Search results for the GEO ID: GSE10629  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM267893 | GPL1352 |
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Human ileum villus epithelium P1
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Ieal tissue biopsies
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Sample was obtained from individual undergoing surgery for colon cancer, bowel obstruction, or other non-inflammatory conditions. Fixed overnight in 4% (w/v) paraformaldehyde
|
The specimens were free of macroscopic signs of disease or inflammation
|
| Sample_geo_accession | GSM267893
| | Sample_status | Public on Feb 28 2008
| | Sample_submission_date | Feb 25 2008
| | Sample_last_update_date | Feb 27 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA extraction protocol with proteinase K digestion of cellular extract
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix 2-cycle amplification and labeling protocol
| | Sample_hyb_protocol | 16 hr at 55rpm in an Affymetrix hybridization oven at 45C
| | Sample_scan_protocol | 100 format, Affymetrix scanner 3000
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL1352
| | Sample_contact_name | Michael,,George
| | Sample_contact_email | mdgeorge@ucdavis.edu
| | Sample_contact_phone | 5307547242
| | Sample_contact_laboratory | School of Medicine
| | Sample_contact_department | Microarray Core Facility
| | Sample_contact_institute | University of California, Davis
| | Sample_contact_address | One Shields Ave
| | Sample_contact_city | Davis
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 95616
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267893/suppl/GSM267893.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267893/suppl/GSM267893.CHP.gz
| | Sample_series_id | GSE10629
| | Sample_data_row_count | 61359
| | |
|
GSM267894 | GPL1352 |
|
Human ileum crypt epithelium P1
|
Ileal tissue biopsies
|
Sample was obtained from individual undergoing surgery for colon cancer, bowel obstruction, or other non-inflammatory conditions. Fixed overnight in 4% (w/v) paraformaldehyde
|
The specimens were free of macroscopic signs of disease or inflammation
|
| Sample_geo_accession | GSM267894
| | Sample_status | Public on Feb 28 2008
| | Sample_submission_date | Feb 25 2008
| | Sample_last_update_date | Feb 27 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA extraction protocol with proteinase K digestion of cellular extract
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix 2-cycle amplification and labeling protocol
| | Sample_hyb_protocol | 16 hr at 55rpm in an Affymetrix hybridization oven at 45C
| | Sample_scan_protocol | 100 format, Affymetrix scanner 3000
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL1352
| | Sample_contact_name | Michael,,George
| | Sample_contact_email | mdgeorge@ucdavis.edu
| | Sample_contact_phone | 5307547242
| | Sample_contact_laboratory | School of Medicine
| | Sample_contact_department | Microarray Core Facility
| | Sample_contact_institute | University of California, Davis
| | Sample_contact_address | One Shields Ave
| | Sample_contact_city | Davis
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 95616
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267894/suppl/GSM267894.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267894/suppl/GSM267894.CHP.gz
| | Sample_series_id | GSE10629
| | Sample_data_row_count | 61359
| | |
|
GSM267895 | GPL1352 |
|
Human ileum villus epithelium P2
|
Ileal tissue biopsies
|
Sample was obtained from individual undergoing surgery for colon cancer, bowel obstruction, or other non-inflammatory conditions. Fixed overnight in 4% (w/v) paraformaldehyde
|
The specimens were free of macroscopic signs of disease or inflammation
|
| Sample_geo_accession | GSM267895
| | Sample_status | Public on Feb 28 2008
| | Sample_submission_date | Feb 25 2008
| | Sample_last_update_date | Feb 27 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA extraction protocol with proteinase K digestion of cellular extract
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix 2-cycle amplification and labeling protocol
| | Sample_hyb_protocol | 16 hr at 55rpm in an Affymetrix hybridization oven at 45C
| | Sample_scan_protocol | 100 format, Affymetrix scanner 3000
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL1352
| | Sample_contact_name | Michael,,George
| | Sample_contact_email | mdgeorge@ucdavis.edu
| | Sample_contact_phone | 5307547242
| | Sample_contact_laboratory | School of Medicine
| | Sample_contact_department | Microarray Core Facility
| | Sample_contact_institute | University of California, Davis
| | Sample_contact_address | One Shields Ave
| | Sample_contact_city | Davis
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 95616
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267895/suppl/GSM267895.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267895/suppl/GSM267895.CHP.gz
| | Sample_series_id | GSE10629
| | Sample_data_row_count | 61359
| | |
|
GSM267896 | GPL1352 |
|
Human ileum crypt epithelium P2
|
Ileal tissue biopsies
|
Sample was obtained from individual undergoing surgery for colon cancer, bowel obstruction, or other non-inflammatory conditions. Fixed overnight in 4% (w/v) paraformaldehyde
|
The specimens were free of macroscopic signs of disease or inflammation
|
| Sample_geo_accession | GSM267896
| | Sample_status | Public on Feb 28 2008
| | Sample_submission_date | Feb 25 2008
| | Sample_last_update_date | Feb 27 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA extraction protocol with proteinase K digestion of cellular extract
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix 2-cycle amplification and labeling protocol
