TransSpProbes

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Process data

Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_024989.3 (Number of probes = 45)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
241801_at	367	551
	284	1073
	197	595
	1038	1123
	860	87
	69	623
	284	259
	511	221
	504	231
	1079	845
	413	717
213469_at	812	709
	1124	315
	26	771
	862	927
	410	213
	44	579
	411	589
	216	555
	307	333
	21	735
	485	537
239725_at	398	821
	819	205
	780	1125
	362	363
	434	1055
	183	927
	743	97
	1015	777
	349	1045
	720	55
	458	1117
244321_at	677	163
	379	859
	26	1081
	865	293
	590	83
	7	1091
	882	901
	411	1039
	44	107
	272	211
	1151	787
220576_at	31	605

For Human genome U133 A 2 array
[RefSeq ID: NM_024989.3 (Number of probes = 12)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213469_at	463	555
	366	119
	323	425
	206	175
	435	187
	518	333
	96	325
	541	439
	716	459
	136	349
	401	347
220576_at	126	363

For Human genome U133 A array
[RefSeq ID: NM_024989.3 (Number of probes = 12)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213469_at	60	359
	154	345
	106	121
	186	437
	184	475
	30	181
	276	451
	431	333
	227	193
	139	365
	420	573
220576_at	174	375

For Human genome U133 B array
[RefSeq ID: NM_024989.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
241801_at	281	335
	173	127
	25	131
	374	521
	444	361
	638	687
	261	659
	159	437
	140	377
	695	151
	581	55
239725_at	92	689
	471	59
	187	569
	538	35
	301	123
	251	477
	608	503
	603	215
	159	645
	54	641
	236	687
244321_at	613	475
	647	661
	393	173
	468	51
	340	95
	294	637
	454	123
	71	555
	330	667
	465	63
	266	529

For Human genome U95 Av2 array
[RefSeq ID: NM_024989.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
39324_at	375	71
	22	7
	368	9
	120	37
	285	503
	95	69
	187	55
	182	181
	152	225
	297	27
	94	127
	314	81
	416	323
	72	19
	356	27
	252	175

For Human genome U95 B array
[RefSeq ID: NM_024989.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 C array
[RefSeq ID: NM_024989.3 (Number of probes = 13)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
65319_r_at	136	407
	551	453
	438	509
	7	511
	137	449
	381	541
	633	527
	280	361
	504	129
	354	209
	257	251
	508	633
	445	163

For Human genome U95 D array
[RefSeq ID: NM_024989.3 (Number of probes = 14)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
84285_at	41	39
	75	545
	80	227
	76	79
	13	111
	297	9
	294	255
	144	159
	193	211
	165	333
	73	481
	4	259
	298	9
	254	189

For Human genome U95 E array
[RefSeq ID: NM_024989.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_024989.3 (Number of probes = 0)]

No transcript specific probes found

For HT Human genome U133 plus PM array
[RefSeq ID: NM_024989.3 (Number of probes = 9)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213469_PM_at	81	336
	446	719
	522	136
	642	485
	41	304
	604	213
	448	227
	19	439
	411	328

For HT human genome U133A array
[RefSeq ID: NM_024989.3 (Number of probes = 12)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
213469_at	535	357
	71	391
	645	479
	679	205
	16	387
	602	369
	508	473
	210	469
	55	605
	600	141
	411	199
220576_at	132	401

For HT human genome U133B array
[RefSeq ID: NM_024989.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
241801_at	34	58
	407	130
	127	136
	208	664
	371	152
	209	696
	432	384
	609	362
	606	334
	629	440
	172	526
239725_at	437	34
	660	120
	421	510
	733	696
	376	572
	455	216
	306	646
	373	474
	525	692
	278	60
	554	650
244321_at	520	558
	301	490
	193	174
	12	534
	184	124
	56	666
	245	62
	607	96
	140	52
	164	642
	400	672

For U133 X3P array
[RefSeq ID: NM_024989.3 (Number of probes = 44)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.16727.0.A1_3p_at	438	919
	590	1031
	43	1041
	139	397
	465	63
	739	237
	257	113
	671	479
	651	809
	525	1101
	620	1093
probe:U133_X3P:Hs.162257.0.S1_3p_at	279	779
	481	197
	722	1099
	812	1059
	435	579
	699	711
	916	561
	474	625
	899	189
	255	769
	957	585
probe:U133_X3P:Hs.25159.0.S1_3p_at	1116	719
	124	595
	486	549
	178	995
	560	35
	583	1153
	1113	933
	88	469
	132	607
	260	405
	676	513
probe:U133_X3P:Hs.300970.0.A1_3p_at	327	271
	33	1023
	226	997
	861	691
	46	77
	673	861
	481	897
	428	199
	687	55
	711	1111
	935	35