TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_006750.3 (Number of probes = 66)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
227312_at	527	683
	456	225
	391	521
	981	1113
	678	1049
	46	1131
	1061	1017
	708	375
	695	949
	711	539
	569	405
226685_at	431	559
	541	213
	394	217
	764	185
	1111	359
	692	131
	1124	879
	1124	1075
	112	1083
	500	595
	1058	107
213814_s_at	184	977
	289	731
	175	837
	205	451
	707	763
	524	941
	551	711
	1086	685
	324	83
	261	1137
	336	211
205315_s_at	747	775
	821	563
	345	601
	593	313
	170	179
	138	387
	102	181
	1161	195
	488	883
	219	465
	457	635
205314_x_at	983	847
	247	413
	819	1157
	749	321
	772	841
	770	109
	654	527
	533	145
	195	471
	1151	969
	389	477
238925_at	122	57
	1109	923
	731	1153
	156	875
	577	309
	191	811
	4	863
	1030	129
	768	415
	315	289
	594	57

For Human genome U133 A 2 array
[RefSeq ID: NM_006750.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213814_s_at	696	43
	392	265
	219	457
	514	437
	698	499
	584	675
	95	563
	234	427
	86	119
	324	583
	566	411
205315_s_at	379	99
	567	359
	605	527
	708	275
	726	337
	224	463
	454	101
	184	173
	115	383
	720	107
	509	219
205314_x_at	711	501
	214	579
	316	313
	702	237
	581	79
	351	179
	444	687
	419	61
	67	289
	169	281
	111	507

For Human genome U133 A array
[RefSeq ID: NM_006750.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213814_s_at	406	425
	380	469
	233	451
	52	275
	175	119
	442	439
	406	515
	444	581
	295	603
	342	695
	160	47
205315_s_at	349	227
	471	103
	55	179
	152	395
	517	543
	185	283
	701	369
	306	113
	648	475
	317	103
	117	351
205314_x_at	59	291
	681	705
	5	523
	395	185
	28	83
	3	247
	515	517
	463	61
	612	287
	571	325
	523	597

For Human genome U133 B array
[RefSeq ID: NM_006750.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
227312_at	639	691
	647	315
	678	415
	424	669
	228	643
	665	223
	597	621
	304	243
	586	581
	697	325
	75	133
226685_at	540	115
	281	109
	352	663
	608	361
	186	543
	627	659
	679	77
	305	215
	124	127
	82	67
	417	339
238925_at	23	171
	239	531
	558	567
	504	705
	139	183
	579	537
	379	497
	485	77
	78	37
	282	37
	107	239

For Human genome U95 Av2 array
[RefSeq ID: NM_006750.3 (Number of probes = 19)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
40809_at	321	31
	545	203
	547	567
40589_at	71	601
	321	623
	20	529
	189	435
	186	377
	544	183
	163	577
	251	275
	594	307
	503	119
	211	395
	47	547
	569	7
	162	341
	545	183
	101	519

For Human genome U95 B array
[RefSeq ID: NM_006750.3 (Number of probes = 28)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
44641_at	377	207
	424	607
	315	235
	461	139
	89	567
	392	545
	556	227
	173	429
	423	607
	86	471
	282	221
	509	69
46393_at	27	513
	105	109
	37	179
	109	235
	157	53
	12	181
	546	487
	66	75
	98	317
	61	321
	487	435
	232	131
	185	285
	631	109
	111	237
	15	409

For Human genome U95 C array
[RefSeq ID: NM_006750.3 (Number of probes = 10)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
62481_at	48	473
	52	435
	144	423
	162	205
	397	143
	323	273
	316	145
	212	275
	197	209
	292	235

For Human genome U95 D array
[RefSeq ID: NM_006750.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
76686_at	349	97
	125	305
	50	343
	417	43
	454	621
	2	477
	239	321
	6	437
	309	227
	386	301
	43	325
	306	251
	3	477
	84	317
	243	257
	42	325

For Human genome U95 E array
[RefSeq ID: NM_006750.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_006750.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
205315_s_at	355	67
	66	251
	120	75
	6	223
	118	179
	413	341
	390	67
	310	233
	267	295
	393	113
	314	139

For HT Human genome U133 plus PM array
[RefSeq ID: NM_006750.3 (Number of probes = 18)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
205315_PM_s_at	659	560
	595	117
	91	168
	65	122
	203	732
	157	50
	688	172
	391	40
	626	416
205314_PM_x_at	630	102
	185	490
	257	26
	724	57
	360	565
	558	3
	362	274
	59	81
	108	373

For HT human genome U133A array
[RefSeq ID: NM_006750.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213814_s_at	73	145
	162	729
	386	495
	604	293
	614	465
	708	631
	593	483
	422	547
	343	71
	249	451
	533	613
205314_x_at	400	325
	261	207
	506	349
	181	309
	87	553
	432	83
	441	261
	80	107
	416	693
	541	629
	668	547
205315_s_at	31	303
	287	131
	1	509
	477	249
	105	399
	658	395
	101	381
	399	573
	736	123
	702	127
	268	203

For HT human genome U133B array
[RefSeq ID: NM_006750.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
227312_at	592	326
	726	586
	568	700
	214	648
	315	316
	703	130
	163	224
	648	626
	725	418
	332	686
	686	242
226685_at	247	664
	360	546
	210	0
	276	216
	113	128
	25	110
	103	68
	398	340
	108	668
	398	78
	34	364
238925_at	458	78
	528	248
	153	36
	608	172
	381	22
	601	184
	731	568
	422	502
	716	540
	646	714
	730	534

For U133 X3P array
[RefSeq ID: NM_006750.3 (Number of probes = 55)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:g5803176_3p_a_at	269	1099
	489	769
	651	233
	933	165
	776	1043
	1083	659
	979	1009
	276	661
	1088	549
	867	833
	610	35
probe:U133_X3P:Hs.172278.3.A1_3p_a_at	1033	1041
	979	193
	748	431
	681	913
	548	725
	740	757
	1082	669
	941	393
	869	1103
	1073	1109
	51	827
probe:U133_X3P:Hs.59489.0.A1_3p_at	818	599
	764	587
	412	1041
	750	475
	1143	1125
	1078	1093
	1011	1033
	325	437
	1105	69
	221	551
	270	543
probe:U133_X3P:Hs.29667.0.A1_3p_at	233	1161
	1081	235
	113	903
	901	267
	963	665
	227	981
	145	1063
	871	1147
	253	1051
	240	243
	1148	497
probe:U133_X3P:Hs.42219.0.A1_3p_at	27	669
	329	309
	554	571
	424	555
	937	663
	740	845
	830	545
	616	345
	998	177
	835	365
	1031	201