Search results for the GEO ID: GSE1133  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM18865 | GPL96 |
|
3AMH02022201_Colorectal Adenocarc
|
3AMH02022201_Colorectal Adenocarc
|
3AMH02022201_Colorectal Adenocarc
|
Colorectal Adenocarc
|
| Sample_geo_accession | GSM18865
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18865/suppl/GSM18865.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18866 | GPL96 |
|
3AMH02030601_Colorectal Adenocarcinoma
|
3AMH02030601_Colorectal Adenocarcinoma
|
3AMH02030601_Colorectal Adenocarcinoma
|
Colorectal Adenocarcinoma
|
| Sample_geo_accession | GSM18866
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18866/suppl/GSM18866.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18867 | GPL96 |
|
3AJZ02052318_WHOLEBLOOD(JJV)
|
3AJZ02052318_WHOLEBLOOD(JJV)
|
3AJZ02052318_WHOLEBLOOD(JJV)
|
WHOLEBLOOD
|
| Sample_geo_accession | GSM18867
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18867/suppl/GSM18867.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18868 | GPL96 |
|
3AJZ02052320_WHOLEBLOOD(JJV)
|
3AJZ02052320_WHOLEBLOOD(JJV)
|
3AJZ02052320_WHOLEBLOOD(JJV)
|
WHOLEBLOOD
|
| Sample_geo_accession | GSM18868
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18868/suppl/GSM18868.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18869 | GPL96 |
|
3AMH02082105_BM_CD33Myeloid
|
3AMH02082105_BM_CD33Myeloid
|
3AMH02082105_BM_CD33Myeloid
|
bone marrow-CD33Myeloid
|
| Sample_geo_accession | GSM18869
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18869/suppl/GSM18869.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18870 | GPL96 |
|
3AMH02082106_BM_CD33Myeloid
|
3AMH02082106_BM_CD33Myeloid
|
3AMH02082106_BM_CD33Myeloid
|
bone marrow-CD33Myeloid
|
| Sample_geo_accession | GSM18870
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18870/suppl/GSM18870.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18871 | GPL96 |
|
3AMH02082315_PB_CD14Monocytes
|
3AMH02082315_PB_CD14Monocytes
|
3AMH02082315_PB_CD14Monocytes
|
peripheral blood-CD14Monocytes
|
| Sample_geo_accession | GSM18871
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18871/suppl/GSM18871.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18872 | GPL96 |
|
3AMH02082316_PB_CD14Monocytes
|
3AMH02082316_PB_CD14Monocytes
|
3AMH02082316_PB_CD14Monocytes
|
peripheral blood-CD14Monocytes
|
| Sample_geo_accession | GSM18872
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18872/suppl/GSM18872.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18873 | GPL96 |
|
3AMH02082012_PB_BDCA4DentriticCells
|
3AMH02082012_PB_BDCA4DentriticCells
|
3AMH02082012_PB_BDCA4DentriticCells
|
peripheral blood-BDCA4DentriticCells
|
| Sample_geo_accession | GSM18873
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18873/suppl/GSM18873.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18874 | GPL96 |
|
3AMH02082111_PB_BDCA4DentriticCells
|
3AMH02082111_PB_BDCA4DentriticCells
|
3AMH02082111_PB_BDCA4DentriticCells
|
peripheral blood-BDCA4DentriticCells
|
| Sample_geo_accession | GSM18874
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18874/suppl/GSM18874.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18875 | GPL96 |
|
3AMH02082109_PB_CD56NKCells
|
3AMH02082109_PB_CD56NKCells
|
3AMH02082109_PB_CD56NKCells
|
peripheral blood-CD56NKCells
|
| Sample_geo_accession | GSM18875
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18875/suppl/GSM18875.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18876 | GPL96 |
|
3AMH02082110_PB_CD56NKCells
|
3AMH02082110_PB_CD56NKCells
|
3AMH02082110_PB_CD56NKCells
|
peripheral blood-CD56NKCells
|
| Sample_geo_accession | GSM18876
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18876/suppl/GSM18876.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18877 | GPL96 |
|
3AMH02082803_PB_CD4TCells
|
3AMH02082803_PB_CD4TCells
|
3AMH02082803_PB_CD4TCells
|
peripheral blood-CD4TCells
|
| Sample_geo_accession | GSM18877
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18877/suppl/GSM18877.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18878 | GPL96 |
|
3AMH02082804_PB_CD4TCells
|
3AMH02082804_PB_CD4TCells
|
3AMH02082804_PB_CD4TCells
|
peripheral blood-CD4TCells
|
| Sample_geo_accession | GSM18878
