TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_003901.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212322_at	1024	925
	380	853
	71	905
	374	1043
	972	901
	808	117
	723	551
	448	983
	335	991
	1116	459
	1140	1027
208381_s_at	162	173
	342	141
	308	839
	653	981
	610	1151
	5	369
	13	607
	347	877
	606	187
	726	833
	293	231
212321_at	239	843
	505	389
	154	821
	875	747
	988	1073
	760	1107
	281	649
	646	265
	584	147
	818	305
	1056	57

For Human genome U133 A 2 array
[RefSeq ID: NM_003901.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212322_at	423	541
	14	273
	387	617
	80	65
	324	539
	693	625
	616	591
	467	331
	432	507
	172	589
	698	553
208381_s_at	176	209
	64	365
	708	497
	345	523
	108	99
	332	125
	132	685
	709	587
	366	499
	321	1
	654	99
212321_at	112	387
	59	649
	651	145
	630	629
	703	501
	363	169
	354	81
	609	221
	323	33
	409	445
	118	491

For Human genome U133 A array
[RefSeq ID: NM_003901.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212322_at	408	559
	122	523
	464	645
	684	65
	564	605
	296	613
	380	635
	160	557
	67	281
	286	343
	570	571
208381_s_at	673	515
	654	539
	530	99
	170	215
	453	129
	459	109
	238	513
	505	705
	160	1
	66	605
	576	369
212321_at	184	519
	398	677
	194	167
	277	33
	645	81
	391	151
	617	505
	346	401
	500	661
	153	461
	559	229

For Human genome U133 B array
[RefSeq ID: NM_003901.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 Av2 array
[RefSeq ID: NM_003901.3 (Number of probes = 29)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
35875_at	381	343
	298	301
	500	81
	572	535
	219	363
	102	439
	273	421
	20	547
	207	387
	394	377
	47	521
	289	327
	430	207
	514	65
35876_s_at	308	491
	165	493
	142	527
	277	285
	449	603
	567	9
	123	599
	533	83
	290	547
	192	91
	445	339
	587	231
	372	209
	128	453
	60	597

For Human genome U95 B array
[RefSeq ID: NM_003901.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
44046_at	362	281
	603	219
	304	603
	591	585
	584	541
	471	417
	294	599
	555	627
	99	553
	448	357
	541	487
	328	361
	469	237
	486	591
	423	303
	483	569

For Human genome U95 C array
[RefSeq ID: NM_003901.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
63400_at	620	285
	161	483
	453	35
	334	233
	107	583
	573	255
	343	455
	29	635
	529	147
	236	579
	476	107
	118	475
	497	199
	272	261
	472	25
	198	525

For Human genome U95 D array
[RefSeq ID: NM_003901.3 (Number of probes = 0)]

No transcript specific probes found

For Human genome U95 E array
[RefSeq ID: NM_003901.3 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
87266_at	94	361
	313	463
	253	119
	151	395
	394	637
	312	135
	92	331
	194	139
	476	607
	285	197
	317	285
	308	15
	610	353
	195	139
	296	135
	265	569

For Human genome focus array
[RefSeq ID: NM_003901.3 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212321_at	338	427
	229	255
	341	319
	179	293
	427	111
	18	329
	270	25
	148	55
	249	145
	224	99
	165	371

For HT Human genome U133 plus PM array
[RefSeq ID: NM_003901.3 (Number of probes = 27)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212322_PM_at	65	205
	107	462
	591	333
	57	237
	642	370
	89	424
	105	395
	287	450
	364	447
208381_PM_s_at	742	369
	340	351
	531	672
	295	4
	36	65
	133	415
	281	115
	491	693
	563	55
212321_PM_at	302	174
	479	116
	735	655
	186	211
	109	590
	113	88
	487	349
	95	689
	506	513

For HT human genome U133A array
[RefSeq ID: NM_003901.3 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
212322_at	716	535
	170	591
	154	645
	492	17
	722	371
	432	679
	54	643
	119	605
	591	305
	645	583
	131	639
208381_s_at	619	1
	344	639
	74	401
	709	571
	253	87
	550	545
	98	239
	642	737
	238	545
	380	127
	17	121
212321_at	626	537
	326	431
	230	195
	252	491
	564	659
	558	93
	76	53
	66	543
	645	169
	191	707
	235	251

For HT human genome U133B array
[RefSeq ID: NM_003901.3 (Number of probes = 0)]

No transcript specific probes found

For U133 X3P array
[RefSeq ID: NM_003901.3 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.186613.1.S2_3p_at	928	561
	1032	719
	926	537
	1012	973
	172	1117
	154	723
	754	909
	27	817
	795	53
	328	711
	594	33
probe:U133_X3P:Hs.186613.1.S3_3p_at	223	1161
	794	1099
	371	633
	151	433
	275	23
	873	1045
	114	37
	1015	325
	1150	1131
	741	31
	471	803