TransSpProbes

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Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_006713.3 (Number of probes = 55)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212857_x_at	750	221
	1162	633
	624	515
	752	1125
	142	47
	842	273
	975	41
	1076	1001
	286	705
	120	231
	849	1045
221727_at	658	961
	960	579
	963	101
	981	19
	520	95
	769	289
	561	829
	791	915
	448	511
	387	389
	655	961
214512_s_at	598	185
	1112	621
	101	693
	713	507
	907	297
	730	131
	226	671
	355	117
	83	573
	315	339
	3	253
224587_at	716	777
	361	719
	847	1127
	850	159
	685	1069
	431	397
	445	365
	759	281
	26	333
	1020	33
	918	635
224586_x_at	850	1045
	531	545
	119	231
	1161	633
	285	705
	884	121
	623	515
	843	273
	354	117
	141	47
	146	633

For Human genome U133 A 2 array
[RefSeq ID: NM_006713.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
221727_at	322	575
	418	57
	52	349
	270	307
	647	547
	333	13
	417	495
	442	159
	37	575
	179	223
	363	53
212857_x_at	571	421
	419	151
	218	117
	100	627
	652	127
	730	381
	591	309
	727	23
	504	669
	133	27
	445	601
214512_s_at	142	75
	134	191
	576	403
	716	161
	7	67
	270	415
	310	305
	430	375
	334	117
	164	141
	333	345

For Human genome U133 A array
[RefSeq ID: NM_006713.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
221727_at	627	163
	117	13
	353	229
	665	359
	29	55
	88	511
	426	315
	447	565
	447	593
	478	593
	11	59
212857_x_at	662	687
	227	27
	635	435
	542	619
	535	131
	280	25
	299	127
	290	527
	304	155
	586	319
	76	405
214512_s_at	265	197
	166	121
	230	75
	66	67
	522	355
	466	387
	27	429
	702	143
	4	315
	71	415
	132	169

For Human genome U133 B array
[RefSeq ID: NM_006713.3 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
224587_at	78	239
	481	477
	38	387
	279	197
	5	219
	223	163
	468	653
	515	21
	477	691
	707	437
	702	93
224586_x_at	651	71
	585	135
	231	431
	421	379
	267	161
	497	383
	633	69
	380	331
	349	31
	304	311
	490	449

For Human genome U95 Av2 array
[RefSeq ID: NM_006713.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
36171_at	499	541
	473	329
	472	163
	241	413
	382	567
	300	395
	517	313
	516	253
	122	593
	554	161
	232	413
	121	593
	562	213
	368	545
	162	555
	112	601

For Human genome U95 B array
[RefSeq ID: NM_006713.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
51197_at	221	355
	220	355
	157	319
	230	327
	158	319
	247	273
	24	431
	72	621
	182	367
	470	109
	440	133
	89	541
	439	133
	162	355
	359	271
	244	223
48742_at	56	611
	584	121
	538	153
	632	7
	361	491
	265	521
	279	415
	192	421
	430	265
	330	303
	113	565
	213	387
	335	347
	214	387
	1	599
	292	393

For Human genome U95 C array
[RefSeq ID: NM_006713.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
64080_at	634	381
	143	593
	439	97
	82	307
	290	515
	8	351
	227	145
	30	533
	377	83
	511	181
	120	383
	472	567
	126	583
	326	81
	387	135
	330	89

For Human genome U95 D array
[RefSeq ID: NM_006713.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_006713.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_006713.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
214512_s_at	103	51
	157	127
	118	109
	204	225
	431	201
	14	47
	400	91
	93	263
	38	235
	158	73
	290	201

For HT Human genome U133 plus PM array
[RefSeq ID: NM_006713.3 (Number of probes = 9)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212857_PM_x_at	355	640
	406	198
	340	203
	463	460
	567	278
	74	529
	739	627
	40	243
	275	474

For HT human genome U133A array
[RefSeq ID: NM_006713.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
221727_at	483	251
	220	185
	287	77
	398	623
	559	585
	470	543
	660	615
	219	345
	522	81
	382	25
	189	359
212857_x_at	55	155
	323	717
	145	133
	622	655
	128	427
	372	345
	615	45
	411	181
	630	463
	505	41
	696	621
214512_s_at	418	443
	251	221
	1	459
	624	193
	574	87
	429	95
	155	343
	316	167
	500	141
	466	411
	402	385

For HT human genome U133B array
[RefSeq ID: NM_006713.3 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
224586_x_at	641	162
	589	134
	325	330
	361	72
	58	644
	503	434
	483	390
	707	310
	2	74
	734	404
	265	30
224587_at	545	94
	630	166
	60	660
	181	442
	625	22
	627	198
	286	390
	673	698
	250	236
	339	482
	263	218

For U133 X3P array
[RefSeq ID: NM_006713.3 (Number of probes = 53)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.74861.1.A1_3p_a_at	793	703
	52	1077
	445	653
	199	1075
	442	235
	668	717
	202	401
	85	819
	281	233
	984	1043
	350	447
probe:U133_X3P:Hs.74861.0.A3_3p_at	1044	109
	985	155
	936	945
	10	587
	352	327
	852	117
	629	1041
	444	21
	1027	695
	502	669
	946	315
probe:U133_X3P:Hs.74861.0.A2_3p_x_at	225	265
	659	673
	887	73
	543	1031
	614	39
	1025	1129
	527	917
	205	763
	612	399
	418	1093
	741	945
probe:U133_X3P:Hs.74861.0.A2_3p_a_at	851	987
	67	935
	297	1037
	724	901
	1024	1129
	206	763
	679	413
	456	997
	206	1157
probe:U133_X3P:Hs.74861.0.A2_3p_at	472	1089
	526	917
	611	399
	867	1129
	1019	1101
	1056	1061
	615	39
	799	1027
	252	403
	226	265
	61	1153