Search results for the GEO ID: GSE11103  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM279572 | GPL570 |
|
Central memory, donor 120604
|
Central memory, donor 120604
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 120604
|
| Sample_geo_accession | GSM279572
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279572/suppl/GSM279572.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279572/suppl/GSM279572.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279573 | GPL570 |
|
Central memory, donor 121704
|
Central memory, donor 121704
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 121704
|
| Sample_geo_accession | GSM279573
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279573/suppl/GSM279573.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279573/suppl/GSM279573.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279574 | GPL570 |
|
Central memory, donor 11405
|
Central memory, donor 11405
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 11405
|
| Sample_geo_accession | GSM279574
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279574/suppl/GSM279574.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279574/suppl/GSM279574.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279575 | GPL570 |
|
Central memory, donor 12405
|
Central memory, donor 12405
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 12405
|
| Sample_geo_accession | GSM279575
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279575/suppl/GSM279575.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279575/suppl/GSM279575.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279576 | GPL570 |
|
Central memory, donor 12805
|
Central memory, donor 12805
|
Central memory
purified cells
|
Gene expression data on Central memory cells from donor 12805
|
| Sample_geo_accession | GSM279576
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279576/suppl/GSM279576.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279576/suppl/GSM279576.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279577 | GPL570 |
|
Effector memory, donor 121704
|
Effector memory, donor 121704
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 121704
|
| Sample_geo_accession | GSM279577
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279577/suppl/GSM279577.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279577/suppl/GSM279577.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279578 | GPL570 |
|
Effector memory, donor 11405
|
Effector memory, donor 11405
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 11405
|
| Sample_geo_accession | GSM279578
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279578/suppl/GSM279578.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279578/suppl/GSM279578.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279579 | GPL570 |
|
Effector memory, donor 12405
|
Effector memory, donor 12405
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 12405
|
| Sample_geo_accession | GSM279579
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279579/suppl/GSM279579.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279579/suppl/GSM279579.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279580 | GPL570 |
|
Effector memory, donor 12805
|
Effector memory, donor 12805
|
Effector memory
purified cells
|
Gene expression data on Effector memory cells from donor 12805
|
| Sample_geo_accession | GSM279580
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279580/suppl/GSM279580.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279580/suppl/GSM279580.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279581 | GPL570 |
|
Naive, donor 121704
|
Naive, donor 121704
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 121704
|
| Sample_geo_accession | GSM279581
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279581/suppl/GSM279581.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279581/suppl/GSM279581.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279582 | GPL570 |
|
Naive, donor 11405
|
Naive, donor 11405
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 11405
|
| Sample_geo_accession | GSM279582
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279582/suppl/GSM279582.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279582/suppl/GSM279582.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279583 | GPL570 |
|
Naive, donor 12405
|
Naive, donor 12405
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 12405
|
| Sample_geo_accession | GSM279583
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279583/suppl/GSM279583.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279583/suppl/GSM279583.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279584 | GPL570 |
|
Naive, donor 12805
|
Naive, donor 12805
|
Naive
purified cells
|
Gene expression data on Naive cells from donor 12805
|
| Sample_geo_accession | GSM279584
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279584/suppl/GSM279584.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279584/suppl/GSM279584.EXP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279585 | GPL570 |
|
PBMCs, donor 121704
|
PBMCs, donor 121704
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 121704
|
| Sample_geo_accession | GSM279585
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279585/suppl/GSM279585.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279585/suppl/GSM279585.EXP.gz
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279586 | GPL570 |
|
PBMCs, donor 11405
|
PBMCs, donor 11405
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 11405
|
| Sample_geo_accession | GSM279586
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279586/suppl/GSM279586.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279586/suppl/GSM279586.EXP.gz
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279587 | GPL570 |
|
PBMCs, donor 12405
|
PBMCs, donor 12405
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 12405
|
| Sample_geo_accession | GSM279587
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279587/suppl/GSM279587.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279587/suppl/GSM279587.EXP.gz
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279588 | GPL570 |
|
PBMCs, donor 12805
|
PBMCs, donor 12805
|
PBMCs
mixed cells
|
Gene expression data on PBMCs from donor 12805
|
| Sample_geo_accession | GSM279588
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279588/suppl/GSM279588.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279588/suppl/GSM279588.EXP.gz
| | Sample_series_id | GSE11057
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279589 | GPL570 |
|
PRB12534 Jurkat
|
PRB12534 Jurkat
|
Jurkat
purified cells
|
PRB12534 Jurkat
|
| Sample_geo_accession | GSM279589
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279589/suppl/GSM279589.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279589/suppl/GSM279589.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279590 | GPL570 |
|
PRB12535 Jurkat
|
PRB12535 Jurkat
|
Jurkat
purified cells
|
PRB12535 Jurkat
|
| Sample_geo_accession | GSM279590
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279590/suppl/GSM279590.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279590/suppl/GSM279590.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279591 | GPL570 |
|
PRB12536 Jurkat
|
PRB12536 Jurkat
|
Jurkat
purified cells
|
PRB12536 Jurkat
|
| Sample_geo_accession | GSM279591
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279591/suppl/GSM279591.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279591/suppl/GSM279591.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279592 | GPL570 |