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18878/suppl/GSM18878.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18879 | GPL96 |
|
3AMH02082805_PB_CD8TCells
|
3AMH02082805_PB_CD8TCells
|
3AMH02082805_PB_CD8TCells
|
peripheral blood-CD8TCells
|
| Sample_geo_accession | GSM18879
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18879/suppl/GSM18879.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18880 | GPL96 |
|
3AMH02082806_PB_CD8TCells
|
3AMH02082806_PB_CD8TCells
|
3AMH02082806_PB_CD8TCells
|
peripheral blood-CD8TCells
|
| Sample_geo_accession | GSM18880
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18880/suppl/GSM18880.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18881 | GPL96 |
|
3AMH02082107_PB_CD19BCells
|
3AMH02082107_PB_CD19BCells
|
3AMH02082107_PB_CD19BCells
|
peripheral blood-CD19BCells
|
| Sample_geo_accession | GSM18881
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18881/suppl/GSM18881.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18882 | GPL96 |
|
3AMH02082108_PB_CD19BCells
|
3AMH02082108_PB_CD19BCells
|
3AMH02082108_PB_CD19BCells
|
peripheral blood-CD19BCells
|
| Sample_geo_accession | GSM18882
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18882/suppl/GSM18882.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18883 | GPL96 |
|
3AMH02082103_BM_CD105Endothelial
|
3AMH02082103_BM_CD105Endothelial
|
3AMH02082103_BM_CD105Endothelial
|
bone marrow-CD105Endothelial
|
| Sample_geo_accession | GSM18883
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18883/suppl/GSM18883.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18884 | GPL96 |
|
3AMH02082104_BM_CD105Endothelial
|
3AMH02082104_BM_CD105Endothelial
|
3AMH02082104_BM_CD105Endothelial
|
bone marrow-CD105Endothelial
|
| Sample_geo_accession | GSM18884
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18884/suppl/GSM18884.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18885 | GPL96 |
|
3AMH02082001_BM_CD34
|
3AMH02082001_BM_CD34
|
3AMH02082001_BM_CD34
|
bone marrow-CD34
|
| Sample_geo_accession | GSM18885
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18885/suppl/GSM18885.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18886 | GPL96 |
|
3AMH02082102_BM_CD34
|
3AMH02082102_BM_CD34
|
3AMH02082102_BM_CD34
|
bone marrow-CD34
|
| Sample_geo_accession | GSM18886
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18886/suppl/GSM18886.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18887 | GPL96 |
|
3AJZ02022218_leukemia lymphoblastic (MOLT-4)
|
3AJZ02022218_leukemia lymphoblastic (MOLT-4)
|
3AJZ02022218_leukemia lymphoblastic (MOLT-4)
|
leukemia lymphoblastic (MOLT-4)
|
| Sample_geo_accession | GSM18887
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18887/suppl/GSM18887.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18888 | GPL96 |
|
3AJZ02022869_leukemia lymphoblastic (MOLT-4)
|
3AJZ02022869_leukemia lymphoblastic (MOLT-4)
|
3AJZ02022869_leukemia lymphoblastic (MOLT-4)
|
leukemia lymphoblastic (MOLT-4)
|
| Sample_geo_accession | GSM18888
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18888/suppl/GSM18888.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18889 | GPL96 |
|
3AMH02082809_721_BLymphoblasts
|
3AMH02082809_721_BLymphoblasts
|
3AMH02082809_721_BLymphoblasts
|
721_BLymphoblasts
|
| Sample_geo_accession | GSM18889
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18889/suppl/GSM18889.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18890 | GPL96 |
|
3AMH02082810_721_BLymphoblasts
|
3AMH02082810_721_BLymphoblasts
|
3AMH02082810_721_BLymphoblasts
|
721_BLymphoblasts
|
| Sample_geo_accession | GSM18890
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18890/suppl/GSM18890.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18891 | GPL96 |
|
3AMH02022603_LymphomaRaji
|
3AMH02022603_LymphomaRaji
|
3AMH02022603_LymphomaRaji
|
LymphomaRaji
|
| Sample_geo_accession | GSM18891
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18891/suppl/GSM18891.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18892 | GPL96 |
|
3AMH02030602_LymphomaRaji
|
3AMH02030602_LymphomaRaji
|
3AMH02030602_LymphomaRaji
|
LymphomaRaji
|
| Sample_geo_accession | GSM18892
