TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_001204.6 (Number of probes = 50)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
1555071_at	97	919
	414	717
	395	1101
	948	879
	268	669
	215	1161
	921	1023
	329	907
	679	561
	409	837
	140	591
238516_at	298	287
	911	171
	464	45
	416	175
	435	1111
	652	1021
225144_at	634	109
	913	401
	192	511
	997	375
	349	725
	173	1137
	19	189
	485	305
	364	697
	510	1067
	909	1043
232431_at	860	679
	756	1021
	601	1145
	958	575
	960	137
	160	511
	150	233
	799	211
	137	709
	54	43
	436	29
239118_at	995	1081
	366	971
	634	735
	37	763
	870	351
	1121	601
	465	1017
210214_s_at	934	151
	969	1017
	321	293
	768	1135
	872	425
	760	917
	856	229
	903	383
	914	161
	117	25
	1087	661
209920_at	922	297
	747	265
	197	819
	1107	757
	175	311
	593	631
	242	905
	58	327
	451	857
	317	559
	770	567
231873_at	1021	353
	529	693
	165	633
	471	201
	901	1047
	794	221
	409	63
	309	747
	499	337
	716	529
	130	739

For Human genome U133 A 2 array
[RefSeq ID: NM_001204.6 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
210214_s_at	661	1
	197	611
	146	399
	363	671
	529	247
	223	219
	573	159
	358	91
	377	549
	572	85
	470	127
209920_at	518	337
	725	181
	517	379
	459	341
	206	539
	255	453
	332	147
	617	163
	128	173
	436	511
	251	489

For Human genome U133 A array
[RefSeq ID: NM_001204.6 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
210214_s_at	211	95
	486	255
	471	131
	84	631
	386	165
	456	565
	513	13
	431	409
	93	699
	553	225
	119	85
209920_at	429	347
	539	467
	3	505
	396	151
	369	351
	297	169
	164	177
	345	391
	6	189
	269	527
	57	559

For Human genome U133 B array
[RefSeq ID: NM_001204.6 (Number of probes = 28)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238516_at	78	31
	222	169
	542	623
	678	101
	163	681
	249	101
225144_at	400	695
	561	109
	528	425
	450	443
	363	651
	478	639
	12	241
	31	309
	597	205
	116	179
	420	65
232431_at	371	81
	255	307
	685	123
	368	137
	408	27
	29	703
	111	349
	60	21
	38	415
	400	625
	177	433
239118_at	674	447
	320	663
	498	467
	105	621
	530	365
	31	205
	643	591
231873_at	214	39
	75	211
	705	129
	263	321
	582	467
	618	421
	161	639
	377	115
	436	457
	659	199
	296	375

For Human genome U95 Av2 array
[RefSeq ID: NM_001204.6 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
39998_at	27	63
	172	39
	295	75
	33	173
	84	247
	243	163
	120	195
	29	273
	94	85
	235	5
	311	223
	104	347
	274	195
	178	211
	108	271
	75	307

For Human genome U95 B array
[RefSeq ID: NM_001204.6 (Number of probes = 15)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
58033_at	306	259
	373	181
	577	81
	614	79
	28	627
	387	547
	386	465
	452	627
	31	617
	434	187
	58	505
	572	369
	356	209
	518	345
	325	203
	217	545
55937_at	22	195
	106	197
	458	383
	225	89
	38	185
	132	115
	449	91
	396	99
	45	279
	284	297
	45	379
	111	173
	123	335
	39	505
	273	291
44148_at	98	171
	274	99
	236	143
	117	41
	222	239
	78	399
	533	169
	91	249
	210	219
	83	71
	144	379
	260	195
	342	101
	554	313
	214	327
	84	237

For Human genome U95 C array
[RefSeq ID: NM_001204.6 (Number of probes = 30)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
51825_r_at	85	557
	70	485
	489	85
	457	159
	552	197
	284	161
	232	367
	473	173
	335	171
	470	119
	573	573
	358	259
	63	443
	123	339
	153	313
	492	67
53744_at	453	313
	153	557
	379	83
	273	239
	427	69
	532	293
	344	391
	331	55
	83	439
	275	437
	478	605
	397	159
	586	153
	404	81

