TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_005990.3 (Number of probes = 35)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228394_at	146	579
	388	819
	675	721
	612	1111
	642	181
	518	729
	453	1091
	1109	51
203047_at	1085	319
	492	391
	845	817
	68	441
	683	917
	720	433
	1089	787
	527	211
	600	193
	357	493
	53	335
40420_at	184	453
	134	463
	268	539
	965	897
	877	999
	702	231
	842	969
	103	1021
	799	461
	531	885
	438	703
	1106	693
	711	733
	513	459
	437	339
	543	873

For Human genome U133 A 2 array
[RefSeq ID: NM_005990.3 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
203047_at	712	469
	264	549
	325	109
	653	187
	418	253
	49	179
	532	117
	497	293
	710	261
	274	489
	618	223
40420_at	45	275
	274	325
	528	439
	82	613
	54	415
	444	529
	553	191
	522	267
	86	129
	131	275
	334	271
	700	421
	34	601
	451	521
	25	537
	173	579

For Human genome U133 A array
[RefSeq ID: NM_005990.3 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
203047_at	630	261
	86	485
	247	121
	157	111
	513	183
	243	503
	352	565
	347	193
	242	231
	361	305
	103	271
40420_at	304	453
	630	281
	279	553
	468	545
	145	281
	295	283
	536	335
	661	629
	503	427
	79	131
	529	435
	170	617
	159	539
	131	599
	321	271
	212	197

For Human genome U133 B array
[RefSeq ID: NM_005990.3 (Number of probes = 8)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228394_at	698	31
	86	679
	413	447
	514	351
	618	441
	361	503
	459	105
	519	669

For Human genome U95 Av2 array
[RefSeq ID: NM_005990.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
40420_at	554	67
	223	585
	168	307
	144	457
	329	371
	367	221
	319	217
	45	627
	91	395
	265	325
	437	59
	38	379
	65	401
	135	329
	469	573
	412	25

For Human genome U95 B array
[RefSeq ID: NM_005990.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 C array
[RefSeq ID: NM_005990.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
64153_at	66	23
	396	21
	222	189
	128	59
	7	515
	231	393
	106	19
	446	137
	21	627
	136	389
	272	91
	8	317
	432	539
	457	315
	143	231
	97	185

For Human genome U95 D array
[RefSeq ID: NM_005990.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
91030_at	168	193
	251	589
	127	357
	166	231
	187	129
	337	63
	391	161
	307	51
	328	161
	461	527
	167	231
	199	489
	152	249
	139	551
	285	601
	164	97

For Human genome U95 E array
[RefSeq ID: NM_005990.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_005990.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
40420_at	240	271
	304	177
	392	125
	403	181
	438	85
	244	345
	73	275
	410	173
	158	379
	109	391
	320	349
	125	341
	107	215
	93	287
	83	399
	386	179

For HT Human genome U133 plus PM array
[RefSeq ID: NM_005990.3 (Number of probes = 9)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
203047_PM_at	371	659
	243	480
	431	667
	530	733
	536	326
	717	567
	83	185
	527	562
	700	471

For HT human genome U133A array
[RefSeq ID: NM_005990.3 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
203047_at	557	285
	301	537
	343	319
	676	213
	416	513
	498	601
	98	133
	132	205
	211	143
	707	253
	157	297
40420_at	724	575
	150	463
	322	307
	322	589
	411	621
	476	223
	444	359
	419	483
	213	453
	538	307
	64	309
	97	569
	187	631
	380	299
	734	155
	89	645

For HT human genome U133B array
[RefSeq ID: NM_005990.3 (Number of probes = 8)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
228394_at	729	680
	704	30
	404	450
	249	444
	642	106
	35	510
	225	674
	682	350

For U133 X3P array
[RefSeq ID: NM_005990.3 (Number of probes = 8)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.24222.0.A1_3p_at	482	725
	1106	361
	841	761
	812	771
	233	1079
	410	117
	634	193
	996	59