TransSpProbes

Home

FAQs

Post question

Process data

Gene

Protein

Transcript

Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_006769.3 (Number of probes = 53)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
229537_at	629	777
	1014	341
	310	695
	261	271
	1065	611
	445	373
	478	891
	700	255
	344	525
	775	729
209204_at	810	957
	170	493
	137	561
	938	573
	464	419
	804	253
	728	385
	1072	465
	699	663
	119	95
241922_at	1145	461
	251	459
	456	451
	795	273
	533	281
	48	281
	315	133
	223	439
	1002	315
	253	183
	223	989
209205_s_at	718	425
	96	715
	273	1129
	437	153
	544	1037
	765	749
	740	319
	972	667
	189	331
	465	1125
	367	453
227155_at	160	789
	288	731
	384	709
	28	657
	679	397
	944	693
	801	1085
	826	521
	98	753
	225	281
	1020	1151

For Human genome U133 A 2 array
[RefSeq ID: NM_006769.3 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209204_at	354	243
	664	217
	221	141
	434	291
	331	397
	611	345
	657	573
	470	337
	491	53
	36	277
209205_s_at	597	267
	602	427
	217	183
	713	443
	289	661
	79	179
	301	673
	432	401
	532	81
	498	621
	549	247

For Human genome U133 A array
[RefSeq ID: NM_006769.3 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209204_at	141	145
	76	227
	9	355
	580	285
	26	251
	114	411
	595	589
	75	303
	116	347
	545	53
209205_s_at	468	461
	238	695
	8	415
	115	255
	225	89
	601	191
	562	441
	561	639
	672	275
	642	183
	483	687

For Human genome U133 B array
[RefSeq ID: NM_006769.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
229537_at	193	203
	368	223
	703	157
	595	369
	18	549
	236	447
	524	477
	512	423
	576	317
	214	149
241922_at	14	279
	480	159
	382	107
	422	187
	698	271
	90	79
	461	605
	589	263
	286	165
	206	165
	208	277
227155_at	480	163
	260	399
	466	411
	554	483
	490	447
	543	237
	96	315
	466	707
	315	665
	385	463
	586	423

For Human genome U95 Av2 array
[RefSeq ID: NM_006769.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
1452_at	574	5
	306	175
	91	339
	6	421
	6	481
	35	637
	335	157
	351	163
	620	273
	345	311
	514	53
	389	205
	66	377
	541	351
	388	599
	180	509

For Human genome U95 B array
[RefSeq ID: NM_006769.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
44002_at	505	453
	415	357
	561	247
	395	485
	451	505
	550	493
	508	293
	604	157
	515	579
	325	535
	242	541
	369	531
	574	423
	364	417
	283	539
	550	537

For Human genome U95 C array
[RefSeq ID: NM_006769.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
62235_at	459	347
	575	635
	131	583
	362	305
	270	411
	590	539
	595	199
	394	411
	603	147
	158	607
	103	613
	606	635
	620	249
	247	447
	334	385
	130	583

For Human genome U95 D array
[RefSeq ID: NM_006769.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_006769.3 (Number of probes = 48)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
86653_at	338	195
	427	59
	505	63
	390	63
	30	577
	523	57
	430	137
	171	277
	374	53
	304	175
	10	529
	630	495
	363	129
	485	551
	538	93
	387	67
78763_at	560	261
	538	281
	368	437
	551	495
	276	551
	521	373
	243	583
	529	609
	275	587
	623	247
	486	625
	304	547
	604	509
	559	261
	459	413
	555	481
87578_at	344	513
	255	637
	348	495
	313	477
	464	409
	214	579
	346	537
	575	469
	470	581
	478	443
	583	433
	637	83
	508	593
	403	425
	291	613
	345	571

For Human genome focus array
[RefSeq ID: NM_006769.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209205_s_at	109	119
	131	263
	150	437
	28	119
	82	291
	65	281
	389	427
	354	175
	414	403
	247	163
	364	57

For HT Human genome U133 plus PM array
[RefSeq ID: NM_006769.3 (Number of probes = 20)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209204_PM_at	5	680
	81	349
	144	467
	28	692
	306	175
	404	730
	443	552
	87	286
	459	494
209205_PM_s_at	730	319
	601	2
	265	541
	294	244
	435	179
	739	232
	293	209
	63	326
	523	508
	154	225
	656	528

For HT human genome U133A array
[RefSeq ID: NM_006769.3 (Number of probes = 21)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
209204_at	241	221
	233	379
	270	311
	528	251
	177	169
	202	385
	504	75
	122	615
	174	277
	707	435
209205_s_at	614	491
	31	187
	605	735
	342	471
	135	417
	340	303
	29	445
	30	209
	233	675
	690	111
	652	281

For HT human genome U133B array
[RefSeq ID: NM_006769.3 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
229537_at	504	552
	692	450
	419	376
	269	158
	724	480
	223	224
	214	314
	340	204
	612	148
	626	426
241922_at	479	166
	549	610
	508	278
	687	280
	194	168
	139	184
	275	264
	682	274
	465	162
	208	108
	172	80
227155_at	270	668
	601	236
	662	464
	510	166
	172	0
	225	428
	1	406
	277	490
	637	316
	723	450
	391	714

For U133 X3P array
[RefSeq ID: NM_006769.3 (Number of probes = 75)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.3844.0.A1_3p_x_at	122	515
	1140	459
	430	983
	941	449
	269	261
	259	163
	519	865
	473	917
	317	1023
	594	895
	820	809
probe:U133_X3P:Hs.155639.0.A1_3p_at	717	941
	677	663
	977	545
	528	581
	338	1023
	275	349
	694	569
	899	913
	360	207
	1034	95
	555	669
probe:U133_X3P:Hs.3844.0.A1_3p_at	1141	459
	121	515
	113	691
	595	895
	474	917
	496	461
	599	1157
	1097	101
	429	983
	260	163
	520	865
probe:U133_X3P:Hs.27260.0.A1_3p_at	546	71
	936	117
	1120	1039
	838	153
	566	649
	29	197
	303	449
	512	689
	198	289
	280	553
probe:U133_X3P:209204_3p_at	574	449
	140	287
	285	581
	807	939
	334	507
	468	485
	37	419
	62	109
	838	569
	108	661
probe:U133_X3P:g13097818_3p_a_at	82	341
	1030	11
	766	663
	369	341
	956	51
	986	903
	428	1103
	129	919
	711	831
	117	1021
	652	297
probe:U133_X3P:Hs.3844.1.A1_3p_at	161	427
	124	1151
	219	635
	1124	313
	225	199
	1067	99
	103	723
	312	321
	827	129
	453	771
	370	967