For Human genome U95 D array
[RefSeq ID: NM_001204.6 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
76926_at	157	111
	33	335
	118	309
	34	335
	139	167
	63	559
	14	331
	20	5
	148	231
	93	123
	166	251
	380	173
	5	31
	204	81
	12	603
	265	223

For Human genome U95 E array
[RefSeq ID: NM_001204.6 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
89346_at	593	587
	551	123
	505	319
	169	533
	203	529
	589	167
	280	627
	293	605
	609	445
	164	551
	501	347
	448	255
	432	349
	400	473
	295	613
	126	547

For Human genome focus array
[RefSeq ID: NM_001204.6 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209920_at	267	97
	60	349
	285	113
	340	223
	326	121
	124	245
	93	293
	102	297
	410	317
	318	221
	38	109

For HT Human genome U133 plus PM array
[RefSeq ID: NM_001204.6 (Number of probes = 18)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209920_PM_at	325	211
	120	613
	205	468
	564	248
	131	678
	672	87
	459	145
	200	514
	685	348
210214_PM_s_at	25	195
	663	559
	200	280
	337	527
	697	417
	353	612
	33	489
	677	540
	624	421
1555071_PM_at	499	401
	679	281
	174	262
	485	643
	223	203
	636	721
	487	390
	189	456
	514	303

For HT human genome U133A array
[RefSeq ID: NM_001204.6 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
210214_s_at	325	249
	453	155
	78	599
	47	441
	445	191
	665	27
	257	661
	61	71
	674	109
	55	279
	127	599
209920_at	537	213
	498	175
	202	555
	407	419
	84	197
	578	489
	395	585
	604	525
	197	195
	294	383
	686	187

For HT human genome U133B array
[RefSeq ID: NM_001204.6 (Number of probes = 28)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
238516_at	227	102
	6	686
	644	628
	456	170
	162	102
	655	28
225144_at	120	448
	541	118
	505	240
	627	644
	520	656
	421	704
	223	68
	347	102
	68	430
	398	224
	236	310
232431_at	275	710
	544	628
	445	124
	463	136
	547	82
	232	438
	383	418
	566	308
	328	20
	26	350
	6	28
239118_at	708	666
	426	210
	300	628
	392	452
	124	472
	182	600
	266	368
231873_at	300	118
	164	474
	191	38
	660	388
	537	644
	156	316
	469	460
	725	426
	97	130
	657	200
	462	208

For U133 X3P array
[RefSeq ID: NM_001204.6 (Number of probes = 44)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.126351.0.A1_3p_at	886	1067
	374	1089
	85	1103
	556	977
	1106	17
	115	197
	823	1011
	48	969
	484	1131
	491	1121
	364	1067
probe:U133_X3P:Hs.102761.0.S1_3p_at	6	637
	983	1043
	853	241
	1113	525
	751	381
	753	263
	1033	155
	1064	327
	548	135
	194	1125
	412	289
probe:U133_X3P:Hs.6921.0.S1_3p_at	201	7
	578	205
	624	75
	559	47
	698	673
	787	23
	644	367
	411	799
	588	551
	959	309
	234	1001
probe:U133_X3P:Hs.28959.0.A1_3p_at	113	329
	761	59
	780	679
	196	381
	723	147
	961	859
	819	413
	110	733
	291	247
	506	913
	885	259
probe:U133_X3P:Hs.315284.0.S1_3p_at	657	199
	878	1033
	1060	1079
	378	19
	1105	1081
	460	939
	373	475
	601	1115
	1140	973
	620	1119
	898	1021
probe:U133_X3P:g704361_3p_a_at	303	265
	623	485
	555	1001
	907	549
	842	595
	458	103
	595	349
	432	661
	1076	365
	1146	569
	1043	765
probe:U133_X3P:Hs2.129700.2.S1_3p_at	1145	863
	1156	1105
	107	597
	278	359
	128	711
	612	857
	1079	709
	453	189
	759	711
	974	887
	731	825