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18892/suppl/GSM18892.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18893 | GPL96 |
|
3AJZ02022103_leukemia, promyelocytic-HL-60
|
3AJZ02022103_leukemia, promyelocytic-HL-60
|
3AJZ02022103_leukemia, promyelocytic-HL-60
|
leukemia, promyelocytic-HL-60
|
| Sample_geo_accession | GSM18893
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18893/suppl/GSM18893.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18894 | GPL96 |
|
3AJZ02022220_leukemia, promyelocytic-HL-60
|
3AJZ02022220_leukemia, promyelocytic-HL-60
|
3AJZ02022220_leukemia, promyelocytic-HL-60
|
leukemia, promyelocytic-HL-60
|
| Sample_geo_accession | GSM18894
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18894/suppl/GSM18894.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18895 | GPL96 |
|
3AJZ02031099_ lymphomaburkittsDaudi
|
3AJZ02031099_ lymphomaburkittsDaudi
|
3AJZ02031099_ lymphomaburkittsDaudi
|
lymphomaburkittsDaudi
|
| Sample_geo_accession | GSM18895
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18895/suppl/GSM18895.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18896 | GPL96 |
|
3AJZ02031302_lymphomaburkittsDaudi
|
3AJZ02031302_lymphomaburkittsDaudi
|
3AJZ02031302_lymphomaburkittsDaudi
|
lymphomaburkittsDaudi
|
| Sample_geo_accession | GSM18896
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18896/suppl/GSM18896.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18897 | GPL96 |
|
3AJZ02022105_ leukemia, chronic Myelogenous K-562
|
3AJZ02022105_ leukemia, chronic Myelogenous K-562
|
3AJZ02022105_ leukemia, chronic Myelogenous K-562
|
leukemia, chronic Myelogenous K-562
|
| Sample_geo_accession | GSM18897
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18897/suppl/GSM18897.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18898 | GPL96 |
|
3AJZ02022222_ leukemia, chronic Myelogenous K-562
|
3AJZ02022222_ leukemia, chronic Myelogenous K-562
|
3AJZ02022222_ leukemia, chronic Myelogenous K-562
|
leukemia, chronic Myelogenous K-562
|
| Sample_geo_accession | GSM18898
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18898/suppl/GSM18898.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18899 | GPL96 |
|
3AJZ02022758_thymus
|
3AJZ02022758_thymus
|
3AJZ02022758_thymus
|
thymus
|
| Sample_geo_accession | GSM18899
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18899/suppl/GSM18899.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18900 | GPL96 |
|
3AJZ02031411_thymus
|
3AJZ02031411_thymus
|
3AJZ02031411_thymus
|
thymus
|
| Sample_geo_accession | GSM18900
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18900/suppl/GSM18900.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18901 | GPL96 |
|
3AJZ02051715_Tonsil
|
3AJZ02051715_Tonsil
|
3AJZ02051715_Tonsil
|
Tonsil
|
| Sample_geo_accession | GSM18901
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18901/suppl/GSM18901.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18902 | GPL96 |
|
3AJZ02052116_Tonsil
|
3AJZ02052116_Tonsil
|
3AJZ02052116_Tonsil
|
Tonsil
|
| Sample_geo_accession | GSM18902
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18902/suppl/GSM18902.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18903 | GPL96 |
|
3AJZ02022115_ lymph node
|
3AJZ02022115_ lymph node
|
3AJZ02022115_ lymph node
|
lymph node
|
| Sample_geo_accession | GSM18903
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18903/suppl/GSM18903.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18904 | GPL96 |
|
3AJZ02022232_ lymph node
|
3AJZ02022232_ lymph node
|
3AJZ02022232_ lymph node
|
lymph node
|
| Sample_geo_accession | GSM18904
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18904/suppl/GSM18904.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18905 | GPL96 |
|
3AJZ02022633_fetal liver
|
3AJZ02022633_fetal liver
|
3AJZ02022633_fetal liver
|
fetal liver
|
| Sample_geo_accession | GSM18905
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18905/suppl/GSM18905.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18906 | GPL96 |
|
3AJZ02022750_fetal liver
|
3AJZ02022750_fetal liver
|
3AJZ02022750_fetal liver
|
fetal liver
|
| Sample_geo_accession | GSM18906
