TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_006252.3 (Number of probes = 51)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238489_at	97	15
	214	711
	754	1
	751	819
	845	217
	517	433
	316	1077
	899	757
	791	1115
	535	411
	694	749
207709_at	145	647
	387	25
	1114	1037
	195	689
	567	43
	312	15
	697	397
227892_at	173	239
	31	337
	807	73
	580	645
	743	553
	767	277
	666	273
	104	845
	140	599
	476	563
	596	471
240349_at	48	751
	557	895
	42	1065
	1128	1071
	866	89
	486	555
	73	821
	442	209
	1081	229
	61	155
	11	1149
238441_at	312	1045
	924	1131
	823	687
	36	51
	853	1131
	236	63
	622	535
	207	931
	1132	219
	422	179
	412	563

For Human genome U133 A 2 array
[RefSeq ID: NM_006252.3 (Number of probes = 7)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
207709_at	331	621
	54	329
	651	231
	558	9
	545	387
	666	13
	540	15

For Human genome U133 A array
[RefSeq ID: NM_006252.3 (Number of probes = 7)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
207709_at	362	1
	208	11
	510	423
	329	15
	490	643
	537	239
	410	401

For Human genome U133 B array
[RefSeq ID: NM_006252.3 (Number of probes = 44)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238489_at	105	685
	213	3
	572	459
	456	127
	545	433
	14	247
	130	503
	558	659
	303	11
	656	463
	88	261
227892_at	271	363
	373	199
	68	141
	673	335
	631	393
	76	47
	663	519
	70	285
	426	159
	628	341
	212	163
240349_at	69	703
	306	337
	507	653
	339	651
	163	461
	342	135
	460	503
	258	121
	200	545
	450	53
	156	91
238441_at	33	343
	317	693
	622	39
	260	561
	456	693
	611	103
	150	325
	340	33
	582	127
	598	639
	167	419

For Human genome U95 Av2 array
[RefSeq ID: NM_006252.3 (Number of probes = 12)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
186_at	567	383
	571	577
	474	433
	549	587
	562	211
	367	615
	189	597
	457	317
	438	509
	402	343
	637	193
	517	359

For Human genome U95 B array
[RefSeq ID: NM_006252.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
41929_at	352	507
	346	391
	278	623
	604	343
	429	417
	427	521
	342	399
	347	391
	366	597
	285	621
	505	305
	500	415
	443	471
	286	621
	462	315
	417	359
57820_r_at	11	147
	45	175
	14	87
	229	63
	132	109
	131	109
	46	175
	1	275
	80	33
	201	587
	209	323
	377	429
	299	17
	230	63
	396	67
	43	345

For Human genome U95 C array
[RefSeq ID: NM_006252.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
54326_at	158	247
	1	441
	321	123
	320	123
	299	151
	109	237
	310	5
	332	149
	259	107
	174	225
	323	57
	389	129
	260	209
	254	103
	140	141
	253	251

For Human genome U95 D array
[RefSeq ID: NM_006252.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_006252.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
90088_at	450	253
	468	257
	574	151
	575	193
	494	267
	498	291
	626	243
	501	501
	347	565
	274	617
	609	305
	319	463
	401	627
	637	497
	593	557
	603	119
82810_at	198	315
	292	225
	592	67
	294	107
	378	139
	429	1
	544	581
	195	273
	470	585
	119	347
	368	385
	147	163
	200	143
	150	527
	459	443
	119	191

For Human genome focus array
[RefSeq ID: NM_006252.3 (Number of probes = 7)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
207709_at	311	249
	57	401
	304	13
	423	265
	359	5
	171	153
	345	11

For HT Human genome U133 plus PM array
[RefSeq ID: NM_006252.3 (Number of probes = 5)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
207709_PM_at	420	517
	277	541
	610	645
	46	645
	58	33

For HT human genome U133A array
[RefSeq ID: NM_006252.3 (Number of probes = 7)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
207709_at	169	427
	150	19
	423	455
	268	657
	312	3
	284	267
	248	33

For HT human genome U133B array
[RefSeq ID: NM_006252.3 (Number of probes = 44)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238489_at	264	2
	520	258
	68	464
	254	246
	510	688
	409	468
	668	8
	363	438
	327	664
	507	508
	727	126
227892_at	213	524
	506	200
	331	140
	105	400
	484	342
	488	336
	527	286
	205	162
	521	162
	99	366
	388	44
240349_at	505	90
	174	464
	740	508
	264	712
	121	550
	69	136
	24	338
	54	124
	595	656
	6	54
	367	662
238441_at	393	572
	423	342
	215	702
	40	702
	547	38
	231	104
	539	642
	662	128
	642	324
	728	422
	248	32

For U133 X3P array
[RefSeq ID: NM_006252.3 (Number of probes = 61)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.127301.0.A1_3p_at	902	571
	41	85
	38	231
	413	543
	420	1113
	76	357
	119	647
	1131	563
	147	313
	840	841
	945	307
probe:U133_X3P:Hs.86379.0.A1_3p_x_at	874	697
	973	57
	440	205
	440	387
	863	249
	1087	931
	268	1017
	35	693
	498	573
	433	613
	406	1127
probe:U133_X3P:Hs.145568.0.A1_3p_at	721	565
	522	283
	890	1155
	910	105
	141	761
	218	19
	746	389
	265	111
	1156	175
	799	967
	346	1087
probe:U133_X3P:Hs.139293.0.S1_3p_at	65	17
	474	451
	1135	743
	431	745
	305	113
	874	751
	188	459
	500	165
	761	591
	968	559
	340	369
probe:U133_X3P:Hs.86379.0.A1_3p_at	974	57
	844	1119
	267	1017
	34	693
	864	249
	499	573
	407	1127
	441	387
	1088	931
	1044	621
	439	205
probe:U133_X3P:g5453965_3p_at	215	733
	340	1071
	652	1033
	604	47
	66	1023
	781	1041