TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_004486.4 (Number of probes = 47)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
35436_at	858	729
	309	123
	611	1103
	424	393
	673	363
	153	679
	594	961
	549	1107
	899	99
	1084	1065
	1029	423
	864	1119
	671	75
	645	401
	948	747
211059_s_at	940	437
	145	239
	899	87
	110	1019
	1064	483
	572	1119
	425	393
	224	547
	26	661
	42	563
225672_at	124	389
	1008	505
	481	567
	101	867
	1153	769
	59	469
	970	393
	1093	203
	796	927
	918	773
	600	431
204384_at	300	469
	297	1011
	12	339
	921	87
	145	415
	658	883
	790	619
	829	1093
	309	151
	1032	405
	332	301

For Human genome U133 A 2 array
[RefSeq ID: NM_004486.4 (Number of probes = 36)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
211059_s_at	294	667
	532	47
	416	313
	396	397
	524	611
	612	287
	417	325
	176	257
	24	133
	184	339
35436_at	180	231
	479	445
	487	665
	252	41
	25	207
	529	573
	523	637
	140	409
	147	437
	406	409
	603	55
	417	313
	455	657
	284	247
	359	23
204384_at	372	279
	250	167
	390	85
	110	527
	730	647
	495	231
	175	191
	282	241
	141	607
	200	49
	462	371

For Human genome U133 A array
[RefSeq ID: NM_004486.4 (Number of probes = 36)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
211059_s_at	594	321
	598	297
	576	339
	519	409
	275	51
	399	135
	556	263
	572	629
	37	349
	234	687
35436_at	195	679
	427	593
	283	73
	503	235
	584	433
	193	687
	618	437
	301	35
	344	205
	459	459
	627	421
	593	321
	168	659
	573	247
	508	57
204384_at	648	383
	61	197
	372	87
	290	249
	255	675
	625	49
	210	237
	103	545
	308	171
	548	287
	569	625

For Human genome U133 B array
[RefSeq ID: NM_004486.4 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
225672_at	636	473
	404	231
	585	283
	69	237
	500	259
	17	307
	136	479
	517	119
	447	531
	684	569
	61	343

For Human genome U95 Av2 array
[RefSeq ID: NM_004486.4 (Number of probes = 15)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
35436_at	626	317
	404	251
	611	607
	483	225
	419	473
	636	437
	458	93
	578	117
	156	479
	404	621
	517	49
	130	571
	475	435
	167	565
	127	519

For Human genome U95 B array
[RefSeq ID: NM_004486.4 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
50356_at	504	245
	357	615
	580	365
	323	297
	587	487
	110	605
	294	409
	346	377
	296	345
	111	605
	431	233
	513	287
	332	617
	434	267
	366	267
	300	547

For Human genome U95 C array
[RefSeq ID: NM_004486.4 (Number of probes = 1)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
62052_f_at	218	373

For Human genome U95 D array
[RefSeq ID: NM_004486.4 (Number of probes = 5)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
75263_at	219	37
	230	265
	404	249
	188	103
83955_at	304	487

For Human genome U95 E array
[RefSeq ID: NM_004486.4 (Number of probes = 26)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
70061_s_at	303	255
	113	583
	24	607
	248	373
	220	571
	550	369
	144	451
	508	47
	221	571
	229	431
	247	373
	92	619
	111	457
	475	259
	91	619
	402	311
70058_at	68	521
	45	591
	483	437
	172	427
	311	515
	480	481
	604	281
	146	391
	445	143
	181	409

For Human genome focus array
[RefSeq ID: NM_004486.4 (Number of probes = 15)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
35436_at	119	1
	58	267
	233	285
	241	431
	406	413
	158	163
	233	151
	436	37
	258	157
	68	427
	92	291
	62	31
	224	373
	412	135
	145	197

For HT Human genome U133 plus PM array
[RefSeq ID: NM_004486.4 (Number of probes = 17)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
204384_PM_at	364	216
	37	1
	577	216
	194	175
	3	87
	111	682
	497	722
	683	361
	696	118
211059_PM_s_at	654	172
	572	171
	144	94
	457	180
	442	547
	48	235
	311	32
	515	47

For HT human genome U133A array
[RefSeq ID: NM_004486.4 (Number of probes = 36)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
35436_at	678	227
	390	451
	283	481
	700	477
	614	279
	501	3
	505	255
	256	39
	312	81
	91	709
	585	327
	396	623
	617	73
	584	717
	56	695
211059_s_at	584	327
	338	9
	309	719
	583	363
	160	665
	701	375
	60	291
	192	325
	35	439
	670	9
204384_at	214	223
	555	409
	296	703
	692	657
	523	71
	445	577
	624	309
	17	195
	97	111
	406	261
	131	277

For HT human genome U133B array
[RefSeq ID: NM_004486.4 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
225672_at	496	258
	736	478
	623	536
	741	286
	76	344
	116	232
	43	308
	513	486
	478	570
	666	236
	434	120

For U133 X3P array
[RefSeq ID: NM_004486.4 (Number of probes = 52)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:g4758451_3p_s_at	613	281
	2	385
	90	1045
	316	427
	395	473
	931	1099
	760	1095
	227	1115
	584	1093
	775	179
probe:U133_X3P:Hs.24049.0.S1_3p_at	490	265
	497	729
	351	425
	1029	457
	343	809
	619	771
	1099	463
	204	407
	751	531
	101	979
	432	409
probe:U133_X3P:211059_3p_s_at	527	137
	292	523
	603	501
	314	999
	366	555
	919	461
	359	657
	812	571
	200	101
	226	1115
probe:U133_X3P:g13623544_3p_s_at	225	1115
	394	473
	758	1095
	89	1045
	315	427
	774	179
	1016	383
	930	1099
	585	1093
	612	281
probe:U133_X3P:204384_3p_at	231	101
	1051	1079
	389	429
	437	623
	1045	371
	871	447
	250	173
	1012	335
	736	487
	829	993
	810	863