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18906/suppl/GSM18906.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18907 | GPL96 |
|
3AMH02082801_BM_CD71EarlyErythroid
|
3AMH02082801_BM_CD71EarlyErythroid
|
3AMH02082801_BM_CD71EarlyErythroid
|
bone marrow-CD71EarlyErythroid
|
| Sample_geo_accession | GSM18907
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18907/suppl/GSM18907.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18908 | GPL96 |
|
3AMH02082802_BM_CD71EarlyErythroid
|
3AMH02082802_BM_CD71EarlyErythroid
|
3AMH02082802_BM_CD71EarlyErythroid
|
bone marrow-CD71EarlyErythroid
|
| Sample_geo_accession | GSM18908
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18908/suppl/GSM18908.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18909 | GPL96 |
|
3AJZ02022865_bone marrow
|
3AJZ02022865_bone marrow
|
3AJZ02022865_bone marrow
|
bone marrow
|
| Sample_geo_accession | GSM18909
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18909/suppl/GSM18909.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18910 | GPL96 |
|
3AJZ02030474_bonemarrow
|
3AJZ02030474_bonemarrow
|
3AJZ02030474_bonemarrow
|
bonemarrow
|
| Sample_geo_accession | GSM18910
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18910/suppl/GSM18910.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18911 | GPL96 |
|
3AJZ02081484a_TemporalLobe
|
3AJZ02081484a_TemporalLobe
|
3AJZ02081484a_TemporalLobe
|
TemporalLobe
|
| Sample_geo_accession | GSM18911
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18911/suppl/GSM18911.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18912 | GPL96 |
|
3AJZ02081484b_TemporalLobe
|
3AJZ02081484b_TemporalLobe
|
3AJZ02081484b_TemporalLobe
|
TemporalLobe
|
| Sample_geo_accession | GSM18912
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18912/suppl/GSM18912.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18913 | GPL96 |
|
3ARS02080774a_globus_pallidus
|
3ARS02080774a_globus_pallidus
|
3ARS02080774a_globus_pallidus
|
globus_pallidus
|
| Sample_geo_accession | GSM18913
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18913/suppl/GSM18913.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18914 | GPL96 |
|
3ARS02080774b_globus_pallidus
|
3ARS02080774b_globus_pallidus
|
3ARS02080774b_globus_pallidus
|
globus_pallidus
|
| Sample_geo_accession | GSM18914
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18914/suppl/GSM18914.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18915 | GPL96 |
|
3AJZ02051604_CerebellumPeduncles
|
3AJZ02051604_CerebellumPeduncles
|
3AJZ02051604_CerebellumPeduncles
|
CerebellumPeduncles
|
| Sample_geo_accession | GSM18915
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18915/suppl/GSM18915.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18916 | GPL96 |
|
3AJZ02061902_CerebellumPeduncles
|
3AJZ02061902_CerebellumPeduncles
|
3AJZ02061902_CerebellumPeduncles
|
CerebellumPeduncles
|
| Sample_geo_accession | GSM18916
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18916/suppl/GSM18916.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18917 | GPL96 |
|
3AJZ02022647_cerebellum
|
3AJZ02022647_cerebellum
|
3AJZ02022647_cerebellum
|
cerebellum
|
| Sample_geo_accession | GSM18917
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18917/suppl/GSM18917.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18918 | GPL96 |
|
3AJZ02022764_cerebellum
|
3AJZ02022764_cerebellum
|
3AJZ02022764_cerebellum
|
cerebellum
|
| Sample_geo_accession | GSM18918
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18918/suppl/GSM18918.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18919 | GPL96 |
|
3AJZ02022226_ brain, caudate nucleus
|
3AJZ02022226_ brain, caudate nucleus
|
3AJZ02022226_ brain, caudate nucleus
|
brain, caudate nucleus
|
| Sample_geo_accession | GSM18919
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18919/suppl/GSM18919.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18920 | GPL96 |
|
3AJZ02022870_ brain, caudate nucleus
|
3AJZ02022870_ brain, caudate nucleus
|
3AJZ02022870_ brain, caudate nucleus
|
brain, caudate nucleus
|
| Sample_geo_accession | GSM18920
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18920/suppl/GSM18920.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18921 | GPL96 |