|
PRB12537 IM-9
|
PRB12537 IM-9
|
IM-9
purified cells
|
PRB12537 IM-9
|
| Sample_geo_accession | GSM279592
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279592/suppl/GSM279592.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279592/suppl/GSM279592.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279593 | GPL570 |
|
PRB12538 IM-9
|
PRB12538 IM-9
|
IM-9
purified cells
|
PRB12538 IM-9
|
| Sample_geo_accession | GSM279593
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279593/suppl/GSM279593.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279593/suppl/GSM279593.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279594 | GPL570 |
|
PRB12539 IM-9
|
PRB12539 IM-9
|
IM-9
purified cells
|
PRB12539 IM-9
|
| Sample_geo_accession | GSM279594
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279594/suppl/GSM279594.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279594/suppl/GSM279594.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279595 | GPL570 |
|
PRB12540 Raji
|
PRB12540 Raji
|
Raji
purified cells
|
PRB12540 Raji
|
| Sample_geo_accession | GSM279595
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279595/suppl/GSM279595.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279595/suppl/GSM279595.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279596 | GPL570 |
|
PRB12541 Raji
|
PRB12541 Raji
|
Raji
purified cells
|
PRB12541 Raji
|
| Sample_geo_accession | GSM279596
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279596/suppl/GSM279596.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279596/suppl/GSM279596.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279597 | GPL570 |
|
PRB12542 Raji
|
PRB12542 Raji
|
Raji
purified cells
|
PRB12542 Raji
|
| Sample_geo_accession | GSM279597
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279597/suppl/GSM279597.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279597/suppl/GSM279597.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279598 | GPL570 |
|
PRB12543 THP-1
|
PRB12543 THP-1
|
THP-1
purified cells
|
PRB12543 THP-1
|
| Sample_geo_accession | GSM279598
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279598/suppl/GSM279598.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279598/suppl/GSM279598.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279599 | GPL570 |
|
PRB12544 THP-1
|
PRB12544 THP-1
|
THP-1
purified cells
|
PRB12544 THP-1
|
| Sample_geo_accession | GSM279599
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279599/suppl/GSM279599.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279599/suppl/GSM279599.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279600 | GPL570 |
|
PRB12545 THP-1
|
PRB12545 THP-1
|
THP-1
purified cells
|
PRB12545 THP-1
|
| Sample_geo_accession | GSM279600
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279600/suppl/GSM279600.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279600/suppl/GSM279600.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279601 | GPL570 |
|
PRB12546 MixA
|
PRB12546 MixA
|
MixA
mixed cells
|
PRB12546 MixA
|
| Sample_geo_accession | GSM279601
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279601/suppl/GSM279601.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279601/suppl/GSM279601.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279602 | GPL570 |
|
PRB12547 MixA
|
PRB12547 MixA
|
MixA
mixed cells
|
PRB12547 MixA
|
| Sample_geo_accession | GSM279602
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279602/suppl/GSM279602.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279602/suppl/GSM279602.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279603 | GPL570 |
|
PRB12548 MixA
|
PRB12548 MixA
|
MixA
mixed cells
|
PRB12548 MixA
|
| Sample_geo_accession | GSM279603
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279603/suppl/GSM279603.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279603/suppl/GSM279603.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279604 | GPL570 |
|
PRB12549 MixB
|
PRB12549 MixB
|
MixB
mixed cells
|
PRB12549 MixB
|
| Sample_geo_accession | GSM279604
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279604/suppl/GSM279604.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279604/suppl/GSM279604.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279605 | GPL570 |
|
PRB12550 MixB
|
PRB12550 MixB
|
MixB
mixed cells
|
PRB12550 MixB
|
| Sample_geo_accession | GSM279605
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279605/suppl/GSM279605.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279605/suppl/GSM279605.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279606 | GPL570 |
|
PRB12551 MixB
|
PRB12551 MixB
|
MixB
mixed cells
|
PRB12551 MixB
|
| Sample_geo_accession | GSM279606
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279606/suppl/GSM279606.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279606/suppl/GSM279606.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279607 | GPL570 |
|
PRB12552 MixC
|
PRB12552 MixC
|
MixC
mixed cells
|
PRB12552 MixC
|
| Sample_geo_accession | GSM279607
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279607/suppl/GSM279607.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279607/suppl/GSM279607.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279608 | GPL570 |
|
PRB12553 MixC
|
PRB12553 MixC
|
MixC
mixed cells
|
PRB12553 MixC
|
| Sample_geo_accession | GSM279608
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279608/suppl/GSM279608.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279608/suppl/GSM279608.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279609 | GPL570 |
|
PRB12554 MixC
|
PRB12554 MixC
|
MixC
mixed cells
|
PRB12554 MixC
|
| Sample_geo_accession | GSM279609
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279609/suppl/GSM279609.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279609/suppl/GSM279609.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279610 | GPL570 |
|
PRB12555 MixD
|
PRB12555 MixD
|
MixD
mixed cells
|
PRB12555 MixD
|
| Sample_geo_accession | GSM279610
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279610/suppl/GSM279610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279610/suppl/GSM279610.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279611 | GPL570 |
|
PRB12556 MixD
|
PRB12556 MixD
|
MixD
mixed cells
|
PRB12556 MixD
|
| Sample_geo_accession | GSM279611
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279611/suppl/GSM279611.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279611/suppl/GSM279611.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
|
GSM279612 | GPL570 |
|
PRB12557 MixD
|
PRB12557 MixD
|
MixD
mixed cells
|
PRB12557 MixD
|
| Sample_geo_accession | GSM279612
| | Sample_status | Public on Jul 07 2009
| | Sample_submission_date | Apr 04 2008
| | Sample_last_update_date | Jul 07 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | cRNA was hybridized on GeneChip HGU133 plus v2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Alex,,Abbas
| | Sample_contact_email | abbas@gene.com
| | Sample_contact_department | Bioinformatics
| | Sample_contact_institute | Genentech, Inc.
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279612/suppl/GSM279612.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM279nnn/GSM279612/suppl/GSM279612.EXP.gz
| | Sample_series_id | GSE11058
| | Sample_series_id | GSE11103
| | Sample_data_row_count | 54675
| | |
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Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
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