TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_021116.2 (Number of probes = 54)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213245_at	301	375
	993	411
	799	1041
	1123	227
	530	777
	591	235
	1083	207
	607	685
	260	165
	925	431
	797	1099
215348_at	63	809
	129	365
	81	853
	46	187
	897	525
	931	333
	1144	659
	34	201
	397	899
	300	759
	525	809
232062_at	1111	131
	229	327
	619	879
	679	119
	585	1045
	485	143
	965	1149
	60	567
	671	485
	258	473
	523	57
215340_at	168	757
	101	957
	265	1071
	12	889
	1118	143
	1017	553
	424	185
	328	905
	1097	749
	991	1031
	742	743
235049_at	1088	191
	635	945
	220	761
	1054	939
	301	1105
	221	201
	820	9
	702	867
	708	697
	58	39

For Human genome U133 A 2 array
[RefSeq ID: NM_021116.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213245_at	100	621
	361	655
	617	409
	351	237
	645	119
	614	91
	360	251
	108	465
	236	213
	671	115
	341	131
215348_at	381	103
	476	187
	219	509
	349	483
	97	317
	372	113
	263	481
	316	207
	533	451
	326	397
	475	517
215340_at	504	447
	653	571
	59	103
	559	619
	318	639
	633	529
	599	541
	462	79
	111	445
	273	333
	580	451

For Human genome U133 A array
[RefSeq ID: NM_021116.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213245_at	408	119
	244	423
	56	135
	424	95
	595	221
	308	479
	471	243
	55	125
	588	259
	183	677
	257	643
215348_at	165	97
	592	497
	617	193
	446	523
	367	497
	435	325
	706	207
	162	113
	130	467
	591	553
	400	409
215340_at	318	591
	87	557
	606	659
	186	549
	688	81
	512	639
	170	467
	313	107
	65	457
	59	461
	569	343

For Human genome U133 B array
[RefSeq ID: NM_021116.2 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
232062_at	26	77
	155	287
	568	35
	589	639
	522	193
	566	539
	391	69
	426	291
	701	71
	66	345
	90	703
235049_at	463	115
	84	677
	175	465
	309	577
	608	25
	492	111
	246	537
	148	7
	555	425
	288	579

For Human genome U95 Av2 array
[RefSeq ID: NM_021116.2 (Number of probes = 31)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
33353_at	266	1
	45	141
	248	143
	319	153
	85	499
	100	131
	57	143
	132	361
	56	125
	332	27
	374	23
	63	211
	134	19
	482	149
	100	145
	190	105
35580_at	392	563
	394	45
	422	37
	60	179
	373	199
	552	113
	157	95
	59	249
	182	5
	270	59
	537	121
	374	199
	393	45
	620	617
	279	279

For Human genome U95 B array
[RefSeq ID: NM_021116.2 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 C array
[RefSeq ID: NM_021116.2 (Number of probes = 15)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
61740_at	211	77
	13	5
	46	241
	22	123
	67	475
	18	33
	285	157
	126	419
	17	33
	77	201
	199	125
	43	389
	447	5
	37	27
	24	269

For Human genome U95 D array
[RefSeq ID: NM_021116.2 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_021116.2 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
67169_at	537	387
	197	91
	70	449
	606	607
	112	499
	15	381
	593	313
	55	355
	39	283
	265	189
	474	17
	130	305
	606	141
	531	501
	187	301
	114	209

For Human genome focus array
[RefSeq ID: NM_021116.2 (Number of probes = 0)]

No transcript specific probes found

For HT Human genome U133 plus PM array
[RefSeq ID: NM_021116.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213245_PM_at	546	0
	393	15
	586	628
	660	432
	236	60
	593	53
	702	400
	299	617
	339	39
	493	326
	730	300

For HT human genome U133A array
[RefSeq ID: NM_021116.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213245_at	298	141
	429	119
	465	285
	324	511
	495	639
	416	717
	276	443
	188	133
	494	257
	684	239
	496	159
215348_at	356	217
	604	229
	79	529
	211	431
	465	555
	65	353
	331	437
	589	51
	661	127
	241	529
	138	487
215340_at	63	591
	690	69
	320	691
	625	575
	28	625
	323	491
	250	487
	437	493
	174	669
	243	131
	492	367

For HT human genome U133B array
[RefSeq ID: NM_021116.2 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
232062_at	578	342
	234	80
	114	196
	291	546
	343	72
	678	644
	651	710
	728	34
	311	282
	88	86
	559	294
235049_at	132	430
	47	470
	38	114
	526	682
	677	24
	605	6
	339	540
	383	114
	285	582
	32	586

For U133 X3P array
[RefSeq ID: NM_021116.2 (Number of probes = 72)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.301663.0.A1_3p_at	667	973
	810	679
	388	411
	655	421
	580	267
	133	259
	1067	1087
	1007	237
	579	713
	598	637
	654	1063
probe:U133_X3P:Hs.271920.0.S1_3p_at	94	691
	870	927
	733	175
	563	849
	114	391
	795	395
	513	513
	355	339
probe:U133_X3P:Hs.282846.0.S1_3p_at	252	189
	970	919
	459	847
	826	63
	711	65
	652	887
	1023	557
	853	575
	1147	323
	905	691
	31	549
probe:U133_X3P:Hs.259768.0.S1_3p_at	865	631
	324	1111
	439	133
	25	571
	853	59
	573	869
	814	477
	552	837
	725	481
	705	875
	65	837
probe:U133_X3P:Hs.259768.0.A1_3p_at	1121	443
	947	871
	14	723
	194	595
	862	299
	392	707
	526	213
	854	697
	227	279
	348	207
	997	1001
probe:U133_X3P:Hs.259768.0.S1_3p_x_at	706	875
	852	59
	574	869
	248	783
	866	631
	64	837
	24	571
	1034	761
	323	1111
	562	629
	425	135
probe:U133_X3P:Hs.271920.0.S1_3p_x_at	512	513
	354	339
	734	175
	562	849
	115	391
	95	691
	655	229
	869	927
	847	791