Search results for the GEO ID: GSE11057 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM279572 | GPL570 |
|
Central memory, donor 120604
|
Central memory, donor 120604
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 120604
|
Sample_geo_accession | GSM279572
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279572/suppl/GSM279572.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279572/suppl/GSM279572.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279573 | GPL570 |
|
Central memory, donor 121704
|
Central memory, donor 121704
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 121704
|
Sample_geo_accession | GSM279573
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279573/suppl/GSM279573.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279573/suppl/GSM279573.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279574 | GPL570 |
|
Central memory, donor 11405
|
Central memory, donor 11405
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 11405
|
Sample_geo_accession | GSM279574
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279574/suppl/GSM279574.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279574/suppl/GSM279574.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279575 | GPL570 |
|
Central memory, donor 12405
|
Central memory, donor 12405
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 12405
|
Sample_geo_accession | GSM279575
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279575/suppl/GSM279575.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279575/suppl/GSM279575.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279576 | GPL570 |
|
Central memory, donor 12805
|
Central memory, donor 12805
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 12805
|
Sample_geo_accession | GSM279576
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279576/suppl/GSM279576.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279576/suppl/GSM279576.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279577 | GPL570 |
|
Effector memory, donor 121704
|
Effector memory, donor 121704
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 121704
|
Sample_geo_accession | GSM279577
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279577/suppl/GSM279577.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279577/suppl/GSM279577.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279578 | GPL570 |
|
Effector memory, donor 11405
|
Effector memory, donor 11405
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 11405
|
Sample_geo_accession | GSM279578
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279578/suppl/GSM279578.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279578/suppl/GSM279578.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279579 | GPL570 |
|
Effector memory, donor 12405
|
Effector memory, donor 12405
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 12405
|
Sample_geo_accession | GSM279579
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279579/suppl/GSM279579.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279579/suppl/GSM279579.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279580 | GPL570 |
|
Effector memory, donor 12805
|
Effector memory, donor 12805
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 12805
|
Sample_geo_accession | GSM279580
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279580/suppl/GSM279580.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279580/suppl/GSM279580.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279581 | GPL570 |
|
Naive, donor 121704
|
Naive, donor 121704
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 121704
|
Sample_geo_accession | GSM279581
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279581/suppl/GSM279581.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279581/suppl/GSM279581.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279582 | GPL570 |
|
Naive, donor 11405
|
Naive, donor 11405
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 11405
|
Sample_geo_accession | GSM279582
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279582/suppl/GSM279582.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279582/suppl/GSM279582.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279583 | GPL570 |
|
Naive, donor 12405
|
Naive, donor 12405
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 12405
|
Sample_geo_accession | GSM279583
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279583/suppl/GSM279583.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279583/suppl/GSM279583.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279584 | GPL570 |
|
Naive, donor 12805
|
Naive, donor 12805
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 12805
|
Sample_geo_accession | GSM279584
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Aug 15 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279584/suppl/GSM279584.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279584/suppl/GSM279584.EXP.gz
| Sample_relation | Reanalyzed by: GSE49910
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279585 | GPL570 |
|
PBMCs, donor 121704
|
PBMCs, donor 121704
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 121704
|
Sample_geo_accession | GSM279585
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279585/suppl/GSM279585.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279585/suppl/GSM279585.EXP.gz
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279586 | GPL570 |
|
PBMCs, donor 11405
|
PBMCs, donor 11405
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 11405
|
Sample_geo_accession | GSM279586
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279586/suppl/GSM279586.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279586/suppl/GSM279586.EXP.gz
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279587 | GPL570 |
|
PBMCs, donor 12405
|
PBMCs, donor 12405
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 12405
|
Sample_geo_accession | GSM279587
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279587/suppl/GSM279587.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279587/suppl/GSM279587.EXP.gz
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
GSM279588 | GPL570 |
|
PBMCs, donor 12805
|
PBMCs, donor 12805
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 12805
|
Sample_geo_accession | GSM279588
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Apr 04 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Alex,,Abbas
| Sample_contact_email | abbas@gene.com
| Sample_contact_department | Bioinformatics
| Sample_contact_institute | Genentech, Inc.
| Sample_contact_address | 1 DNA Way
| Sample_contact_city | South San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94080
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279588/suppl/GSM279588.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279588/suppl/GSM279588.EXP.gz
| Sample_series_id | GSE11057
| Sample_series_id | GSE11103
| Sample_data_row_count | 54675
| |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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Select GSMs and click on "Add groups" |
Enter the group name here: |
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