Search results for the GEO ID: GSE10924 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM276899 | GPL201 |
|
Patient 101141 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276899
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276899/suppl/GSM276899.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276900 | GPL201 |
|
Patient 101141 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276900
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276900/suppl/GSM276900.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276901 | GPL201 |
|
Patient 101774 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276901
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276901/suppl/GSM276901.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276902 | GPL201 |
|
Patient 101774 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276902
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276902/suppl/GSM276902.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276903 | GPL201 |
|
Patient 102128 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276903
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276903/suppl/GSM276903.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276904 | GPL201 |
|
Patient 102128 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276904
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276904/suppl/GSM276904.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276905 | GPL201 |
|
Patient 108036 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276905
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276905/suppl/GSM276905.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276906 | GPL201 |
|
Patient 108036 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276906
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276906/suppl/GSM276906.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276907 | GPL201 |
|
Patient 108037 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276907
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276907/suppl/GSM276907.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276908 | GPL201 |
|
Patient 108037 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276908
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276908/suppl/GSM276908.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276909 | GPL201 |
|
Patient 121522 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276909
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276909/suppl/GSM276909.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276910 | GPL201 |
|
Patient 121522 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276910
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276910/suppl/GSM276910.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276911 | GPL201 |
|
Patient 220946 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276911
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276911/suppl/GSM276911.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276912 | GPL201 |
|
Patient 220946 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276912
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276912/suppl/GSM276912.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276913 | GPL201 |
|
Patient 272221 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276913
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276913/suppl/GSM276913.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276914 | GPL201 |
|
Patient 272221 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276914
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276914/suppl/GSM276914.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276915 | GPL201 |
|
Patient 272384 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276915
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276915/suppl/GSM276915.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276916 | GPL201 |
|
Patient 272384 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276916
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276916/suppl/GSM276916.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276917 | GPL201 |
|
Patient 272385 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276917
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276917/suppl/GSM276917.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276918 | GPL201 |
|
Patient 272385 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276918
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276918/suppl/GSM276918.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276919 | GPL201 |
|
Patient 272386 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276919
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276919/suppl/GSM276919.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276920 | GPL201 |
|
Patient 272386 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276920
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276920/suppl/GSM276920.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276921 | GPL201 |
|
Patient 321183 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276921
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276921/suppl/GSM276921.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276922 | GPL201 |
|
Patient 321183 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276922
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276922/suppl/GSM276922.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276923 | GPL201 |
|
Patient 373698 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276923
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276923/suppl/GSM276923.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276924 | GPL201 |
|
Patient 373698 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276924
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276924/suppl/GSM276924.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276925 | GPL201 |
|
Patient 373713 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276925
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276925/suppl/GSM276925.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276926 | GPL201 |
|
Patient 373713 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276926
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276926/suppl/GSM276926.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276927 | GPL201 |
|
Patient 373722 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276927
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276927/suppl/GSM276927.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276928 | GPL201 |
|
Patient 373722 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276928
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276928/suppl/GSM276928.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276929 | GPL201 |
|
Patient 373734 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276929
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276929/suppl/GSM276929.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276930 | GPL201 |
|
Patient 373734 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276930
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276930/suppl/GSM276930.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276931 | GPL201 |
|
Patient 43379 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276931
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276931/suppl/GSM276931.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276932 | GPL201 |
|
Patient 43379 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276932
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276932/suppl/GSM276932.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276933 | GPL201 |
|
Patient 44624 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276933
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276933/suppl/GSM276933.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276934 | GPL201 |
|
Patient 44624 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276934
