TransSpProbes

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Process data

Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_004096.4 (Number of probes = 45)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
1570454_at	604	1019
1570454_at	766	1139
224645_at	158	1161
	603	743
	426	277
	427	535
	1082	779
	278	657
	505	313
	1042	447
	809	357
	439	573
	105	999
224653_at	698	683
	976	999
	163	959
	151	97
	964	479
	458	313
	1159	1141
	937	875
	1025	1157
	1155	289
208769_at	72	647
	727	345
	810	59
	35	301
	708	947
	1005	1005
	343	879
	986	665
	801	481
	1070	331
	551	123
208770_s_at	765	751
	34	49
	7	759
	946	941
	291	811
	102	497
	180	355
	510	809
	1058	1097
	198	321
	104	1005

For Human genome U133 A 2 array
[RefSeq ID: NM_004096.4 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208769_at	15	289
	470	165
	164	389
	409	69
	566	399
	401	493
	500	187
	372	565
	450	603
	515	33
	372	195
208770_s_at	666	563
	14	625
	174	195
	526	655
	420	295
	571	447
	421	453
	679	25
	48	483
	271	483
	98	201

For Human genome U133 A array
[RefSeq ID: NM_004096.4 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208770_s_at	517	307
	377	467
	135	207
	704	641
	580	673
	536	463
	623	497
	115	499
	447	581
	553	25
	154	201
208769_at	213	71
	699	399
	140	623
	111	201
	348	171
	172	35
	328	297
	485	191
	218	585
	643	541
	299	413

For Human genome U133 B array
[RefSeq ID: NM_004096.4 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
224645_at	189	187
	499	163
	132	347
	557	269
	397	455
	625	709
	118	325
	541	481
	283	611
	671	399
	421	213
224653_at	341	415
	92	185
	132	709
	524	259
	408	539
	597	609
	112	59
	268	697
	286	585
	157	171

For Human genome U95 Av2 array
[RefSeq ID: NM_004096.4 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
35263_at	508	333
	291	561
	451	301
	402	555
	382	341
	417	341
	438	291
	410	549
	601	307
	530	409
	303	471
	490	467
	627	281
	637	263
	590	115
	419	549

For Human genome U95 B array
[RefSeq ID: NM_004096.4 (Number of probes = 47)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
58647_at	34	245
	34	277
	17	87
	525	121
	220	613
	375	33
	213	177
	577	217
	497	159
	49	19
	41	67
	25	241
	171	615
	158	99
	88	313
52706_at	311	347
	344	205
	301	319
	105	503
	335	313
	565	179
	184	459
	541	481
	212	541
	536	113
	451	299
	311	581
	394	155
	493	89
	417	501
	55	507
44817_at	551	245
	378	573
	196	579
	442	293
	530	443
	636	263
	552	245
	582	275
	531	443
	532	443
	520	295
	589	365
	176	607
	267	483
	441	293
	279	633

For Human genome U95 C array
[RefSeq ID: NM_004096.4 (Number of probes = 28)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
65476_at	341	347
	439	193
	451	211
	415	55
	348	389
	562	513
	128	381
	141	317
	584	69
	570	367
	23	163
	579	603
56645_at	151	375
	402	131
	162	457
	154	435
	624	219
	459	71
	299	295
	247	409
	455	275
	432	199
	253	393
	620	325
	266	329
	270	605
	533	313
	438	251

For Human genome U95 D array
[RefSeq ID: NM_004096.4 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_004096.4 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_004096.4 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208770_s_at	411	313
	28	197
	42	295
	393	1
	298	367
	442	423
	71	297
	221	133
	38	405
	44	315
	160	117

For HT Human genome U133 plus PM array
[RefSeq ID: NM_004096.4 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
1570454_PM_at	621	419
208769_PM_at	623	389
	714	84
	508	380
	205	284
	423	571
	179	388
	113	307
	541	281
	471	663
208770_PM_s_at	432	75
	561	299
	478	575
	185	421
	192	622
	714	598
	411	644
	507	512
	164	449
	88	284
	646	429

For HT human genome U133A array
[RefSeq ID: NM_004096.4 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208769_at	710	429
	584	443
	235	609
	680	209
	503	195
	515	537
	279	225
	475	657
	309	57
	131	91
	419	321
208770_s_at	518	669
	626	523
	483	225
	508	521
	666	577
	557	47
	186	499
	32	259
	646	475
	18	333
	369	209

For HT human genome U133B array
[RefSeq ID: NM_004096.4 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
224645_at	727	404
	582	324
	656	162
	725	458
	177	346
	664	616
	427	188
	287	212
	742	474
	494	712
	724	264
224653_at	236	188
	222	694
	3	716
	370	542
	40	422
	729	292
	414	172
	357	616
	524	60
	742	592

For U133 X3P array
[RefSeq ID: NM_004096.4 (Number of probes = 42)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:g13477190_3p_a_at	190	973
	948	583
	276	1023
	367	873
	930	745
	435	301
	1121	561
	213	681
	104	473
	921	647
	34	1025
probe:U133_X3P:Hs.278712.0.S3_3p_at	824	1055
	1149	1005
	831	321
	44	403
	836	885
	807	359
	1083	629
	694	141
	439	107
	653	291
	812	817
probe:U133_X3P:Hs.5233.0.A1_3p_at	480	941
	487	75
	1068	119
	712	571
	515	313
	1016	831
	887	1053
	121	801
	854	689
	917	189
	1068	401
probe:U133_X3P:Hs.5233.0.A2_3p_at	667	1025
	904	87
	1113	983
	1099	95
	571	433
	988	109
	948	953
	600	349
	754	515