TransSpProbes

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Process data

Gene

Protein

Transcript

Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_021021.3 (Number of probes = 29)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226438_at	729	667
	537	375
	375	979
	522	1071
	1094	815
	688	183
	167	787
	189	421
	870	925
	121	307
	594	217
208608_s_at	253	645
	554	949
	981	951
	613	651
	816	833
	961	693
	895	969
	906	849
	714	755
	23	255
	635	341
214708_at	602	543
	609	1089
	245	453
	894	481
	837	1031
	1153	695
	711	335

For Human genome U133 A 2 array
[RefSeq ID: NM_021021.3 (Number of probes = 18)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208608_s_at	422	567
	417	581
	171	417
	308	189
	552	453
	236	497
	36	503
	519	567
	355	387
	333	389
	312	141
214708_at	457	267
	681	189
	598	651
	370	287
	437	417
	20	329
	640	619

For Human genome U133 A array
[RefSeq ID: NM_021021.3 (Number of probes = 18)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208608_s_at	616	143
	636	521
	522	429
	80	403
	708	399
	415	513
	533	585
	589	585
	2	467
	300	599
	500	197
214708_at	241	191
	499	335
	627	275
	457	639
	409	297
	693	671
	117	429

For Human genome U133 B array
[RefSeq ID: NM_021021.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226438_at	599	205
	442	481
	398	107
	627	599
	229	503
	388	119
	531	253
	241	407
	31	225
	380	649
	215	569

For Human genome U95 Av2 array
[RefSeq ID: NM_021021.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
37074_at	14	149
	62	53
	11	183
	281	101
	116	123
	122	407
	144	153
	36	21
	128	97
	159	55
	181	479
	12	81
	108	147
	198	143
	45	155
	368	55

For Human genome U95 B array
[RefSeq ID: NM_021021.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
47319_at	507	287
	115	613
	244	111
	195	297
	304	213
	488	223
	327	137
	551	9
	60	359
	506	535
	303	137
	13	367
	56	367
	61	359
	467	533
	500	89
44415_at	370	477
	390	467
	593	221
	421	337
	290	457
	250	475
	435	621
	179	555
	594	321
	506	527
	149	587
	400	559
	412	519
	371	477
	220	573
	251	475

For Human genome U95 C array
[RefSeq ID: NM_021021.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
64670_at	101	285
	490	47
	132	129
	294	179
	153	61
	321	235
	88	157
	64	329
	314	313
	120	123
	343	145
	119	543
	346	507
	492	441
	72	441
	188	161

For Human genome U95 D array
[RefSeq ID: NM_021021.3 (Number of probes = 6)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
82619_r_at	224	545
	489	365
	211	495
	563	359
	225	605
	428	205

For Human genome U95 E array
[RefSeq ID: NM_021021.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
81358_at	67	391
	74	75
	465	107
	581	607
	275	125
	33	617
	72	185
	263	101
	45	119
	101	61
	307	79
	75	403
	255	203
	3	89
	463	601
	158	57
69914_at	503	49
	44	435
	136	211
	222	215
	327	211
	278	85
	455	417
	365	615
	156	169
	144	183
	385	191
	377	59
	394	47
	119	555
	11	313
	585	187

For Human genome focus array
[RefSeq ID: NM_021021.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208608_s_at	218	375
	82	273
	24	95
	340	253
	81	289
	409	127
	36	371
	185	369
	251	325
	354	331
	350	255

For HT Human genome U133 plus PM array
[RefSeq ID: NM_021021.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208608_PM_s_at	718	154
	593	543
	39	54
	696	475
	463	636
	273	541
	157	211
	512	649
	368	655
	637	683
	605	461

For HT human genome U133A array
[RefSeq ID: NM_021021.3 (Number of probes = 18)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
208608_s_at	72	633
	582	169
	433	545
	319	459
	475	621
	307	429
	376	337
	494	433
	347	213
	365	543
	356	619
214708_at	128	365
	484	709
	154	461
	315	325
	477	299
	722	669
	422	213

For HT human genome U133B array
[RefSeq ID: NM_021021.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226438_at	662	224
	630	604
	249	192
	20	508
	463	568
	668	232
	256	650
	205	114
	536	488
	144	108
	539	412

For U133 X3P array
[RefSeq ID: NM_021021.3 (Number of probes = 45)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.95011.2.S1_3p_x_at	142	631
probe:U133_X3P:Hs.44241.0.S1_3p_x_at	536	1057
	128	475
	187	1153
	481	963
	439	693
	547	929
	652	759
	995	259
	317	671
	660	391
	1161	57
probe:U133_X3P:Hs.44241.0.S1_3p_s_at	819	797
	88	1029
	447	1161
	341	681
	966	1077
	487	1017
	172	349
	41	509
	461	703
	1002	185
	130	217
probe:U133_X3P:Hs.44241.0.S1_3p_at	127	475
	482	963
	548	929
	188	1153
	651	759
	316	671
	537	1057
	235	917
	1160	57
	438	693
	659	391
probe:U133_X3P:g11321639_3p_a_at	677	1073
	498	625
	731	501
	771	233
	398	495
	804	649
	718	531
	317	933
	1025	169
	11	963
	111	835