TransSpProbes

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Process data

Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_007114.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
227685_at	541	1111
	678	291
	64	729
	563	663
	616	91
	899	271
	1020	731
	810	733
	1111	249
	971	1061
	670	1047
235566_at	918	845
	1051	243
	128	683
	926	365
	336	1045
	1098	837
	138	433
	805	777
	1143	1065
	1055	701
	1004	423
213024_at	972	731
	894	581
	603	1113
	873	739
	1015	751
	756	689
	786	1159
	378	1031
	145	243
	391	157
	665	649

For Human genome U133 A 2 array
[RefSeq ID: NM_007114.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213024_at	455	347
	324	87
	241	437
	695	413
	251	663
	299	449
	135	135
	29	679
	679	617
	131	389
	699	441

For Human genome U133 A array
[RefSeq ID: NM_007114.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213024_at	172	139
	205	457
	239	639
	211	89
	190	361
	213	403
	636	679
	509	427
	590	451
	303	705
	657	459

For Human genome U133 B array
[RefSeq ID: NM_007114.2 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
227685_at	232	681
	375	57
	155	449
	311	447
	527	171
	451	159
	297	403
	454	639
	116	647
	285	147
	265	449
235566_at	191	259
	526	427
	533	515
	58	219
	383	477
	63	145
	689	415
	132	641
	639	519
	464	651
	132	255

For Human genome U95 Av2 array
[RefSeq ID: NM_007114.2 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
36901_at	59	367
	146	343
	11	35
	209	487
	70	483
	242	609
	209	17
	19	243
	171	253
	99	247
	27	33
	148	69
	134	163
	254	95
	470	163
	83	59

For Human genome U95 B array
[RefSeq ID: NM_007114.2 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 C array
[RefSeq ID: NM_007114.2 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
59302_at	126	183
	263	89
	69	555
	68	555
	383	299
	269	89
	303	59
	399	135
	501	21
	161	237
	470	45
	100	205
	141	413
	198	77
	125	487
	318	293
63052_at	114	385
	517	605
	98	115
	257	261
	307	169
	23	123
	48	349
	419	265
	203	101
	396	57
	382	295
	113	483
	514	273
	237	93
	67	275
	25	61

For Human genome U95 D array
[RefSeq ID: NM_007114.2 (Number of probes = 5)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
80818_at	102	561
	259	411
	106	549
	494	377
	51	545

For Human genome U95 E array
[RefSeq ID: NM_007114.2 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
80488_r_at	520	319
	138	607
	400	313
	333	497
	528	49
	504	425
	348	267
	603	289
	82	549
	238	393
	336	247
	227	537
	622	561
	469	141
	623	337
	387	255

For Human genome focus array
[RefSeq ID: NM_007114.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213024_at	185	403
	432	269
	316	253
	201	63
	277	229
	412	285
	292	89
	286	429
	322	367
	262	287
	177	283

For HT Human genome U133 plus PM array
[RefSeq ID: NM_007114.2 (Number of probes = 9)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213024_PM_at	406	574
	62	239
	312	207
	56	649
	699	235
	285	263
	347	490
	232	399
	218	96

For HT human genome U133A array
[RefSeq ID: NM_007114.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213024_at	81	3
	338	433
	591	455
	464	387
	377	727
	594	691
	561	671
	659	1
	504	163
	560	485
	178	485

For HT human genome U133B array
[RefSeq ID: NM_007114.2 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
227685_at	596	168
	85	450
	101	410
	376	646
	6	654
	230	146
	473	58
	222	452
	365	160
	420	684
	323	452
235566_at	108	520
	267	520
	736	644
	285	658
	466	482
	44	420
	0	252
	164	220
	44	260
	590	432
	56	144

For U133 X3P array
[RefSeq ID: NM_007114.2 (Number of probes = 44)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.9856.0.A1_3p_at	1030	825
	755	381
	509	7
	756	149
	1059	105
	109	1113
	65	659
	1005	233
	570	723
	1020	327
	726	851
probe:U133_X3P:Hs.324611.0.A1_3p_x_at	512	827
	1072	1117
	152	907
	1075	1073
	218	1135
	205	771
	828	707
	243	715
	196	1081
	1056	123
	701	1005
probe:U133_X3P:Hs.324611.0.A1_3p_at	1071	1117
	829	707
	483	1123
	244	715
	380	711
	204	771
	908	981
	83	673
	384	743
	688	885
	1055	123
probe:U133_X3P:Hs.267632.0.S2_3p_at	360	113
	59	131
	16	71
	1118	725
	584	1115
	276	481
	160	333
	1061	1103
	98	227
	989	273
	506	1157