|
3AMH02030701_Whole Brain
|
3AMH02030701_Whole Brain
|
3AMH02030701_Whole Brain
|
Whole Brain
|
| Sample_geo_accession | GSM18921
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18921/suppl/GSM18921.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18922 | GPL96 |
|
3AJZ02031410_wholebrain
|
3AJZ02031410_wholebrain
|
3AJZ02031410_wholebrain
|
wholebrain
|
| Sample_geo_accession | GSM18922
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18922/suppl/GSM18922.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18923 | GPL96 |
|
3AJZ02051605_ParietalLobe
|
3AJZ02051605_ParietalLobe
|
3AJZ02051605_ParietalLobe
|
ParietalLobe
|
| Sample_geo_accession | GSM18923
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18923/suppl/GSM18923.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18924 | GPL96 |
|
3AJZ02051606_ParietalLobe
|
3AJZ02051606_ParietalLobe
|
3AJZ02051606_ParietalLobe
|
ParietalLobe
|
| Sample_geo_accession | GSM18924
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18924/suppl/GSM18924.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18925 | GPL96 |
|
3AJZ02081479a_Medulla_Oblongata
|
3AJZ02081479a_Medulla_Oblongata
|
3AJZ02081479a_Medulla_Oblongata
|
Medulla_Oblongata
|
| Sample_geo_accession | GSM18925
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18925/suppl/GSM18925.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18926 | GPL96 |
|
3AJZ02081479b_Medulla_Oblongata
|
3AJZ02081479b_Medulla_Oblongata
|
3AJZ02081479b_Medulla_Oblongata
|
Medulla_Oblongata
|
| Sample_geo_accession | GSM18926
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18926/suppl/GSM18926.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18927 | GPL96 |
|
3AMH02022205_Brain Amygdala
|
3AMH02022205_Brain Amygdala
|
3AMH02022205_Brain Amygdala
|
Brain Amygdala
|
| Sample_geo_accession | GSM18927
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18927/suppl/GSM18927.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18928 | GPL96 |
|
3AMH02022605_Brain Amygdala
|
3AMH02022605_Brain Amygdala
|
3AMH02022605_Brain Amygdala
|
Brain Amygdala
|
| Sample_geo_accession | GSM18928
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18928/suppl/GSM18928.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18929 | GPL96 |
|
3AJZ02053109_PrefrontalCortex
|
3AJZ02053109_PrefrontalCortex
|
3AJZ02053109_PrefrontalCortex
|
PrefrontalCortex
|
| Sample_geo_accession | GSM18929
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18929/suppl/GSM18929.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18930 | GPL96 |
|
3AJZ02053111_PrefrontalCortex
|
3AJZ02053111_PrefrontalCortex
|
3AJZ02053111_PrefrontalCortex
|
PrefrontalCortex
|
| Sample_geo_accession | GSM18930
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18930/suppl/GSM18930.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18931 | GPL96 |
|
3AJZ02052306_OccipitalLobe
|
3AJZ02052306_OccipitalLobe
|
3AJZ02052306_OccipitalLobe
|
OccipitalLobe
|
| Sample_geo_accession | GSM18931
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18931/suppl/GSM18931.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18932 | GPL96 |
|
3AJZ02062605_OccipitalLobe
|
3AJZ02062605_OccipitalLobe
|
3AJZ02062605_OccipitalLobe
|
OccipitalLobe
|
| Sample_geo_accession | GSM18932
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18932/suppl/GSM18932.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18933 | GPL96 |
|
3AJZ02060506_Hypothalamus
|
3AJZ02060506_Hypothalamus
|
3AJZ02060506_Hypothalamus
|
Hypothalamus
|
| Sample_geo_accession | GSM18933
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18933/suppl/GSM18933.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18934 | GPL96 |
|
3AJZ02061907_Hypothalamus
|
3AJZ02061907_Hypothalamus
|
3AJZ02061907_Hypothalamus
|
Hypothalamus
|
| Sample_geo_accession | GSM18934
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18934/suppl/GSM18934.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18935 | GPL96 |
|
3AJZ02031306_brainThalamus
|
3AJZ02031306_brainThalamus
|
3AJZ02031306_brainThalamus
|
brainThalamus
|
| Sample_geo_accession | GSM18935
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18935/suppl/GSM18935.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18936 | GPL96 |