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276934/suppl/GSM276934.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276935 | GPL201 |
|
Patient 51284 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276935
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276935/suppl/GSM276935.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276936 | GPL201 |
|
Patient 51284 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276936
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276936/suppl/GSM276936.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276937 | GPL201 |
|
Patient 520819 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276937
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276937/suppl/GSM276937.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276938 | GPL201 |
|
Patient 520819 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276938
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276938/suppl/GSM276938.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276939 | GPL201 |
|
Patient 70466 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276939
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276939/suppl/GSM276939.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276940 | GPL201 |
|
Patient 70466 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276940
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276940/suppl/GSM276940.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276941 | GPL201 |
|
Patient 72701 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276941
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276941/suppl/GSM276941.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276942 | GPL201 |
|
Patient 72701 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276942
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276942/suppl/GSM276942.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276943 | GPL201 |
|
Patient 83221 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276943
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276943/suppl/GSM276943.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276944 | GPL201 |
|
Patient 83221 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276944
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276944/suppl/GSM276944.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276945 | GPL201 |
|
Patient 83241 at week 0
|
PBMC samples at week 0
|
This sample is from Good outcome group at week 0
|
Gene expression data from patients with Good outcome at week 0 time point
|
Sample_geo_accession | GSM276945
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276945/suppl/GSM276945.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276946 | GPL201 |
|
Patient 83241 at week 24
|
PBMC samples at week 24
|
This sample is from Good outcome group at week 24
|
Gene expression data from patients with Good outcome at week 24 time point
|
Sample_geo_accession | GSM276946
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276946/suppl/GSM276946.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276947 | GPL201 |
|
Patient 108041 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276947
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276947/suppl/GSM276947.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276948 | GPL201 |
|
Patient 108041 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276948
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276948/suppl/GSM276948.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276949 | GPL201 |
|
Patient 108046 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276949
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276949/suppl/GSM276949.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276950 | GPL201 |
|
Patient 108046 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276950
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276950/suppl/GSM276950.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276951 | GPL201 |
|
Patient 108053 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276951
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276951/suppl/GSM276951.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276952 | GPL201 |
|
Patient 108053 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276952
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276952/suppl/GSM276952.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276953 | GPL201 |
|
Patient 141612 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276953
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276953/suppl/GSM276953.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276954 | GPL201 |
|
Patient 141612 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276954
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276954/suppl/GSM276954.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276955 | GPL201 |
|
Patient 220963 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276955
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276955/suppl/GSM276955.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276956 | GPL201 |
|
Patient 220963 at week 12
|
PBMC samples at week 12
|
This sample is from Poor outcome group at week 12
|
Gene expression data from patients with Poor outcome at week 12 time point
|
Sample_geo_accession | GSM276956
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276956/suppl/GSM276956.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276957 | GPL201 |
|
Patient 281266 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276957
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276957/suppl/GSM276957.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276958 | GPL201 |
|
Patient 281266 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276958
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276958/suppl/GSM276958.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276959 | GPL201 |
|
Patient 281286 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276959
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276959/suppl/GSM276959.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276960 | GPL201 |
|
Patient 281286 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276960
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276960/suppl/GSM276960.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276961 | GPL201 |
|
Patient 291214 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276961
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276961/suppl/GSM276961.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276962 | GPL201 |
|
Patient 291214 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276962
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276962/suppl/GSM276962.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276963 | GPL201 |
|
Patient 321399 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276963
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276963/suppl/GSM276963.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276964 | GPL201 |
|
Patient 321399 at week 18
|
PBMC samples at week 18
|
This sample is from Poor outcome group at week 18
|
Gene expression data from patients with Poor outcome at week 18 time point
|
Sample_geo_accession | GSM276964
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276964/suppl/GSM276964.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276965 | GPL201 |
|
Patient 373679 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276965
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276965/suppl/GSM276965.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276966 | GPL201 |
|
Patient 373679 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276966
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276966/suppl/GSM276966.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276967 | GPL201 |
|
Patient 373700 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276967
