Search results for the GEO ID: GSE10848 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM275315 | GPL1261 |
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WT 1 1508
|
WT 1 1508
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wild type
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Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
|
Sample_geo_accession | GSM275315
| Sample_status | Public on Mar 04 2009
| Sample_submission_date | Mar 14 2008
| Sample_last_update_date | Mar 04 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
| Sample_hyb_protocol | Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
| Sample_scan_protocol | GeneChips were scanned using the Affymetric Gene-Array scanner 3000
| Sample_data_processing | The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
| Sample_platform_id | GPL1261
| Sample_contact_name | Michael ,P,Lisanti
| Sample_contact_email | michael.lisanti@jeffersons.edu
| Sample_contact_laboratory | Cancer Biology
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Thomas Jefferson University
| Sample_contact_address | 233 S. 10th St BLSB 939
| Sample_contact_city | Philadelphia
| Sample_contact_state | PA
| Sample_contact_zip/postal_code | 19107
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM275nnn/GSM275315/suppl/GSM275315.CEL.gz
| Sample_series_id | GSE10848
| Sample_series_id | GSE10849
| Sample_data_row_count | 45101
| |
|
GSM275316 | GPL1261 |
|
WT 2 1509
|
WT 2 1509
|
wild type
|
Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
|
Sample_geo_accession | GSM275316
| Sample_status | Public on Mar 04 2009
| Sample_submission_date | Mar 14 2008
| Sample_last_update_date | Mar 04 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
| Sample_hyb_protocol | Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
| Sample_scan_protocol | GeneChips were scanned using the Affymetric Gene-Array scanner 3000
| Sample_data_processing | The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
| Sample_platform_id | GPL1261
| Sample_contact_name | Michael ,P,Lisanti
| Sample_contact_email | michael.lisanti@jeffersons.edu
| Sample_contact_laboratory | Cancer Biology
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Thomas Jefferson University
| Sample_contact_address | 233 S. 10th St BLSB 939
| Sample_contact_city | Philadelphia
| Sample_contact_state | PA
| Sample_contact_zip/postal_code | 19107
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM275nnn/GSM275316/suppl/GSM275316.CEL.gz
| Sample_series_id | GSE10848
| Sample_series_id | GSE10849
| Sample_data_row_count | 45101
| |
|
GSM275317 | GPL1261 |
|
WT 3 1782
|
WT 3 1782
|
wild type
|
Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
|
Sample_geo_accession | GSM275317
| Sample_status | Public on Mar 04 2009
| Sample_submission_date | Mar 14 2008
| Sample_last_update_date | Mar 04 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
| Sample_hyb_protocol | Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
| Sample_scan_protocol | GeneChips were scanned using the Affymetric Gene-Array scanner 3000
| Sample_data_processing | The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
| Sample_platform_id | GPL1261
| Sample_contact_name | Michael ,P,Lisanti
| Sample_contact_email | michael.lisanti@jeffersons.edu
| Sample_contact_laboratory | Cancer Biology
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Thomas Jefferson University
| Sample_contact_address | 233 S. 10th St BLSB 939
| Sample_contact_city | Philadelphia
| Sample_contact_state | PA
| Sample_contact_zip/postal_code | 19107
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM275nnn/GSM275317/suppl/GSM275317.CEL.gz
| Sample_series_id | GSE10848
| Sample_series_id | GSE10849
| Sample_data_row_count | 45101
| |
|
GSM275321 | GPL1261 |
|
Cav3KO 1504
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Cav3KO 1504
|
Cav3 knockout
|
Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
|
Sample_geo_accession | GSM275321
| Sample_status | Public on Mar 04 2009
| Sample_submission_date | Mar 14 2008
| Sample_last_update_date | Mar 04 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
| Sample_hyb_protocol | Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
| Sample_scan_protocol | GeneChips were scanned using the Affymetric Gene-Array scanner 3000
| Sample_data_processing | The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
| Sample_platform_id | GPL1261
| Sample_contact_name | Michael ,P,Lisanti
| Sample_contact_email | michael.lisanti@jeffersons.edu
| Sample_contact_laboratory | Cancer Biology
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Thomas Jefferson University
| Sample_contact_address | 233 S. 10th St BLSB 939
| Sample_contact_city | Philadelphia
| Sample_contact_state | PA
| Sample_contact_zip/postal_code | 19107
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM275nnn/GSM275321/suppl/GSM275321.CEL.gz
| Sample_series_id | GSE10848
| Sample_data_row_count | 45101
| |
|
GSM275322 | GPL1261 |
|
Cav3KO 1505
|
Cav3KO 1505
|
Cav3 knockout
|
Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
|
Sample_geo_accession | GSM275322
| Sample_status | Public on Mar 04 2009
| Sample_submission_date | Mar 14 2008
| Sample_last_update_date | Mar 04 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
| Sample_hyb_protocol | Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
| Sample_scan_protocol | GeneChips were scanned using the Affymetric Gene-Array scanner 3000
| Sample_data_processing | The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
| Sample_platform_id | GPL1261
| Sample_contact_name | Michael ,P,Lisanti
| Sample_contact_email | michael.lisanti@jeffersons.edu
| Sample_contact_laboratory | Cancer Biology
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Thomas Jefferson University
| Sample_contact_address | 233 S. 10th St BLSB 939
| Sample_contact_city | Philadelphia
| Sample_contact_state | PA
| Sample_contact_zip/postal_code | 19107
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM275nnn/GSM275322/suppl/GSM275322.CEL.gz
| Sample_series_id | GSE10848
| Sample_data_row_count | 45101
| |
|
GSM275323 | GPL1261 |
|
Cav3KO 1506
|
Cav3KO 1506
|
Cav3 knockout
|
Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
|
Sample_geo_accession | GSM275323
| Sample_status | Public on Mar 04 2009
| Sample_submission_date | Mar 14 2008
| Sample_last_update_date | Mar 04 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
| Sample_hyb_protocol | Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
| Sample_scan_protocol | GeneChips were scanned using the Affymetric Gene-Array scanner 3000
| Sample_data_processing | The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
| Sample_platform_id | GPL1261
| Sample_contact_name | Michael ,P,Lisanti
| Sample_contact_email | michael.lisanti@jeffersons.edu
| Sample_contact_laboratory | Cancer Biology
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Thomas Jefferson University
| Sample_contact_address | 233 S. 10th St BLSB 939
| Sample_contact_city | Philadelphia
| Sample_contact_state | PA
| Sample_contact_zip/postal_code | 19107
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM275nnn/GSM275323/suppl/GSM275323.CEL.gz
| Sample_series_id | GSE10848
| Sample_data_row_count | 45101
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