|
3AJZ02040819_brainThalamus
|
3AJZ02040819_brainThalamus
|
3AJZ02040819_brainThalamus
|
brainThalamus
|
| Sample_geo_accession | GSM18936
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18936/suppl/GSM18936.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18937 | GPL96 |
|
3ARS02080777a_subthalamic_nucleus
|
3ARS02080777a_subthalamic_nucleus
|
3ARS02080777a_subthalamic_nucleus
|
subthalamic_nucleus
|
| Sample_geo_accession | GSM18937
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18937/suppl/GSM18937.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18938 | GPL96 |
|
3ARS02080777b_subthalamic_nucleus
|
3ARS02080777b_subthalamic_nucleus
|
3ARS02080777b_subthalamic_nucleus
|
subthalamic_nucleus
|
| Sample_geo_accession | GSM18938
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18938/suppl/GSM18938.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18939 | GPL96 |
|
3AJZ02060407_CingulateCortex
|
3AJZ02060407_CingulateCortex
|
3AJZ02060407_CingulateCortex
|
CingulateCortex
|
| Sample_geo_accession | GSM18939
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18939/suppl/GSM18939.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18940 | GPL96 |
|
3AJZ02060508_CingulateCortex
|
3AJZ02060508_CingulateCortex
|
3AJZ02060508_CingulateCortex
|
CingulateCortex
|
| Sample_geo_accession | GSM18940
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18940/suppl/GSM18940.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18941 | GPL96 |
|
3AJZ02081480a_Pons
|
3AJZ02081480a_Pons
|
3AJZ02081480a_Pons
|
Pons
|
| Sample_geo_accession | GSM18941
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18941/suppl/GSM18941.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18942 | GPL96 |
|
3AJZ02081480b_Pons
|
3AJZ02081480b_Pons
|
3AJZ02081480b_Pons
|
Pons
|
| Sample_geo_accession | GSM18942
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18942/suppl/GSM18942.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18943 | GPL96 |
|
3AJZ02022107_ spinal cord
|
3AJZ02022107_ spinal cord
|
3AJZ02022107_ spinal cord
|
spinal cord
|
| Sample_geo_accession | GSM18943
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18943/suppl/GSM18943.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18944 | GPL96 |
|
3AJZ02022224_ spinal cord
|
3AJZ02022224_ spinal cord
|
3AJZ02022224_ spinal cord
|
spinal cord
|
| Sample_geo_accession | GSM18944
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18944/suppl/GSM18944.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18945 | GPL96 |
|
3AJZ02022111_ fetal brain
|
3AJZ02022111_ fetal brain
|
3AJZ02022111_ fetal brain
|
fetal brain
|
| Sample_geo_accession | GSM18945
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18945/suppl/GSM18945.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18946 | GPL96 |
|
3AJZ02022228_ fetal brain
|
3AJZ02022228_ fetal brain
|
3AJZ02022228_ fetal brain
|
fetal brain
|
| Sample_geo_accession | GSM18946
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18946/suppl/GSM18946.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18947 | GPL96 |
|
3AJZ02022645_adrenal gland
|
3AJZ02022645_adrenal gland
|
3AJZ02022645_adrenal gland
|
adrenal gland
|
| Sample_geo_accession | GSM18947
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18947/suppl/GSM18947.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18948 | GPL96 |
|
3AJZ02022762_adrenal gland
|
3AJZ02022762_adrenal gland
|
3AJZ02022762_adrenal gland
|
adrenal gland
|
| Sample_geo_accession | GSM18948
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18948/suppl/GSM18948.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18949 | GPL96 |
|
3AJW02021805_lung
|
3AJW02021805_lung
|
3AJW02021805_lung
|
lung
|
| Sample_geo_accession | GSM18949
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18949/suppl/GSM18949.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18950 | GPL96 |
|
3AMH02030705_Lung
|
3AMH02030705_Lung
|
3AMH02030705_Lung
|
Lung
|
| Sample_geo_accession | GSM18950
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18950/suppl/GSM18950.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18951 | GPL96 |
|