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276967/suppl/GSM276967.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276968 | GPL201 |
|
Patient 373700 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276968
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276968/suppl/GSM276968.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276969 | GPL201 |
|
Patient 373707 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276969
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276969/suppl/GSM276969.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276970 | GPL201 |
|
Patient 373707 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276970
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276970/suppl/GSM276970.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276971 | GPL201 |
|
Patient 373718 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276971
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276971/suppl/GSM276971.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276972 | GPL201 |
|
Patient 373718 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276972
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276972/suppl/GSM276972.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276973 | GPL201 |
|
Patient 373732 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276973
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276973/suppl/GSM276973.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276974 | GPL201 |
|
Patient 373732 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276974
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276974/suppl/GSM276974.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276975 | GPL201 |
|
Patient 51270 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276975
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276975/suppl/GSM276975.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276976 | GPL201 |
|
Patient 51270 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276976
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276976/suppl/GSM276976.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276977 | GPL201 |
|
Patient 621409 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276977
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276977/suppl/GSM276977.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276978 | GPL201 |
|
Patient 621409 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276978
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276978/suppl/GSM276978.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276979 | GPL201 |
|
Patient 630694 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276979
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276979/suppl/GSM276979.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276980 | GPL201 |
|
Patient 630694 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276980
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276980/suppl/GSM276980.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276981 | GPL201 |
|
Patient 72708 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276981
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276981/suppl/GSM276981.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276982 | GPL201 |
|
Patient 72708 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276982
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276982/suppl/GSM276982.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276983 | GPL201 |
|
Patient 72710 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276983
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276983/suppl/GSM276983.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276984 | GPL201 |
|
Patient 72710 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276984
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276984/suppl/GSM276984.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276985 | GPL201 |
|
Patient 72719 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276985
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276985/suppl/GSM276985.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276986 | GPL201 |
|
Patient 72719 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276986
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276986/suppl/GSM276986.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276987 | GPL201 |
|
Patient 83224 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276987
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276987/suppl/GSM276987.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276988 | GPL201 |
|
Patient 83224 at week 32
|
PBMC samples at week 32
|
This sample is from Poor outcome group at week 32
|
Gene expression data from patients with Poor outcome at week 32 time point
|
Sample_geo_accession | GSM276988
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276988/suppl/GSM276988.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276989 | GPL201 |
|
Patient 83225 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276989
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276989/suppl/GSM276989.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276990 | GPL201 |
|
Patient 83225 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276990
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276990/suppl/GSM276990.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276991 | GPL201 |
|
Patient 83227 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276991
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276991/suppl/GSM276991.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276992 | GPL201 |
|
Patient 83227 at week 24
|
PBMC samples at week 24
|
This sample is from Poor outcome group at week 24
|
Gene expression data from patients with Poor outcome at week 24 time point
|
Sample_geo_accession | GSM276992
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276992/suppl/GSM276992.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276993 | GPL201 |
|
Patient 83242 at week 0
|
PBMC samples at week 0
|
This sample is from Poor outcome group at week 0
|
Gene expression data from patients with Poor outcome at week 0 time point
|
Sample_geo_accession | GSM276993
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276993/suppl/GSM276993.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
GSM276994 | GPL201 |
|
Patient 83242 at week 12
|
PBMC samples at week 12
|
This sample is from Poor outcome group at week 12
|
Gene expression data from patients with Poor outcome at week 12 time point
|
Sample_geo_accession | GSM276994
| Sample_status | Public on Mar 25 2008
| Sample_submission_date | Mar 24 2008
| Sample_last_update_date | Mar 24 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | PBMC samples from HIV seropositive patients at different time points
| Sample_growth_protocol_ch1 | PBMC samples
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | Follow Affymetrix's protocol
| Sample_scan_protocol | GeneChips were scanned using the GeneArray Scanner
| Sample_data_processing | The data were analyzed using RMA normalization method. Probesets that are "absent" in all samples are eliminated in the laster state of analysis.
| Sample_platform_id | GPL201
| Sample_contact_name | Maryanne,,Vahey
| Sample_contact_email | mvahey@hivresearch.org
| Sample_contact_phone | 301-251-5058
| Sample_contact_fax | 301-762-7460
| Sample_contact_laboratory | Laboratory of Functional Genomics
| Sample_contact_department |
| Sample_contact_institute | Walter Reed Army Institute of Research
| Sample_contact_address | 1600 East Gude Drive
| Sample_contact_city | Rockville
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20850
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM276nnn/GSM276994/suppl/GSM276994.CEL.gz
| Sample_series_id | GSE10924
| Sample_data_row_count | 8793
| |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
|
Select GSMs and click on "Add groups" |
Enter the group name here: |
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