| | Sample_hyb_protocol | 16 hr at 55rpm in an Affymetrix hybridization oven at 45C
| | Sample_scan_protocol | 100 format, Affymetrix scanner 3000
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL1352
| | Sample_contact_name | Michael,,George
| | Sample_contact_email | mdgeorge@ucdavis.edu
| | Sample_contact_phone | 5307547242
| | Sample_contact_laboratory | School of Medicine
| | Sample_contact_department | Microarray Core Facility
| | Sample_contact_institute | University of California, Davis
| | Sample_contact_address | One Shields Ave
| | Sample_contact_city | Davis
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 95616
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267896/suppl/GSM267896.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267896/suppl/GSM267896.CHP.gz
| | Sample_series_id | GSE10629
| | Sample_data_row_count | 61359
| | |
|
GSM267897 | GPL1352 |
|
Human ileum villus epithelium P3
|
Ileal tissue biopsies
|
Sample was obtained from individual undergoing surgery for colon cancer, bowel obstruction, or other non-inflammatory conditions. Fixed overnight in 4% (w/v) paraformaldehyde
|
The specimens were free of macroscopic signs of disease or inflammation
|
| Sample_geo_accession | GSM267897
| | Sample_status | Public on Feb 28 2008
| | Sample_submission_date | Feb 25 2008
| | Sample_last_update_date | Feb 27 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA extraction protocol with proteinase K digestion of cellular extract
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix 2-cycle amplification and labeling protocol
| | Sample_hyb_protocol | 16 hr at 55rpm in an Affymetrix hybridization oven at 45C
| | Sample_scan_protocol | 100 format, Affymetrix scanner 3000
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL1352
| | Sample_contact_name | Michael,,George
| | Sample_contact_email | mdgeorge@ucdavis.edu
| | Sample_contact_phone | 5307547242
| | Sample_contact_laboratory | School of Medicine
| | Sample_contact_department | Microarray Core Facility
| | Sample_contact_institute | University of California, Davis
| | Sample_contact_address | One Shields Ave
| | Sample_contact_city | Davis
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 95616
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267897/suppl/GSM267897.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267897/suppl/GSM267897.CHP.gz
| | Sample_series_id | GSE10629
| | Sample_data_row_count | 61359
| | |
|
GSM267898 | GPL1352 |
|
Human ileum crypt epithelium P3
|
Ileal tissue biopsies
|
Sample was obtained from individual undergoing surgery for colon cancer, bowel obstruction, or other non-inflammatory conditions. Fixed overnight in 4% (w/v) paraformaldehyde
|
The specimens were free of macroscopic signs of disease or inflammation
|
| Sample_geo_accession | GSM267898
| | Sample_status | Public on Feb 28 2008
| | Sample_submission_date | Feb 25 2008
| | Sample_last_update_date | Feb 27 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA extraction protocol with proteinase K digestion of cellular extract
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix 2-cycle amplification and labeling protocol
| | Sample_hyb_protocol | 16 hr at 55rpm in an Affymetrix hybridization oven at 45C
| | Sample_scan_protocol | 100 format, Affymetrix scanner 3000
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL1352
| | Sample_contact_name | Michael,,George
| | Sample_contact_email | mdgeorge@ucdavis.edu
| | Sample_contact_phone | 5307547242
| | Sample_contact_laboratory | School of Medicine
| | Sample_contact_department | Microarray Core Facility
| | Sample_contact_institute | University of California, Davis
| | Sample_contact_address | One Shields Ave
| | Sample_contact_city | Davis
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 95616
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267898/suppl/GSM267898.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267898/suppl/GSM267898.CHP.gz
| | Sample_series_id | GSE10629
| | Sample_data_row_count | 61359
| | |
|
GSM267901 | GPL1352 |
|
Human ileum villus epithelium P4
|
Ileal tissue biopsies
|
Sample was obtained from individual undergoing surgery for colon cancer, bowel obstruction, or other non-inflammatory conditions. Fixed overnight in 4% (w/v) paraformaldehyde
|
The specimens were free of macroscopic signs of disease or inflammation
|
| Sample_geo_accession | GSM267901
| | Sample_status | Public on Feb 28 2008
| | Sample_submission_date | Feb 25 2008
| | Sample_last_update_date | Feb 27 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA extraction protocol with proteinase K digestion of cellular extract
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix 2-cycle amplification and labeling protocol
| | Sample_hyb_protocol | 16 hr at 55rpm in an Affymetrix hybridization oven at 45C
| | Sample_scan_protocol | 100 format, Affymetrix scanner 3000
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL1352
| | Sample_contact_name | Michael,,George
| | Sample_contact_email | mdgeorge@ucdavis.edu
| | Sample_contact_phone | 5307547242
| | Sample_contact_laboratory | School of Medicine
| | Sample_contact_department | Microarray Core Facility
| | Sample_contact_institute | University of California, Davis
| | Sample_contact_address | One Shields Ave
| | Sample_contact_city | Davis
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 95616
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267901/suppl/GSM267901.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM267nnn/GSM267901/suppl/GSM267901.CHP.gz
| | Sample_series_id | GSE10629
| | Sample_data_row_count | 61359
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