TransSpProbes

Home

FAQs

Post question

Process data

Gene

Protein

Transcript

Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_013275.4 (Number of probes = 54)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238538_at	647	913
	960	593
	959	11
	775	543
	618	771
	548	621
	411	1053
	224	777
	943	737
	67	463
	608	473
234701_at	106	81
	245	495
	825	639
	361	505
	149	703
	47	191
	139	85
	663	57
	369	875
	1003	195
	267	441
227661_at	350	437
	667	315
	969	745
	1037	133
	1039	497
	240	495
	593	483
	327	295
	1020	317
	1102	965
	920	355
219437_s_at	425	639
	214	163
	595	1075
	108	163
	294	421
	841	637
	1093	465
	213	567
	246	347
	104	191
	494	163
231999_at	1067	691
	557	443
	763	837
	424	617
	428	173
	1143	885
	319	609
	361	679
	628	873
	1032	603

For Human genome U133 A 2 array
[RefSeq ID: NM_013275.4 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
219437_s_at	226	201
	84	93
	653	337
	289	91
	93	385
	279	383
	141	643
	562	107
	529	89
	630	275
	128	243

For Human genome U133 A array
[RefSeq ID: NM_013275.4 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
219437_s_at	540	79
	475	661
	165	251
	83	397
	650	393
	522	107
	267	207
	373	349
	269	95
	7	95
	663	281

For Human genome U133 B array
[RefSeq ID: NM_013275.4 (Number of probes = 43)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
234701_at	588	299
	205	111
	565	429
	442	537
	493	305
	455	37
	583	387
	255	265
	236	115
	664	49
	158	51
238538_at	437	285
	250	643
	669	277
	638	359
	673	473
	436	451
	261	9
	696	327
	506	561
	6	379
	362	473
227661_at	179	291
	562	77
	491	209
	507	589
	398	299
	184	301
	634	261
	172	189
	306	173
	403	187
	506	457
231999_at	53	503
	419	537
	639	421
	407	99
	460	545
	481	365
	452	373
	477	413
	517	265
	160	375

For Human genome U95 Av2 array
[RefSeq ID: NM_013275.4 (Number of probes = 4)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
2022_at	302	615
	195	617
	339	455
	310	465

For Human genome U95 B array
[RefSeq ID: NM_013275.4 (Number of probes = 25)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
42706_at	109	479
	312	75
	40	447
	16	431
	13	613
	433	423
	441	415
	326	139
	282	593
	225	499
	313	75
53950_at	342	469
	489	215
	577	495
	226	499
	347	253
	87	555
	324	615
	616	589
	590	533
	281	593
	525	191
	422	287
	442	415
	110	479

For Human genome U95 C array
[RefSeq ID: NM_013275.4 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
64481_at	560	541
	638	247
	415	559
	273	427
	156	517
	473	283
	472	587
	468	551
	534	385
	272	515
	477	475
	274	513
	505	629
	512	507
	504	477
	198	607

For Human genome U95 D array
[RefSeq ID: NM_013275.4 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
91711_at	79	509
	274	155
	146	253
	490	35
	366	563
	452	9
	390	463
	329	313
	105	597
	301	197
	224	289
	63	511
	422	195
	616	333
	83	587
	521	231

For Human genome U95 E array
[RefSeq ID: NM_013275.4 (Number of probes = 37)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
69584_at	346	491
	360	199
	44	145
	373	123
	274	535
	56	175
	248	187
	357	537
	87	41
75856_at	195	225
	281	475
	419	63
	287	199
	263	59
	428	153
	55	393
	93	483
	4	333
	14	363
	322	151
	630	35
	574	583
	488	419
	518	559
	61	479
69586_f_at	97	169
	131	65
	11	149
	132	65
	10	149
	84	47
	9	67
	268	53
	283	169
	212	269
	96	169
	235	125

For Human genome focus array
[RefSeq ID: NM_013275.4 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
219437_s_at	425	63
	140	161
	218	73
	9	133
	142	63
	379	249
	81	43
	62	179
	429	413
	76	223
	42	251

For HT Human genome U133 plus PM array
[RefSeq ID: NM_013275.4 (Number of probes = 0)]

No transcript specific probes found

For HT human genome U133A array
[RefSeq ID: NM_013275.4 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
219437_s_at	589	379
	646	417
	58	615
	116	301
	283	113
	704	81
	245	281
	95	427
	230	113
	372	127
	433	227

For HT human genome U133B array
[RefSeq ID: NM_013275.4 (Number of probes = 43)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238538_at	651	476
	50	384
	324	280
	220	288
	10	362
	557	8
	401	650
	347	456
	716	564
	372	328
	169	484
234701_at	99	306
	391	542
	63	300
	389	434
	497	394
	260	52
	252	112
	289	266
	76	34
	116	50
	576	114
227661_at	142	188
	139	176
	83	264
	546	76
	42	214
	454	292
	19	188
	62	302
	73	300
	452	460
	463	598
231999_at	96	370
	82	542
	287	268
	162	520
	590	426
	280	418
	212	378
	450	380
	49	550
	539	94

For U133 X3P array
[RefSeq ID: NM_013275.4 (Number of probes = 79)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.22116.4.A1_3p_x_at	764	487
	355	711
	642	723
	800	93
	424	827
	1128	665
	604	657
	692	627
	387	617
	776	1121
	168	1
probe:U133_X3P:Hs.42390.4.S1_3p_at	321	533
	270	815
	613	137
	563	649
	557	615
	1106	969
	1107	835
	848	509
	559	163
	1019	517
	470	149
probe:U133_X3P:Hs.199889.0.S1_3p_at	111	555
	1123	981
	407	1
	375	711
	612	771
	86	193
	749	35
	948	235
	399	1147
	610	707
	547	1037
probe:U133_X3P:Hs.22116.4.A1_3p_at	423	827
	169	1
	356	711
	651	865
	781	815
	1021	595
	527	285
	863	529
	603	657
	386	617
	1127	665
probe:U133_X3P:g7019448_3p_a_at	1003	1029
	1030	705
	258	271
	301	551
	162	641
	771	885
	542	941
	673	279
	286	779
	758	185
	612	795
probe:U133_X3P:Hs.42390.2.A1_3p_at	680	1139
	46	1159
	17	137
	161	857
	385	489
	49	501
	787	803
	439	981
	128	445
	327	863
	306	937
probe:U133_X3P:g337490_3p_x_at	1125	177
probe:U133_X3P:g337490_3p_x_at	822	399
probe:U133_X3P:Hs.22116.4.A1_3p_a_at	801	93
	284	185
	540	1123
	100	1091
	1048	187
	762	351
	39	353
	942	301
	456	401
	691	627
	537	837