TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_005359.5 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
202527_s_at	907	163
	7	333
	509	273
	767	759
	93	1101
	2	673
	692	719
	1076	563
	725	633
	447	1121
	835	625
235725_at	762	661
	346	909
	966	25
	584	1001
	160	883
	481	457
	818	811
	544	817
	399	1091
	897	399
	264	265
202526_at	188	597
	274	1049
	910	167
	297	759
	151	223
	588	1115
	637	351
	29	249
	997	733
	844	1049

For Human genome U133 A 2 array
[RefSeq ID: NM_005359.5 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
202527_s_at	337	657
	205	339
	542	185
	349	151
	128	455
	326	375
	96	667
	48	93
	586	381
	688	429
	445	403
202526_at	429	629
	353	95
	345	357
	693	437
	624	137
	330	453
	639	193
	617	663
	611	625
	334	121

For Human genome U133 A array
[RefSeq ID: NM_005359.5 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
202527_s_at	203	193
	19	469
	365	95
	175	389
	273	391
	640	675
	365	155
	100	689
	184	283
	234	351
	574	413
202526_at	85	203
	688	683
	283	453
	684	467
	168	141
	572	97
	39	367
	224	649
	421	127
	474	649

For Human genome U133 B array
[RefSeq ID: NM_005359.5 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
235725_at	434	403
	365	501
	259	669
	477	557
	351	611
	698	543
	524	155
	348	19
	403	237
	424	273
	29	497

For Human genome U95 Av2 array
[RefSeq ID: NM_005359.5 (Number of probes = 48)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
36953_at	24	559
	175	609
	410	161
	536	135
	184	225
	198	401
	622	15
	128	247
	126	327
	143	417
	292	211
	277	323
	415	395
	274	607
	369	125
	310	485
510_g_at	251	365
	317	555
	260	563
	316	555
	253	635
	393	163
	94	545
	593	501
	46	455
	506	113
	296	319
	558	49
	327	337
	416	253
	84	525
	384	273
509_at	504	501
	289	519
	545	249
	299	261
	276	333
	492	133
	534	625
	605	465
	20	571
	179	393
	5	563
	235	223
	182	347
	141	373
	262	247
	99	421

For Human genome U95 B array
[RefSeq ID: NM_005359.5 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
46885_at	257	35
	256	35
	20	45
	181	1
	613	449
	257	341
	415	1
	64	607
	70	111
	174	39
	74	475
	101	129
	249	397
	601	589
	416	117
	215	95

For Human genome U95 C array
[RefSeq ID: NM_005359.5 (Number of probes = 31)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
57902_at	346	315
	95	35
	23	325
	127	69
	244	19
	297	129
	201	127
	178	9
	388	91
	127	107
	180	9
	134	317
	174	235
	296	161
	179	9
	488	157
58962_at	151	413
	413	71
	417	53
	200	201
	344	27
	362	31
	427	631
	14	435
	85	363
	365	111
	362	149
	86	311
	75	435
	217	139
	22	467

For Human genome U95 D array
[RefSeq ID: NM_005359.5 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
74813_at	282	345
	51	173
	372	45
	27	501
	230	3
	71	399
	44	357
	260	69
	340	17
	223	61
	222	61
	101	317
	501	631
	102	317
	50	173
	316	393

For Human genome U95 E array
[RefSeq ID: NM_005359.5 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_005359.5 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
202527_s_at	222	101
	204	247
	63	239
	324	275
	195	287
	328	123
	46	221
	136	431
	10	65
	283	425
	12	265

For HT Human genome U133 plus PM array
[RefSeq ID: NM_005359.5 (Number of probes = 20)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
202527_PM_s_at	395	541
	338	617
	162	504
	57	236
	99	634
	16	630
	258	247
	117	377
	696	592
	62	256
	357	30
202526_PM_at	126	239
	147	486
	444	354
	262	110
	585	386
	440	712
	414	620
	434	146
	704	445

For HT human genome U133A array
[RefSeq ID: NM_005359.5 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
202527_s_at	577	489
	516	715
	274	177
	146	117
	738	363
	121	689
	354	417
	522	413
	397	217
	499	467
	53	369
202526_at	419	673
	132	119
	213	149
	722	487
	193	213
	304	685
	731	165
	576	381
	14	485
	545	715

For HT human genome U133B array
[RefSeq ID: NM_005359.5 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
235725_at	557	510
	511	548
	98	238
	171	274
	366	408
	290	156
	373	614
	93	506
	144	502
	539	14
	226	674

For U133 X3P array
[RefSeq ID: NM_005359.5 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.75862.0.S2_3p_at	623	1039
	148	479
	987	251
	650	931
	969	1051
	479	395
	590	389
	221	603
	480	473
	892	851
probe:U133_X3P:Hs.50438.0.A1_3p_at	272	335
	647	933
	950	531
	404	377
	573	299
	521	889
	320	701
	16	841
	267	865
	923	335
	817	565
probe:U133_X3P:g4885456_3p_a_at	671	663
	851	1113
	73	913
	887	661
	467	713
	264	635
	224	301
	22	123
	228	899
	611	247
	859	851