3AJZ02021909_HEART
|
3AJZ02021909_HEART
|
3AJZ02021909_HEART
|
HEART
|
| Sample_geo_accession | GSM18951
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18951/suppl/GSM18951.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18952 | GPL96 |
|
3AMH02030702_Heart
|
3AMH02030702_Heart
|
3AMH02030702_Heart
|
Heart
|
| Sample_geo_accession | GSM18952
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18952/suppl/GSM18952.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18953 | GPL96 |
|
3AJZ02021915_ LIVER
|
3AJZ02021915_ LIVER
|
3AJZ02021915_ LIVER
|
LIVER
|
| Sample_geo_accession | GSM18953
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18953/suppl/GSM18953.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18954 | GPL96 |
|
3AMH02030706_Liver
|
3AMH02030706_Liver
|
3AMH02030706_Liver
|
Liver
|
| Sample_geo_accession | GSM18954
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18954/suppl/GSM18954.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18955 | GPL96 |
|
3AJZ02022643_kidney
|
3AJZ02022643_kidney
|
3AJZ02022643_kidney
|
kidney
|
| Sample_geo_accession | GSM18955
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18955/suppl/GSM18955.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18956 | GPL96 |
|
3AJZ02022760_kidney
|
3AJZ02022760_kidney
|
3AJZ02022760_kidney
|
kidney
|
| Sample_geo_accession | GSM18956
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18956/suppl/GSM18956.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18957 | GPL96 |
|
3AJZ02021911_ PROSTATE
|
3AJZ02021911_ PROSTATE
|
3AJZ02021911_ PROSTATE
|
PROSTATE
|
| Sample_geo_accession | GSM18957
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18957/suppl/GSM18957.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18958 | GPL96 |
|
3AMH02030704_Prostate
|
3AMH02030704_Prostate
|
3AMH02030704_Prostate
|
Prostate
|
| Sample_geo_accession | GSM18958
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18958/suppl/GSM18958.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18959 | GPL96 |
|
3AJZ02021913_ UTERUS
|
3AJZ02021913_ UTERUS
|
3AJZ02021913_ UTERUS
|
UTERUS
|
| Sample_geo_accession | GSM18959
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18959/suppl/GSM18959.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18960 | GPL96 |
|
3AMH02030703_Uterus
|
3AMH02030703_Uterus
|
3AMH02030703_Uterus
|
Uterus
|
| Sample_geo_accession | GSM18960
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18960/suppl/GSM18960.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18961 | GPL96 |
|
3AMH02022204_Thyroid
|
3AMH02022204_Thyroid
|
3AMH02022204_Thyroid
|
Thyroid
|
| Sample_geo_accession | GSM18961
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18961/suppl/GSM18961.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18962 | GPL96 |
|
3AMH02022604_Thyroid
|
3AMH02022604_Thyroid
|
3AMH02022604_Thyroid
|
Thyroid
|
| Sample_geo_accession | GSM18962
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18962/suppl/GSM18962.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18963 | GPL96 |
|
3AJZ02052217_fetalThyroid
|
3AJZ02052217_fetalThyroid
|
3AJZ02052217_fetalThyroid
|
fetalThyroid
|
| Sample_geo_accession | GSM18963
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18963/suppl/GSM18963.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18964 | GPL96 |
|
3AJZ02052323_FETALTHYROID
|
3AJZ02052323_FETALTHYROID
|
3AJZ02052323_FETALTHYROID
|
FETALTHYROID
|
| Sample_geo_accession | GSM18964
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18964/suppl/GSM18964.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18965 | GPL96 |
|
3AJZ02022872_ fetal lung
|
3AJZ02022872_ fetal lung
|
3AJZ02022872_ fetal lung
|
fetal lung
|
| Sample_geo_accession | GSM18965
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18965/suppl/GSM18965.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18966 | GPL96 |
|
3AJZ02031304_fetallung
|
3AJZ02031304_fetallung
|
3AJZ02031304_fetallung
|
fetallung
|
| Sample_geo_accession | GSM18966
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18966/suppl/GSM18966.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18967 | GPL96 |
|
3ARS0207253IA_PLACENTA
|
3ARS0207253IA_PLACENTA
|
