	358	803
	225	615
	813	169
	1084	971
	266	1013
	713	421
	287	361
probe:U133_X3P:Hs.123778.0.A1_3p_at	292	465
	818	675
	1134	909
	965	1113
	404	999
	67	835
	1118	1029
	1058	379
	286	329
	322	575
	566	253
probe:U133_X3P:g6599205_3p_at	655	937
	1099	707
	736	517
	53	593
	1094	741
	695	959
	21	985
	761	15
	886	35
	852	241
probe:U133_X3P:Hs.114624.0.A1_3p_x_at	111	971
	796	189
	821	1113
	492	559
	1074	433
	936	397
	456	1043
	535	899
	233	425
	642	9
	799	147
probe:U133_X3P:Hs.114624.0.A1_3p_at	795	189
	536	899
	455	1043
	798	147
	820	1113
	1075	433
	491	559
	937	397
	964	771
	643	9
	110	971
probe:U133_X3P:g5032126_3p_x_at	545	825
	224	615
	201	51
	648	365
probe:U133_X3P:Hs.306650.0.S1_3p_s_at	769	763
	80	323
	544	281
	118	151
	932	141
	810	539
	877	221
	723	149
	961	109
	292	1023
	228	215