TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_005234.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213354_s_at	151	171
	845	755
	403	813
	579	421
	515	463
	175	409
	991	489
	1145	249
	985	881
	241	319
	355	1129
209261_s_at	969	755
	466	495
	318	317
	459	429
	29	655
	512	409
	297	249
	1088	501
	788	655
	381	1109
	834	627
209262_s_at	1018	401
	884	335
	658	331
	647	809
	61	665
	472	189
	51	511
	248	255
	698	995
	806	1023
	596	799

For Human genome U133 A 2 array
[RefSeq ID: NM_005234.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213354_s_at	662	671
	671	137
	354	527
	471	291
	445	275
	277	431
	351	485
	137	95
	110	179
	307	235
	275	245
209261_s_at	425	301
	330	175
	137	375
	585	661
	438	393
	309	235
	492	295
	37	369
	177	139
	172	251
	215	395
209262_s_at	698	399
	426	185
	621	137
	20	231
	275	597
	255	483
	495	307
	299	187
	287	615
	36	105
	300	477

For Human genome U133 A array
[RefSeq ID: NM_005234.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213354_s_at	60	693
	252	251
	37	99
	9	243
	559	301
	167	543
	579	499
	411	183
	267	143
	455	465
	559	283
209261_s_at	441	679
	403	305
	41	407
	538	141
	116	405
	470	459
	155	257
	15	243
	376	179
	199	389
	187	311
209262_s_at	700	491
	592	143
	340	413
	219	111
	87	617
	590	235
	200	633
	560	315
	552	193
	314	177
	499	495

For Human genome U133 B array
[RefSeq ID: NM_005234.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 Av2 array
[RefSeq ID: NM_005234.3 (Number of probes = 61)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
41310_f_at	292	369
	383	187
	161	409
	559	119
	607	545
	575	587
	220	441
	109	475
	536	299
	410	269
	633	125
	42	577
	344	443
	4	543
1218_at	308	211
	288	301
	361	353
	593	409
	45	377
	139	499
	309	251
	319	211
	375	9
	403	53
	493	5
	379	49
	386	407
	45	383
	291	369
41311_f_at	147	493
	436	369
	582	59
	439	433
	533	203
	372	355
	455	179
	113	491
	440	433
	169	553
	56	551
	36	515
	544	195
	329	301
	308	317
	512	101
41312_r_at	231	585
	57	545
	617	385
	413	545
	372	351
	529	125
	494	379
	595	377
	266	475
	201	379
	409	355
	510	79
	516	107
	497	593
	162	483
	141	589

For Human genome U95 B array
[RefSeq ID: NM_005234.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
57829_s_at	303	121
	443	117
	442	117
	395	165
	594	381
	124	581
	444	117
	182	251
	177	411
	225	209
	412	273
	253	297
	270	281
	63	511
	225	477
	378	17

For Human genome U95 C array
[RefSeq ID: NM_005234.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
49275_g_at	237	381
	429	419
	555	529
	373	215
	552	93
	551	27
	441	379
	403	385
	499	77
	336	611
	2	627
	461	505
	337	611
	599	69
	38	579
	160	447

For Human genome U95 D array
[RefSeq ID: NM_005234.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_005234.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_005234.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209262_s_at	253	315
	417	93
	260	259
	402	125
	89	121
	149	389
	384	149
	302	397
	315	71
	135	311
	309	201

For HT Human genome U133 plus PM array
[RefSeq ID: NM_005234.3 (Number of probes = 29)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213354_PM_s_at	234	169
	433	187
	496	560
	71	186
	574	588
	602	675
	110	358
	500	191
	147	351
209262_PM_s_at	731	398
	461	103
	111	160
	727	271
	322	244
	503	69
	701	43
	205	743
	321	170
	403	567
	74	29
209261_PM_s_at	713	565
	638	263
	183	37
	194	171
	313	633
	637	242
	97	183
	484	550
	168	436

For HT human genome U133A array
[RefSeq ID: NM_005234.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213354_s_at	325	497
	635	329
	190	271
	78	207
	273	311
	681	517
	178	165
	274	725
	325	279
	316	117
	88	575
209261_s_at	671	435
	516	357
	512	433
	433	715
	568	333
	126	271
	120	337
	420	283
	153	169
	520	199
	41	419
209262_s_at	732	439
	220	343
	516	519
	169	217
	340	265
	456	207
	6	645
	424	161
	375	521
	692	125
	660	665

For HT human genome U133B array
[RefSeq ID: NM_005234.3 (Number of probes = 0)]

No transcript specific probes found

For U133 X3P array
[RefSeq ID: NM_005234.3 (Number of probes = 49)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:g12803666_3p_a_at	520	69
	1095	723
	948	125
	1147	453
	114	831
	622	1007
	390	181
	624	377
	24	217
	1108	287
	190	1007
probe:U133_X3P:209261_3p_s_at	912	651
	798	439
	752	651
	876	743
	1097	509
	856	347
	994	455
	400	517
	519	281
	920	629
	319	1101
probe:U133_X3P:Hs.239752.1.A1_3p_at	251	569
	1053	287
	410	979
	79	953
	1074	81
	371	935
	155	507
	501	889
	1047	153
	919	699
	570	903
probe:U133_X3P:Hs.239752.0.A1_3p_x_at	779	865
	681	187
	1129	81
	1117	809
	543	785
probe:U133_X3P:Hs.239752.0.A1_3p_a_at	1101	889
	1023	509
	1116	809
	1146	437
	353	183
	799	439
	778	865
	993	455
	966	783
	464	303
	601	311