Search results for the GEO ID: GSE11288  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM284949 | GPL339 |
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MBEC_B-oligomer_rep1
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endothelial cells from mouse brain
|
Strain: C57BL/6
Gender: male
Age: 6-9 months
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MBEC_B-oligomer_rep1
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| Sample_geo_accession | GSM284949
| | Sample_status | Public on Apr 29 2009
| | Sample_submission_date | Apr 29 2008
| | Sample_last_update_date | Apr 29 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from MBEC using a RNeasy Total RNA Isolation Kit(QIAgen, Valencia, CA).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was then synthesized followed by an in vitro transcription reaction and fragmentation reaction to produce biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_hyb_protocol | Biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_scan_protocol | The GeneChip array was stained with Streptavidin-Phycoerythrin according to the Affymetrix Technical Manual, and scanned with the GeneChip Scanner GS3000-76.
| | Sample_data_processing | Probe statistics were background-corrected, normalized and summarized using the rma method and affy package of Speed and coworkers.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Jeffrey,P,Bond
| | Sample_contact_department | Microbiology and Molecular Genetics
| | Sample_contact_institute | University of Vermont
| | Sample_contact_address | 95 Carrigan Dri e
| | Sample_contact_city | Burlington
| | Sample_contact_state | VT
| | Sample_contact_zip/postal_code | 05405
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM284nnn/GSM284949/suppl/GSM284949.CEL.gz
| | Sample_series_id | GSE11288
| | Sample_data_row_count | 22690
| | |
|
GSM284950 | GPL339 |
|
MBEC_PBS_rep1
|
endothelial cells from mouse brain
|
Strain: C57BL/6
Gender: male
Age: 6-9 months
|
MBEC_PBS_rep1
|
| Sample_geo_accession | GSM284950
| | Sample_status | Public on Apr 29 2009
| | Sample_submission_date | Apr 29 2008
| | Sample_last_update_date | Apr 29 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from MBEC using a RNeasy Total RNA Isolation Kit(QIAgen, Valencia, CA).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was then synthesized followed by an in vitro transcription reaction and fragmentation reaction to produce biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_hyb_protocol | Biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_scan_protocol | The GeneChip array was stained with Streptavidin-Phycoerythrin according to the Affymetrix Technical Manual, and scanned with the GeneChip Scanner GS3000-76.
| | Sample_data_processing | Probe statistics were background-corrected, normalized and summarized using the rma method and affy package of Speed and coworkers.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Jeffrey,P,Bond
| | Sample_contact_department | Microbiology and Molecular Genetics
| | Sample_contact_institute | University of Vermont
| | Sample_contact_address | 95 Carrigan Dri e
| | Sample_contact_city | Burlington
| | Sample_contact_state | VT
| | Sample_contact_zip/postal_code | 05405
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM284nnn/GSM284950/suppl/GSM284950.CEL.gz
| | Sample_series_id | GSE11288
| | Sample_data_row_count | 22690
| | |
|
GSM284951 | GPL339 |
|
MBEC_PTX_rep1
|
endothelial cells from mouse brain
|
Strain: C57BL/6
Gender: male
Age: 6-9 months
|
MBEC_PTX_rep1
|
| Sample_geo_accession | GSM284951
| | Sample_status | Public on Apr 29 2009
| | Sample_submission_date | Apr 29 2008
| | Sample_last_update_date | Apr 29 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from MBEC using a RNeasy Total RNA Isolation Kit(QIAgen, Valencia, CA).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was then synthesized followed by an in vitro transcription reaction and fragmentation reaction to produce biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_hyb_protocol | Biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_scan_protocol | The GeneChip array was stained with Streptavidin-Phycoerythrin according to the Affymetrix Technical Manual, and scanned with the GeneChip Scanner GS3000-76.
