TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_000922.3 (Number of probes = 44)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
222317_at	527	53
	93	221
	362	41
	961	21
	276	1123
	654	861
	781	203
	859	595
	833	597
	703	1123
	19	1133
208591_s_at	602	979
	704	777
	635	973
	388	1143
	774	501
	640	1013
	752	179
	1082	827
	1008	1001
	215	127
	1138	223
214582_at	613	173
	30	21
	480	1097
	640	1089
	1154	875
	473	1009
	198	391
	938	1065
	573	553
	674	293
	80	459
231276_at	483	907
	1009	871
	158	491
	926	409
	238	91
	971	131
	950	987
	1009	299
	205	133
	860	501
	35	509

For Human genome U133 A 2 array
[RefSeq ID: NM_000922.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
222317_at	401	667
	378	23
	471	357
	367	359
	331	111
	637	673
	159	669
	210	515
	364	121
	76	15
	515	31
214582_at	561	655
	240	223
	118	269
	163	97
	374	333
	287	523
	300	639
	564	161
	399	605
	384	13
	426	651
208591_s_at	524	299
	22	587
	527	101
	257	71
	65	125
	93	601
	76	609
	170	679
	245	495
	588	463
	57	583

For Human genome U133 A array
[RefSeq ID: NM_000922.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
222317_at	74	371
	242	689
	456	25
	249	677
	255	531
	180	365
	61	125
	337	31
	145	117
	80	15
	454	695
208591_s_at	332	477
	343	509
	687	699
	226	73
	328	605
	313	627
	16	603
	658	125
	456	311
	451	103
	460	619
214582_at	355	343
	443	229
	590	657
	393	675
	541	165
	522	669
	48	281
	484	13
	52	541
	453	101
	226	625

For Human genome U133 B array
[RefSeq ID: NM_000922.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
231276_at	254	303
	130	55
	589	77
	12	557
	639	535
	498	245
	652	173
	497	603
	134	297
	19	309
	100	77

For Human genome U95 Av2 array
[RefSeq ID: NM_000922.3 (Number of probes = 24)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
35872_at	246	241
	406	197
	94	493
	251	491
	424	397
	297	191
	127	463
	241	345
	426	527
	481	105
	60	537
	433	125
746_at	621	253
	613	519
	578	469
	552	465
	508	443
	634	399
	566	235
	560	557
	604	353
	519	463
	471	299
	346	459

For Human genome U95 B array
[RefSeq ID: NM_000922.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
43859_g_at	503	225
	402	523
	485	251
	404	265
	285	541
	27	375
	67	577
	203	193
	56	443
	73	309
	242	21
	486	85
	132	309
	300	113
	561	307
	233	183

For Human genome U95 C array
[RefSeq ID: NM_000922.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 D array
[RefSeq ID: NM_000922.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_000922.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
81314_r_at	422	85
	367	131
	63	581
	224	459
	571	161
	443	101
	114	355
	637	509
	170	235
	423	637
	112	249
	67	309
	392	185
	258	63
	545	569
	391	181
84101_at	115	203
	179	361
	98	423
	240	439
	352	103
	169	157
	585	131
	252	123
	4	409
	498	15
	274	247
	447	5
	94	443
	273	247
	444	113
	391	75

For Human genome focus array
[RefSeq ID: NM_000922.3 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208591_s_at	241	199
	371	391
	233	83
	372	435
	381	301
	17	323
	208	381
	222	49
	259	395
	282	63
	351	377
214582_at	359	67
	102	107
	224	395
	22	421
	223	219
	75	145
	258	341
	310	179
	71	415
	167	425
	164	13

For HT Human genome U133 plus PM array
[RefSeq ID: NM_000922.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208591_PM_s_at	565	412
	591	232
	617	345
	415	146
	651	542
	691	597
	451	412
	330	313
	450	135
	62	306
	227	43

For HT human genome U133A array
[RefSeq ID: NM_000922.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
222317_at	509	699
	727	71
	144	723
	108	29
	572	395
	238	563
	424	139
	95	39
	412	17
	126	715
	692	393
208591_s_at	165	661
	81	541
	33	129
	53	655
	152	735
	706	143
	545	327
	220	633
	362	93
	607	497
	400	635
214582_at	622	371
	456	715
	523	655
	132	697
	162	567
	527	123
	296	253
	736	189
	62	303
	642	673
	499	29

For HT human genome U133B array
[RefSeq ID: NM_000922.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
231276_at	378	54
	128	178
	228	610
	224	78
	512	540
	613	308
	732	556
	336	298
	374	78
	85	246
	445	304

For U133 X3P array
[RefSeq ID: NM_000922.3 (Number of probes = 77)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.150741.1.A1_3p_x_at	655	633
	183	335
	243	389
	833	171
	363	149
	299	629
	515	165
	1084	951
	644	969
	272	547
	691	151
probe:U133_X3P:Hs.150741.1.A1_3p_at	242	389
	514	165
	646	969
	600	355
	365	149
	656	633
	545	547
	1061	449
	1085	951
	693	151
	352	151
probe:U133_X3P:g4505660_3p_s_at	125	9
	460	883
	894	467
	941	221
	971	573
	146	965
	417	635
	548	559
	27	1141
	896	335
	52	1047
probe:U133_X3P:Hs.118567.0.A1_3p_at	675	247
	783	49
	1142	599
	759	603
	306	493
	955	67
	745	181
	156	1107
	898	1073
	661	413
	89	65
probe:U133_X3P:Hs.150741.3.S2_3p_at	238	17
	114	1077
	243	225
	517	1069
	978	691
	80	379
	950	1133
	678	645
	887	405
	722	385
	288	987
probe:U133_X3P:g4505660_3p_at	252	423
	667	187
	933	151
	1015	537
	1132	239
	301	447
	677	863
	250	507
	614	169
	213	357
	831	619
probe:U133_X3P:208591_3p_s_at	322	959
	912	771
	922	983
	348	205
	920	517
	518	817
	28	1141
	802	255
	1041	995
	1034	143
	217	963