TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_006197.3 (Number of probes = 60)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209996_x_at	390	397
	778	843
	583	707
	218	859
	158	315
	945	671
	804	1161
	748	893
	802	873
	417	605
	263	923
202174_s_at	726	1095
	30	555
	4	565
	1025	77
	371	867
	328	139
	280	1027
	556	593
	541	1153
	214	301
	427	503
214118_x_at	688	687
	1041	801
	979	63
	181	719
	503	935
	474	379
	4	1017
	924	383
228905_at	258	1153
	1115	639
	849	877
	928	21
	174	497
	740	627
	849	615
	1054	807
	1139	1085
	235	1033
	951	43
214937_x_at	29	555
	1042	801
	180	719
	687	687
	3	565
	296	347
	372	867
	749	573
	502	935
	980	63
209997_x_at	1114	1021
	612	519
	835	471
	892	981
	343	523
	517	233
	768	241
	900	277
	1139	765

For Human genome U133 A 2 array
[RefSeq ID: NM_006197.3 (Number of probes = 49)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209996_x_at	528	503
	331	173
	548	363
	374	227
	173	521
	662	687
	478	551
	690	403
	116	513
	283	535
	501	421
214118_x_at	716	411
	216	479
	576	35
	145	431
	381	559
	410	215
	569	217
	99	605
202174_s_at	496	653
	91	685
	255	339
	595	517
	209	301
	109	167
	713	613
	722	331
	494	77
	579	355
	174	43
214937_x_at	184	195
	254	339
	144	431
	575	35
	215	479
	723	331
	380	559
	717	411
	22	345
	596	517
209997_x_at	359	311
	672	313
	514	133
	604	587
	24	281
	4	125
	718	613
	581	455
	61	153

For Human genome U133 A array
[RefSeq ID: NM_006197.3 (Number of probes = 49)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209996_x_at	438	417
	151	551
	623	373
	173	181
	693	233
	489	569
	496	437
	260	709
	88	531
	93	539
	24	521
214118_x_at	87	629
	106	37
	493	223
	530	425
	658	221
	374	493
	698	443
	127	577
202174_s_at	322	45
	288	701
	546	533
	611	311
	237	351
	37	365
	360	343
	593	633
	603	169
	6	671
	139	79
214937_x_at	128	577
	663	355
	699	443
	359	343
	545	533
	398	201
	236	351
	531	425
	107	37
	375	493
209997_x_at	371	321
	622	631
	618	323
	264	133
	686	289
	696	471
	689	605
	575	157
	405	137

For Human genome U133 B array
[RefSeq ID: NM_006197.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228905_at	351	389
	329	375
	569	633
	468	287
	650	495
	188	29
	539	15
	532	705
	54	541
	450	661
	532	381

For Human genome U95 Av2 array
[RefSeq ID: NM_006197.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
36682_at	243	589
	627	395
	2	577
	501	205
	506	85
	554	1
	364	215
	596	77
	588	249
	70	625
	223	485
	351	241
	142	417
	480	105
	96	635
	369	265

For Human genome U95 B array
[RefSeq ID: NM_006197.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
51300_s_at	78	487
	56	467
	130	293
	77	487
	550	53
	351	359
	358	149
	189	279
	358	43
	154	371
	115	491
	1	495
	341	197
	110	393
	64	553
	55	467

For Human genome U95 C array
[RefSeq ID: NM_006197.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 D array
[RefSeq ID: NM_006197.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_006197.3 (Number of probes = 39)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
77262_at	192	485
	249	631
	569	111
	574	295
	475	423
	620	355
	110	567
	591	231
	200	539
	211	577
	148	493
	40	603
	602	401
	191	485
	285	589
	193	485
73078_s_at	430	253
	273	467
	220	205
	142	299
	141	299
	158	309
	78	407
	124	451
	455	173
	453	119
	558	327
	103	415
	324	155
	382	485
	385	215
	220	293
76161_r_at	373	17
	182	307
	266	133
	228	185
	33	463
	486	85
	401	147

For Human genome focus array
[RefSeq ID: NM_006197.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
202174_s_at	421	197
	329	53
	145	217
	107	431
	152	385
	303	31
	34	233
	53	111
	330	1
	356	217
	312	337

For HT Human genome U133 plus PM array
[RefSeq ID: NM_006197.3 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209997_PM_x_at	337	631
	374	657
	568	572
	252	259
	318	152
	615	164
	286	537
	527	172
	420	17
209996_PM_x_at	246	382
	323	80
	581	284
	654	629
	351	96
	462	615
	144	144
	449	544
	363	606
202174_PM_s_at	158	501
	178	357
	575	178
	658	70
	27	510
	263	133
	653	467
	652	427
	85	538

For HT human genome U133A array
[RefSeq ID: NM_006197.3 (Number of probes = 49)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209996_x_at	487	447
	248	461
	534	577
	410	203
	547	515
	518	601
	722	559
	69	739
	505	565
	332	253
	392	401
202174_s_at	566	563
	722	657
	301	387
	585	715
	693	65
	691	97
	226	345
	120	735
	396	369
	458	329
	233	193
214118_x_at	297	611
	639	469
	208	525
	306	247
	536	235
	501	455
	144	655
	268	59
214937_x_at	128	227
	192	387
	500	455
	267	59
	296	611
	207	525
	395	369
	225	345
	640	469
	565	563
209997_x_at	72	351
	583	665
	242	347
	97	641
	381	179
	74	153
	180	301
	286	157
	320	501

For HT human genome U133B array
[RefSeq ID: NM_006197.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228905_at	344	638
	171	16
	180	388
	395	28
	40	546
	474	378
	395	668
	18	288
	32	714
	59	396
	56	502

For U133 X3P array
[RefSeq ID: NM_006197.3 (Number of probes = 44)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.315478.0.S1_3p_s_at	497	865
	258	1003
	521	329
	1008	609
	398	905
	391	567
	720	661
	221	701
	48	667
	447	735
	730	1081
probe:U133_X3P:Hs.75737.1.S1_3p_a_at	207	1153
	1135	729
	97	679
	358	683
	906	457
	409	193
	774	979
	323	843
	451	1025
	102	1059
	894	361
probe:U133_X3P:Hs.155272.0.A1_3p_at	836	173
	867	315
	640	1149
	485	517
	428	519
	335	989
	776	407
	564	1023
	330	1037
	590	25
	46	747
probe:U133_X3P:g5453855_3p_a_at	608	795
	365	505
	438	49
	663	593
	411	717
	315	417
	768	409
	1120	663
	705	753
	657	643
	865	267