TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_001669.3 (Number of probes = 38)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
230131_x_at	956	85
	1155	1021
	98	31
225280_x_at	86	761
225280_x_at	963	987
206831_s_at	176	773
	1017	1065
	800	117
	1121	427
	571	533
	709	133
	57	971
	394	385
	892	705
	954	413
	916	543
232423_at	1052	179
	573	883
	333	661
	1132	87
	164	411
	722	673
	204	897
	993	369
	1035	1021
	472	779
	368	137
225286_at	558	385
	409	1131
	75	1043
	914	683
	758	801
	1092	117
	1069	303
	519	157
	1121	151
	332	459
	549	443

For Human genome U133 A 2 array
[RefSeq ID: NM_001669.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
206831_s_at	686	633
	352	65
	683	73
	297	581
	346	219
	460	327
	512	249
	465	421
	127	239
	30	461
	223	321

For Human genome U133 A array
[RefSeq ID: NM_001669.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
206831_s_at	500	597
	703	255
	527	245
	55	77
	121	475
	136	225
	75	67
	10	657
	11	339
	499	435
	436	331

For Human genome U133 B array
[RefSeq ID: NM_001669.3 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
230131_x_at	591	13
	173	625
	443	49
225280_x_at	346	465
225280_x_at	195	605
225286_at	200	89
	372	91
	181	417
	44	277
	437	263
	150	231
	249	491
	115	639
	531	177
	361	71
	568	693
232423_at	526	219
	455	245
	224	551
	573	81
	545	625
	614	543
	55	477
	555	53
	233	403
	701	103
	584	407

For Human genome U95 Av2 array
[RefSeq ID: NM_001669.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
41568_at	532	219
	500	375
	169	591
	363	469
	610	263
	530	253
	377	537
	455	571
	405	471
	542	335
	520	567
	448	633
	496	301
	497	581
	415	439
	627	333

For Human genome U95 B array
[RefSeq ID: NM_001669.3 (Number of probes = 23)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
45286_at	207	541
	198	567
	471	325
	266	585
	291	481
	564	471
	564	421
	545	211
	391	501
	383	353
	253	603
	344	399
	308	611
	156	595
	424	633
	550	277
53066_at	264	249
	503	49
	324	243
	106	239
	260	67
	109	343
	458	143

For Human genome U95 C array
[RefSeq ID: NM_001669.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 D array
[RefSeq ID: NM_001669.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_001669.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
79846_at	45	33
	34	181
	36	311
	20	71
	243	97
	335	151
	64	563
	623	87
	297	625
	63	357
	91	119
	21	71
	19	77
	54	33
	478	431
	220	269

For Human genome focus array
[RefSeq ID: NM_001669.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
206831_s_at	441	377
	376	273
	417	51
	340	41
	417	215
	153	211
	229	299
	251	165
	173	409
	78	143
	394	157

For HT Human genome U133 plus PM array
[RefSeq ID: NM_001669.3 (Number of probes = 9)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
206831_PM_s_at	372	191
	386	282
	622	656
	609	144
	711	24
	288	716
	566	361
	489	509
	622	743

For HT human genome U133A array
[RefSeq ID: NM_001669.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
206831_s_at	108	367
	15	99
	334	505
	712	683
	636	243
	683	631
	222	347
	51	283
	127	465
	180	263
	469	23

For HT human genome U133B array
[RefSeq ID: NM_001669.3 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
230131_x_at	340	630
	83	54
	132	20
225280_x_at	110	468
225280_x_at	517	610
232423_at	67	198
	390	408
	693	630
	63	552
	663	54
	726	412
	477	548
	471	104
	28	82
	482	222
	711	480
225286_at	146	86
	179	72
	233	702
	535	268
	95	644
	608	230
	142	182
	564	420
	477	280
	34	92
	506	496

For U133 X3P array
[RefSeq ID: NM_001669.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:g4502238_3p_s_at	680	827
	230	629
	219	483
	1007	441
	1143	541
	962	153
	588	445
	237	555
	242	877
	116	641
	811	423
probe:U133_X3P:Hs.19978.5.S2_3p_at	112	833
	214	301
	1104	1127
	673	563
	458	417
	971	133
	1089	99
	412	139
	162	341
	867	97
	233	423
probe:U133_X3P:Hs.307755.0.S1_3p_at	135	167
	280	511
	345	517
	380	423
	373	477
	454	239
	299	157
	1002	955
	839	525
	1030	887
	384	1059