TransSpProbes

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Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_178313.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215918_s_at	411	975
	343	1107
	656	473
	208	343
	740	1063
	529	21
	285	505
	903	289
	120	769
	490	673
	919	1031
214856_at	351	497
	1136	723
	1076	17
	1092	625
	175	1069
	1152	1071
	419	761
	732	795
	1130	171
	730	267
	809	809
226342_at	264	969
	955	1015
	708	131
	641	1125
	13	353
	1116	817
	341	105
	810	811
	467	9
	866	841
	304	285

For Human genome U133 A 2 array
[RefSeq ID: NM_178313.2 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215918_s_at	342	281
	359	659
	4	305
	708	407
	642	9
	567	193
	127	585
	475	621
	566	457
	394	159
	653	637
214856_at	24	375
	408	97
	151	297
	584	453
	559	433
	237	483
	60	641
	152	149
	97	13
	322	475
	597	637

For Human genome U133 A array
[RefSeq ID: NM_178313.2 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215918_s_at	639	415
	192	641
	542	303
	607	473
	460	291
	463	585
	550	9
	520	679
	504	199
	443	163
	406	657
214856_at	546	305
	317	489
	501	659
	700	373
	555	467
	208	447
	558	497
	181	99
	228	659
	30	13
	167	151

For Human genome U133 B array
[RefSeq ID: NM_178313.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226342_at	179	77
	691	63
	171	167
	86	593
	257	689
	463	517
	606	501
	358	9
	162	499
	508	619
	563	209

For Human genome U95 Av2 array
[RefSeq ID: NM_178313.2 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
39452_s_at	378	629
	606	265
	465	275
	367	437
	611	547
	486	511
	519	529
	422	399
	429	305
	630	299
	592	527
	567	317
	324	441
	417	475
	547	481
	636	129
40551_at	615	1
	476	487
	321	259
	490	581
	551	545
	54	523
	367	291
	629	151
	242	557
	139	497
	449	93
	456	297
	524	617
	492	637
	581	495
	549	129

For Human genome U95 B array
[RefSeq ID: NM_178313.2 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
52616_at	217	325
	323	195
	72	433
	559	17
	42	461
	183	467
	108	383
	291	427
	478	295
	142	343
	56	545
	110	623
	124	575
45202_at	260	371
	408	339
	79	545
	444	241
	68	485
	587	55
	348	179
	463	395
	241	343
	607	89
	330	213
	429	117
	106	511
	490	173

For Human genome U95 C array
[RefSeq ID: NM_178313.2 (Number of probes = 13)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
58823_s_at	199	9
	286	1
	252	265
	525	337
	47	23
	33	67
	116	157
	408	453
	158	341
	148	397
	11	99
	377	15
	12	99

For Human genome U95 D array
[RefSeq ID: NM_178313.2 (Number of probes = 15)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
67960_at	464	89
	169	581
	528	459
	279	445
	511	325
	67	499
	402	529
	564	321
	554	517
	1	541
	308	423
	538	441
	385	155
	293	391
	145	503

For Human genome U95 E array
[RefSeq ID: NM_178313.2 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
81959_at	56	491
	72	117
	25	169
	50	71
	74	21
	178	85
	137	179
	24	169
	26	253
	68	61
	360	3
	127	21
	491	541
	463	7
	562	315
	252	285

For Human genome focus array
[RefSeq ID: NM_178313.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215918_s_at	247	427
	367	13
	173	413
	306	183
	113	401
	421	105
	302	299
	431	119
	85	375
	386	253
	98	187

For HT Human genome U133 plus PM array
[RefSeq ID: NM_178313.2 (Number of probes = 0)]

No transcript specific probes found

For HT human genome U133A array
[RefSeq ID: NM_178313.2 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
215918_s_at	460	245
	428	713
	550	185
	482	503
	227	625
	501	659
	653	691
	293	29
	630	315
	594	443
	681	221
214856_at	259	335
	178	85
	620	691
	390	103
	453	515
	428	403
	397	477
	572	521
	634	499
	148	29
	89	423

For HT human genome U133B array
[RefSeq ID: NM_178313.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226342_at	721	6
	308	78
	676	168
	706	64
	291	696
	60	600
	643	522
	730	506
	521	628
	319	504
	547	210

For U133 X3P array
[RefSeq ID: NM_178313.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.107164.3.A1_3p_at	892	387
	73	71
	1015	1155
	374	1117
	670	21
	622	775
	1114	87
	1055	527
	473	537
	877	195
	138	319
probe:U133_X3P:Hs.107164.4.S1_3p_at	1025	107
	506	377
	563	519
	876	33
	105	907
	834	573
	106	1019
	334	827
	61	1109
	1002	1113
	862	929
probe:U133_X3P:Hs.236443.0.S1_3p_at	224	677
	957	121
	597	99
	1005	725
	535	379
	730	829
	1135	977
	677	149
	1104	9
	815	687
	736	33