| | Sample_data_processing | Probe statistics were background-corrected, normalized and summarized using the rma method and affy package of Speed and coworkers.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Jeffrey,P,Bond
| | Sample_contact_department | Microbiology and Molecular Genetics
| | Sample_contact_institute | University of Vermont
| | Sample_contact_address | 95 Carrigan Dri e
| | Sample_contact_city | Burlington
| | Sample_contact_state | VT
| | Sample_contact_zip/postal_code | 05405
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM284nnn/GSM284951/suppl/GSM284951.CEL.gz
| | Sample_series_id | GSE11288
| | Sample_data_row_count | 22690
| | |
|
GSM284952 | GPL339 |
|
MBEC_B-oligomer_rep2
|
endothelial cells from mouse brain
|
Strain: C57BL/6
Gender: male
Age: 6-9 months
|
MBEC_B-oligomer_rep2
|
| Sample_geo_accession | GSM284952
| | Sample_status | Public on Apr 29 2009
| | Sample_submission_date | Apr 29 2008
| | Sample_last_update_date | Apr 29 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from MBEC using a RNeasy Total RNA Isolation Kit(QIAgen, Valencia, CA).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was then synthesized followed by an in vitro transcription reaction and fragmentation reaction to produce biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_hyb_protocol | Biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_scan_protocol | The GeneChip array was stained with Streptavidin-Phycoerythrin according to the Affymetrix Technical Manual, and scanned with the GeneChip Scanner GS3000-76.
| | Sample_data_processing | Probe statistics were background-corrected, normalized and summarized using the rma method and affy package of Speed and coworkers.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Jeffrey,P,Bond
| | Sample_contact_department | Microbiology and Molecular Genetics
| | Sample_contact_institute | University of Vermont
| | Sample_contact_address | 95 Carrigan Dri e
| | Sample_contact_city | Burlington
| | Sample_contact_state | VT
| | Sample_contact_zip/postal_code | 05405
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM284nnn/GSM284952/suppl/GSM284952.CEL.gz
| | Sample_series_id | GSE11288
| | Sample_data_row_count | 22690
| | |
|
GSM284953 | GPL339 |
|
MBEC_PBS_rep2
|
endothelial cells from mouse brain
|
Strain: C57BL/6
Gender: male
Age: 6-9 months
|
MBEC_PBS_rep2
|
| Sample_geo_accession | GSM284953
| | Sample_status | Public on Apr 29 2009
| | Sample_submission_date | Apr 29 2008
| | Sample_last_update_date | Apr 29 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from MBEC using a RNeasy Total RNA Isolation Kit(QIAgen, Valencia, CA).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was then synthesized followed by an in vitro transcription reaction and fragmentation reaction to produce biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_hyb_protocol | Biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_scan_protocol | The GeneChip array was stained with Streptavidin-Phycoerythrin according to the Affymetrix Technical Manual, and scanned with the GeneChip Scanner GS3000-76.
| | Sample_data_processing | Probe statistics were background-corrected, normalized and summarized using the rma method and affy package of Speed and coworkers.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Jeffrey,P,Bond
| | Sample_contact_department | Microbiology and Molecular Genetics
| | Sample_contact_institute | University of Vermont
| | Sample_contact_address | 95 Carrigan Dri e
| | Sample_contact_city | Burlington
| | Sample_contact_state | VT
| | Sample_contact_zip/postal_code | 05405
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM284nnn/GSM284953/suppl/GSM284953.CEL.gz
| | Sample_series_id | GSE11288
| | Sample_data_row_count | 22690
| | |
|
GSM284954 | GPL339 |
|
MBEC_PTX_rep2
|
endothelial cells from mouse brain
|
Strain: C57BL/6
Gender: male
Age: 6-9 months
|
MBEC_PTX_rep2
|
| Sample_geo_accession | GSM284954
| | Sample_status | Public on Apr 29 2009
| | Sample_submission_date | Apr 29 2008
| | Sample_last_update_date | Apr 29 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from MBEC using a RNeasy Total RNA Isolation Kit(QIAgen, Valencia, CA).
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was then synthesized followed by an in vitro transcription reaction and fragmentation reaction to produce biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_hyb_protocol | Biotin-labeled cRNA fragments that were hybridized to the probe array at 45°C for 16 hr
| | Sample_scan_protocol | The GeneChip array was stained with Streptavidin-Phycoerythrin according to the Affymetrix Technical Manual, and scanned with the GeneChip Scanner GS3000-76.
| | Sample_data_processing | Probe statistics were background-corrected, normalized and summarized using the rma method and affy package of Speed and coworkers.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Jeffrey,P,Bond
| | Sample_contact_department | Microbiology and Molecular Genetics
| | Sample_contact_institute | University of Vermont
| | Sample_contact_address | 95 Carrigan Dri e
| | Sample_contact_city | Burlington
| | Sample_contact_state | VT
| | Sample_contact_zip/postal_code | 05405
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM284nnn/GSM284954/suppl/GSM284954.CEL.gz
| | Sample_series_id | GSE11288
| | Sample_data_row_count | 22690
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