Search results for the GEO ID: GSE10765  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM271850 | GPL1261 |
|
Wild-type_macrophages_0h
|
wild-type macrophages unstimulated
|
wild-type macrophages unstimulated
|
Gene expression data from unstimulated wild-type macrophages
|
| Sample_geo_accession | GSM271850
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271850/suppl/GSM271850.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271851 | GPL1261 |
|
Wild-type_macrophages_2h
|
wild-type macrophages stimulated with MALP-2 for 2 h
|
wild-type macrophages stimulated with MALP-2 for 2 h
|
Gene expression data from wild-type macrophages stimulated with MALP-2 for 2h
|
| Sample_geo_accession | GSM271851
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271851/suppl/GSM271851.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271852 | GPL1261 |
|
Wild-type_macrophages_4h
|
wild-type macrophages stimulated with MALP-2 for 4 h
|
wild-type macrophages stimulated with MALP-2 for 4 h
|
Gene expression data from wild-type macrophages stimulated with MALP-2 for 4h
|
| Sample_geo_accession | GSM271852
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271852/suppl/GSM271852.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271853 | GPL1261 |
|
Wild-type_macrophages_8h
|
wild-type macrophages stimulated with MALP-2 for 8 h
|
wild-type macrophages stimulated with MALP-2 for 8 h
|
Gene expression data from wild-type macrophages stimulated with MALP-2 for 8h
|
| Sample_geo_accession | GSM271853
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271853/suppl/GSM271853.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271854 | GPL1261 |
|
IRAK2 KO_macrophages_0h
|
IRAK2 KO macrophages unstimulated
|
IRAK2 KO macrophages unstimulated
|
Gene expression data from unstimulated IRAK2 KO macrophages
|
| Sample_geo_accession | GSM271854
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271854/suppl/GSM271854.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271855 | GPL1261 |
|
IRAK2 KO_macrophages_2h
|
IRAK2 KO macrophages stimulated with MALP-2 for 2 h
|
IRAK2 KO macrophages stimulated with MALP-2 for 2 h
|
Gene expression data from IRAK2 KO macrophages stimulated with MALP-2 for 2h
|
| Sample_geo_accession | GSM271855
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271855/suppl/GSM271855.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271856 | GPL1261 |
|
IRAK2 KO_macrophages_4h
|
IRAK2 KO macrophages stimulated with MALP-2 for 4 h
|
IRAK2 KO macrophages stimulated with MALP-2 for 4 h
|
Gene expression data from IRAK2 KO macrophages stimulated with MALP-2 for 4h
|
| Sample_geo_accession | GSM271856
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271856/suppl/GSM271856.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271857 | GPL1261 |
|
IRAK2 KO_macrophages_8h
|
IRAK2 KO macrophages stimulated with MALP-2 for 8 h
|
IRAK2 KO macrophages stimulated with MALP-2 for 8 h
|
Gene expression data from IRAK2 KO macrophages stimulated with MALP-2 for 8h
|
| Sample_geo_accession | GSM271857
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271857/suppl/GSM271857.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271858 | GPL1261 |
|
IRAK1/IRAK2 KO_macrophages_0h
|
IRAK1/IRAK2 KO macrophages unstimulated
|
IRAK1/IRAK2 KO macrophages unstimulated
|
Gene expression data from unstimulated IRAK1/IRAK2 KO macrophages
|
| Sample_geo_accession | GSM271858
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271858/suppl/GSM271858.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271859 | GPL1261 |
|
IRAK1/IRAK2 KO_macrophages_2h
|
IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 2 h
|
IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 2 h
|
Gene expression data from IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 2h
|
| Sample_geo_accession | GSM271859
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271859/suppl/GSM271859.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
| | |
|
GSM271860 | GPL1261 |
|
IRAK1/IRAK2 KO_macrophages_4h
|
IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 4 h
|
IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 4 h
|
Gene expression data from IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 4h
|
| Sample_geo_accession | GSM271860
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271860/suppl/GSM271860.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
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GSM271861 | GPL1261 |
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IRAK1/IRAK2 KO_macrophages_8h
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IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 8 h
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IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 8 h
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Gene expression data from IRAK1/IRAK2 KO macrophages stimulated with MALP-2 for 8h
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| Sample_geo_accession | GSM271861
| | Sample_status | Public on Mar 08 2008
| | Sample_submission_date | Mar 07 2008
| | Sample_last_update_date | Mar 07 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml MALP-2 for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | slides were scanned using the Affymetrix GeneChip scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM271nnn/GSM271861/suppl/GSM271861.CEL.gz
| | Sample_series_id | GSE10765
| | Sample_data_row_count | 45101
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