TransSpProbes

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Gene

Protein

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Blast result

Transcript specific probe-cluster

For Human genome U133 plus 2 array
[RefSeq ID: NM_003940.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226902_at	1074	505
	93	811
	878	431
	418	15
	628	773
	811	699
	107	1075
	818	249
	1015	649
	36	83
	866	649
205356_at	1090	629
	537	905
	397	791
	751	511
	1074	1091
	371	281
	605	887
	694	513
	1077	913
	1039	395
	653	435
227788_at	545	905
	1000	211
	1095	411
	160	295
	296	427
	974	507
	146	757
	787	315
	72	909
	1012	805
	957	149

For Human genome U133 A 2 array
[RefSeq ID: NM_003940.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
205356_at	536	545
	626	249
	249	379
	662	153
	350	287
	22	309
	92	653
	698	227
	547	309
	546	541
	635	471

For Human genome U133 A array
[RefSeq ID: NM_003940.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
205356_at	295	317
	407	391
	694	233
	565	155
	236	563
	117	487
	185	257
	400	319
	341	557
	305	547
	314	671

For Human genome U133 B array
[RefSeq ID: NM_003940.2 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226902_at	679	259
	255	473
	86	497
	641	49
	115	305
	510	395
	604	649
	394	147
	502	395
	205	427
	70	13
227788_at	212	307
	175	247
	105	175
	562	463
	37	495
	437	555
	44	89
	46	257
	326	557
	389	123
	598	185

For Human genome U95 Av2 array
[RefSeq ID: NM_003940.2 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
40701_at	615	445
	630	511
	574	55
	551	359
	623	305
	79	525
	448	185
	606	437
	588	181
	315	607
	122	535
	571	489
	410	219
	432	185
	450	317
	558	593

For Human genome U95 B array
[RefSeq ID: NM_003940.2 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
45855_at	117	547
	309	393
	225	471
	600	637
	498	287
	62	539
	527	547
	555	225
	140	417
	587	473
	350	229
	459	147
	207	495
	126	503
	139	477
	453	549

For Human genome U95 C array
[RefSeq ID: NM_003940.2 (Number of probes = 32)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
60531_at	119	415
	177	7
	425	517
	394	255
	54	5
	312	169
	9	347
	18	127
	193	463
	280	213
	515	241
	456	243
	47	453
	343	191
	261	473
	323	431
49358_at	414	553
	414	347
	530	355
	464	535
	631	233
	626	161
	469	353
	486	501
	435	389
	185	621
	430	333
	386	547
	210	603
	595	221
	609	475
	525	487

For Human genome U95 D array
[RefSeq ID: NM_003940.2 (Number of probes = 16)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
83157_at	246	617
	406	459
	355	539
	604	465
	377	421
	200	539
	254	601
	238	565
	595	231
	329	577
	486	401
	170	581
	620	345
	181	625
	485	401
	345	509

For Human genome U95 E array
[RefSeq ID: NM_003940.2 (Number of probes = 0)]

No transcript specific probes found

For Human genome focus array
[RefSeq ID: NM_003940.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
205356_at	317	353
	72	307
	344	101
	97	203
	87	345
	96	423
	326	355
	335	203
	312	151
	53	247
	145	167

For HT Human genome U133 plus PM array
[RefSeq ID: NM_003940.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
205356_PM_at	201	421
	33	742
	368	148
	479	388
	438	540
	40	456
	532	396
	317	174
	497	123
	397	258
	351	303

For HT human genome U133A array
[RefSeq ID: NM_003940.2 (Number of probes = 11)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
205356_at	219	289
	686	597
	299	705
	91	343
	226	577
	192	409
	193	339
	689	57
	574	169
	574	567
	308	515

For HT human genome U133B array
[RefSeq ID: NM_003940.2 (Number of probes = 22)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
226902_at	680	146
	29	664
	700	400
	495	10
	646	400
	277	432
	279	502
	113	480
	416	308
	475	48
	164	260
227788_at	522	176
	417	88
	652	246
	98	500
	496	256
	29	308
	390	560
	738	452
	593	558
	352	124
	673	188

For U133 X3P array
[RefSeq ID: NM_003940.2 (Number of probes = 33)]

Probe-cluster	Co-ordinates
Probe-cluster	X	Y
probe:U133_X3P:Hs.20007.0.A1_3p_at	913	795
	248	1059
	737	113
	478	1083
	357	721
	881	1049
	250	789
	1142	231
	761	1111
	1005	765
	706	245
probe:U133_X3P:g4507848_3p_at	1090	807
	489	81
	939	649
	987	791
	421	1125
	122	885
	733	631
	119	839
	267	1069
	71	441
	204	787
probe:U133_X3P:Hs.29074.0.A1_3p_at	1017	1009
	585	369
	346	853
	324	1121
	19	903
	667	415
	608	889
	967	305
	403	1089
	327	351
	790	953