TransSpProbes

Home

FAQs

Post question

Process data

Gene

Protein

Transcript

Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_002338.3 (Number of probes = 53)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
229244_at	39	629
	436	349
	747	343
	921	5
	873	817
	265	453
	54	1157
	751	271
	406	727
	95	711
	699	21
235111_at	933	111
	1094	1161
	502	179
	274	985
	1128	837
	604	187
	477	759
	687	519
	983	709
235494_at	162	1067
	859	1051
	1066	1013
	9	1099
	778	441
	187	811
	623	549
	98	567
	650	505
	634	847
	1016	5
228218_at	661	1099
	332	377
	172	181
	158	1003
	206	483
	169	551
	507	1079
	1082	933
	430	1145
	916	55
	730	63
214460_at	410	157
	414	185
	999	1141
	448	1029
	614	445
	732	129
	980	203
	124	481
	284	939
	812	95
	695	665

For Human genome U133 A 2 array
[RefSeq ID: NM_002338.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
214460_at	24	287
	482	671
	7	115
	648	103
	474	39
	195	89
	130	619
	346	71
	375	261
	169	561
	613	401

For Human genome U133 A array
[RefSeq ID: NM_002338.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
214460_at	464	637
	531	31
	316	117
	18	75
	481	413
	251	693
	134	297
	56	271
	161	107
	358	91
	278	579

For Human genome U133 B array
[RefSeq ID: NM_002338.3 (Number of probes = 42)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
229244_at	397	699
	535	15
	251	435
	166	381
	190	273
	192	445
	540	207
	44	503
	95	161
	417	3
	506	203
235111_at	126	67
	687	433
	501	709
	267	103
	41	467
	537	509
	553	313
	438	601
	421	109
228218_at	144	613
	483	667
	429	105
	46	573
	572	291
	155	225
	170	333
	87	41
	103	37
	650	701
	116	661
235494_at	439	621
	360	497
	97	345
	220	673
	297	3
	469	305
	84	521
	50	653
	391	333
	399	265
	701	643

For Human genome U95 Av2 array
[RefSeq ID: NM_002338.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
36256_at	132	373
	62	85
	517	497
	453	75
	232	287
	265	479
	465	99
	469	31
	94	151
	244	87
	3	47
	96	351
	625	43
	249	447
	221	23
	25	279

For Human genome U95 B array
[RefSeq ID: NM_002338.3 (Number of probes = 63)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
43930_at	270	45
	374	215
	500	545
	395	341
	88	253
	227	181
	465	95
	265	93
	449	75
	586	153
	622	593
	260	157
	427	99
	26	633
	24	331
	215	221
42983_at	34	605
	273	391
	404	401
	528	109
	173	535
	344	407
	588	125
	192	635
	93	527
	432	299
	627	525
	514	171
	506	187
	549	83
	590	287
52678_at	195	7
	286	3
	105	247
	91	45
	3	59
	11	127
	287	403
	32	219
	70	125
	34	511
	87	17
	122	473
	250	57
	91	49
	287	3
	272	349
42982_at	524	31
	201	129
	103	159
	29	71
	233	457
	71	115
	475	1
	120	65
	91	257
	289	175
	209	199
	23	373
	350	113
	2	147
	525	31
	143	359

For Human genome U95 C array
[RefSeq ID: NM_002338.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
58589_s_at	189	59
	389	137
	404	179
	199	215
	208	71
	142	123
	28	467
	55	469
	635	207
	86	339
	96	93
	138	53
	324	69
	15	219
	485	209
	196	345

For Human genome U95 D array
[RefSeq ID: NM_002338.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
91814_s_at	506	449
	453	413
	454	387
	388	599
	457	613
	455	387
	486	465
	437	517
	462	577
	234	567
	462	545
	455	413
	454	413
	326	475
	458	613
	325	475

For Human genome U95 E array
[RefSeq ID: NM_002338.3 (Number of probes = 26)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
69173_at	108	97
	82	493
	226	125
	434	437
	109	97
	45	121
	1	121
	242	181
	170	429
	622	7
	392	387
	50	87
	538	91
	85	347
	150	211
	52	469
81247_at	247	137
	220	367
	357	69
	241	511
	217	9
	264	309
	325	53
	99	439
	2	359
	584	65

For Human genome focus array
[RefSeq ID: NM_002338.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
214460_at	292	363
	389	41
	107	61
	108	3
	125	261
	122	189
	180	77
	290	399
	425	15
	323	63
	47	173

For HT Human genome U133 plus PM array
[RefSeq ID: NM_002338.3 (Number of probes = 0)]

No transcript specific probes found

For HT human genome U133A array
[RefSeq ID: NM_002338.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
214460_at	514	137
	627	101
	251	669
	688	323
	51	63
	482	95
	93	711
	477	113
	213	611
	413	297
	227	287

For HT human genome U133B array
[RefSeq ID: NM_002338.3 (Number of probes = 42)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
229244_at	45	14
	637	438
	582	208
	546	448
	558	708
	100	162
	720	4
	400	508
	395	274
	705	204
	294	388
235111_at	588	468
	743	504
	626	314
	692	104
	393	716
	566	608
	126	438
	48	68
	100	110
228218_at	111	106
	145	676
	287	664
	350	34
	167	248
	459	332
	144	578
	190	710
	99	226
	228	38
	413	618
235494_at	466	658
	152	334
	728	304
	102	676
	12	344
	311	502
	464	268
	406	624
	252	526
	422	4
	512	648

For U133 X3P array
[RefSeq ID: NM_002338.3 (Number of probes = 55)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.26479.0.A1_3p_at	340	955
	1065	165
	272	739
	972	149
	946	1119
	1116	633
	453	197
	390	265
	36	777
	1031	209
	1083	927
probe:U133_X3P:Hs.25231.0.A1_3p_at	1105	91
	297	975
	736	77
	901	1071
	606	649
	219	1001
	500	41
	1091	769
	205	1147
	998	349
	435	703
probe:U133_X3P:Hs.288405.1.A1_3p_at	433	595
	945	203
	1091	567
	607	783
	212	307
	165	825
	679	993
	829	801
	88	993
	914	1113
	366	1103
probe:U133_X3P:Hs.26409.0.S1_3p_at	899	731
	1111	385
	760	37
	978	1041
	7	63
	751	503
	319	1037
	974	855
	259	731
	1039	681
	455	1057
probe:U133_X3P:Hs.288405.0.A1_3p_at	988	393
	377	559
	1122	507
	38	807
	591	1139
	340	575
	629	521
	340	1053
	464	165
	928	425
	885	313