TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_001561.5 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238950_at	865	787
	390	669
	615	489
	34	355
	769	551
	933	1071
	918	1063
	200	1143
	918	859
	303	815
	781	935
211786_at	61	1127
	611	469
	1130	519
	1046	389
	926	629
	62	923
	480	607
	13	295
	314	717
	697	345
	628	747
207536_s_at	911	303
	1157	451
	1123	25
	475	25
	1141	945
	717	109
	335	889
	390	545
	129	927
	10	119
	820	1011

For Human genome U133 A 2 array
[RefSeq ID: NM_001561.5 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
211786_at	68	447
	506	363
	131	429
	723	669
	418	163
	218	223
	95	381
	564	279
	556	195
	551	309
	148	553
207536_s_at	249	531
	468	15
	32	169
	291	61
	558	267
	65	547
	671	327
	238	569
	228	61
	489	603
	531	15

For Human genome U133 A array
[RefSeq ID: NM_001561.5 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
211786_at	433	165
	331	689
	585	229
	629	569
	688	375
	249	461
	411	319
	617	391
	475	443
	262	201
	156	289
207536_s_at	274	173
	20	63
	190	337
	545	275
	192	15
	459	571
	303	595
	323	15
	665	547
	195	585
	463	63

For Human genome U133 B array
[RefSeq ID: NM_001561.5 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238950_at	646	407
	210	295
	581	655
	84	651
	433	527
	604	211
	58	483
	90	335
	173	499
	54	699
	291	571

For Human genome U95 Av2 array
[RefSeq ID: NM_001561.5 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
31540_at	332	49
	18	195
	505	591
	403	1
	90	131
	49	441
	277	37
	183	253
	46	65
	315	127
	276	215
	61	61
	559	495
	396	37
	438	541
	3	415

For Human genome U95 B array
[RefSeq ID: NM_001561.5 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 C array
[RefSeq ID: NM_001561.5 (Number of probes = 15)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
60968_at	336	293
	334	389
	259	525
	412	507
	381	263
	511	387
	93	597
	590	225
	464	249
	386	277
	537	119
	334	583
	361	305
	587	633
	546	65

For Human genome U95 D array
[RefSeq ID: NM_001561.5 (Number of probes = 19)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
88261_r_at	459	23
	71	79
	348	159
	466	541
	266	153
	82	21
	477	471
	107	121
	37	43
	406	383
	214	59
88259_f_at	49	251
	331	283
	316	91
	318	223
	107	193
	54	39
	53	39
	42	133

For Human genome U95 E array
[RefSeq ID: NM_001561.5 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_001561.5 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
207536_s_at	439	357
	127	111
	233	177
	18	211
	287	389
	98	15
	207	343
	248	45
	176	43
	227	13
	222	367

For HT Human genome U133 plus PM array
[RefSeq ID: NM_001561.5 (Number of probes = 20)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
211786_PM_at	124	138
	172	484
	428	352
	488	354
	708	313
	737	645
	369	690
	374	467
	347	594
	266	195
	237	403
207536_PM_s_at	9	185
	716	553
	495	632
	408	123
	393	497
	166	328
	150	482
	614	701
	338	155

For HT human genome U133A array
[RefSeq ID: NM_001561.5 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
211786_at	169	731
	479	489
	431	189
	729	473
	43	225
	178	303
	649	347
	40	403
	209	605
	224	419
	300	249
207536_s_at	120	35
	340	659
	586	87
	34	303
	379	599
	663	187
	53	575
	591	619
	359	365
	633	31
	431	83

For HT human genome U133B array
[RefSeq ID: NM_001561.5 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238950_at	262	576
	43	334
	576	212
	166	662
	145	298
	461	532
	233	506
	638	706
	354	490
	176	414
	162	656

For U133 X3P array
[RefSeq ID: NM_001561.5 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:g5730094_3p_s_at	455	81
	539	489
	160	209
	913	211
	235	455
	977	867
	72	873
	666	375
	421	609
	383	1037
	710	485
probe:U133_X3P:g13623200_3p_at	747	833
	17	1
	877	777
	279	1027
	1060	499
	567	151
	960	755
	548	1153
	480	333
	778	911
	48	335
probe:U133_X3P:Hs.86447.0.A1_3p_at	439	389
	1083	525
	1140	93
	1155	1019
	475	563
	930	923
	478	551
	777	1067
	34	167
	61	1075
	822	325