Search results for the GEO ID: GSE10923  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM276884 | GPL1355 |
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Vehicle control PBS
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Sprague-Dawley rats treated with PBS
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Brain tissue
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none
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| Sample_geo_accession | GSM276884
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Mar 24 2008
| | Sample_last_update_date | Mar 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hippocampi were axtracted and quickly frozen. RNA extraction was done on all of the samples simultaneously.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNAeasy kit was used
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix 2-cycle protocol from 500 ng total RNA (Expression Analysis Technical Manual v2, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 12 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 7G scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 250.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Illana,,Gozes
| | Sample_contact_email | igozes@post.tau.ac.il
| | Sample_contact_phone | 972-3-640-7240
| | Sample_contact_fax | 972-3-640-8541
| | Sample_contact_laboratory | Gidor Chair, Elton (Elbaum) Lab
| | Sample_contact_institute | Tel Aviv University
| | Sample_contact_address | Einstein
| | Sample_contact_city | Tel Aviv
| | Sample_contact_zip/postal_code | 69978
| | Sample_contact_country | Israel
| | Sample_contact_web_link | http://www.tau.ac.il/medicine/biochemistry/gozes.html
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276884/suppl/GSM276884.CEL.gz
| | Sample_series_id | GSE10923
| | Sample_data_row_count | 31099
| | |
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GSM276885 | GPL1355 |
|
Kainate KA
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Sprague-Dawley rats treated with KA
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Brain tissue
|
none
|
| Sample_geo_accession | GSM276885
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Mar 24 2008
| | Sample_last_update_date | Mar 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hippocampi were axtracted and quickly frozen. RNA extraction was done on all of the samples simultaneously.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNAeasy kit was used
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix 2-cycle protocol from 500 ng total RNA (Expression Analysis Technical Manual v2, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 12 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 7G scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 250.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Illana,,Gozes
| | Sample_contact_email | igozes@post.tau.ac.il
| | Sample_contact_phone | 972-3-640-7240
| | Sample_contact_fax | 972-3-640-8541
| | Sample_contact_laboratory | Gidor Chair, Elton (Elbaum) Lab
| | Sample_contact_institute | Tel Aviv University
| | Sample_contact_address | Einstein
| | Sample_contact_city | Tel Aviv
| | Sample_contact_zip/postal_code | 69978
| | Sample_contact_country | Israel
| | Sample_contact_web_link | http://www.tau.ac.il/medicine/biochemistry/gozes.html
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276885/suppl/GSM276885.CEL.gz
| | Sample_series_id | GSE10923
| | Sample_data_row_count | 31099
| | |
|
GSM276886 | GPL1355 |
|
Kainate and neuroprotective peptide KN (KA+NAP)
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Sprague-Dawley rats treated with KA and NAP
|
Brain tissue
|
none
|
| Sample_geo_accession | GSM276886
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Mar 24 2008
| | Sample_last_update_date | Mar 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hippocampi were axtracted and quickly frozen. RNA extraction was done on all of the samples simultaneously.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNAeasy kit was used
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix 2-cycle protocol from 500 ng total RNA (Expression Analysis Technical Manual v2, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 12 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 7G scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 250.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Illana,,Gozes
| | Sample_contact_email | igozes@post.tau.ac.il
| | Sample_contact_phone | 972-3-640-7240
| | Sample_contact_fax | 972-3-640-8541
| | Sample_contact_laboratory | Gidor Chair, Elton (Elbaum) Lab
| | Sample_contact_institute | Tel Aviv University
| | Sample_contact_address | Einstein
| | Sample_contact_city | Tel Aviv
| | Sample_contact_zip/postal_code | 69978
| | Sample_contact_country | Israel
| | Sample_contact_web_link | http://www.tau.ac.il/medicine/biochemistry/gozes.html
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276886/suppl/GSM276886.CEL.gz
| | Sample_series_id | GSE10923
| | Sample_data_row_count | 31099
| | |
|
GSM276887 | GPL1355 |
|
Neuroprotective peptide NAP
|
Sprague-Dawley rats treated with NAP
|
Brain tissue
|
none
|
| Sample_geo_accession | GSM276887
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Mar 24 2008
| | Sample_last_update_date | Mar 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hippocampi were axtracted and quickly frozen. RNA extraction was done on all of the samples simultaneously.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNAeasy kit was used
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix 2-cycle protocol from 500 ng total RNA (Expression Analysis Technical Manual v2, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 12 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 7G scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 250.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Illana,,Gozes
| | Sample_contact_email | igozes@post.tau.ac.il
| | Sample_contact_phone | 972-3-640-7240
| | Sample_contact_fax | 972-3-640-8541
| | Sample_contact_laboratory | Gidor Chair, Elton (Elbaum) Lab
| | Sample_contact_institute | Tel Aviv University
| | Sample_contact_address | Einstein
| | Sample_contact_city | Tel Aviv
| | Sample_contact_zip/postal_code | 69978
| | Sample_contact_country | Israel
| | Sample_contact_web_link | http://www.tau.ac.il/medicine/biochemistry/gozes.html
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276887/suppl/GSM276887.CEL.gz
| | Sample_series_id | GSE10923
| | Sample_data_row_count | 31099
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