3ARS0207253IA_PLACENTA
|
PLACENTA
|
| Sample_geo_accession | GSM18967
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18967/suppl/GSM18967.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18968 | GPL96 |
|
3ARS0207263HB_PLACENTA
|
3ARS0207263HB_PLACENTA
|
3ARS0207263HB_PLACENTA
|
PLACENTA
|
| Sample_geo_accession | GSM18968
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18968/suppl/GSM18968.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18969 | GPL96 |
|
3AJZ02053107_CardiacMyocytes
|
3AJZ02053107_CardiacMyocytes
|
3AJZ02053107_CardiacMyocytes
|
CardiacMyocytes
|
| Sample_geo_accession | GSM18969
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18969/suppl/GSM18969.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18970 | GPL96 |
|
3AJZ02060604_CardiacMyocytes
|
3AJZ02060604_CardiacMyocytes
|
3AJZ02060604_CardiacMyocytes
|
CardiacMyocytes
|
| Sample_geo_accession | GSM18970
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18970/suppl/GSM18970.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18971 | GPL96 |
|
3AJZ02053105_SmoothMuscle
|
3AJZ02053105_SmoothMuscle
|
3AJZ02053105_SmoothMuscle
|
SmoothMuscle
|
| Sample_geo_accession | GSM18971
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18971/suppl/GSM18971.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18972 | GPL96 |
|
3AJZ02060603_SmoothMuscle
|
3AJZ02060603_SmoothMuscle
|
3AJZ02060603_SmoothMuscle
|
SmoothMuscle
|
| Sample_geo_accession | GSM18972
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18972/suppl/GSM18972.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18973 | GPL96 |
|
3AJZ02053101_HBEC
|
3AJZ02053101_HBEC
|
3AJZ02053101_HBEC
|
HBEC
|
| Sample_geo_accession | GSM18973
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18973/suppl/GSM18973.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18974 | GPL96 |
|
3AJZ02053103_HBEC
|
3AJZ02053103_HBEC
|
3AJZ02053103_HBEC
|
HBEC
|
| Sample_geo_accession | GSM18974
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18974/suppl/GSM18974.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18975 | GPL96 |
|
3AJZ02052312_HUMANCULTUREDADIPOCYTE
|
3AJZ02052312_HUMANCULTUREDADIPOCYTE
|
3AJZ02052312_HUMANCULTUREDADIPOCYTE
|
HUMANCULTUREDADIPOCYTE
|
| Sample_geo_accession | GSM18975
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18975/suppl/GSM18975.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18976 | GPL96 |
|
3AJZ02072570_HUMANCULTUREDADIPOCYTE
|
3AJZ02072570_HUMANCULTUREDADIPOCYTE
|
3AJZ02072570_HUMANCULTUREDADIPOCYTE
|
HUMANCULTUREDADIPOCYTE
|
| Sample_geo_accession | GSM18976
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18976/suppl/GSM18976.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18977 | GPL96 |
|
3AJZ02060401_Pancreas
|
3AJZ02060401_Pancreas
|
3AJZ02060401_Pancreas
|
Pancreas
|
| Sample_geo_accession | GSM18977
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18977/suppl/GSM18977.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18978 | GPL96 |
|
3AJZ02060502_Pancreas
|
3AJZ02060502_Pancreas
|
3AJZ02060502_Pancreas
|
Pancreas
|
| Sample_geo_accession | GSM18978
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18978/suppl/GSM18978.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18979 | GPL96 |
|
3AJZ02052309_Islet
|
3AJZ02052309_Islet
|
3AJZ02052309_Islet
|
Islet
|
| Sample_geo_accession | GSM18979
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18979/suppl/GSM18979.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18980 | GPL96 |
|
3AJZ02060417_IsletCell
|
3AJZ02060417_IsletCell
|
3AJZ02060417_IsletCell
|
IsletCell
|
| Sample_geo_accession | GSM18980
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18980/suppl/GSM18980.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18981 | GPL96 |
|
3AJZ02022635_testis
|
3AJZ02022635_testis
|
3AJZ02022635_testis
|
testis
|
| Sample_geo_accession | GSM18981
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Apr 16 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18981/suppl/GSM18981.CEL.gz
| | Sample_relation | Reanalyzed by: GSM915802
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18982 | GPL96 |
|
3AJZ02022752_testis
|
3AJZ02022752_testis
|
3AJZ02022752_testis
|
testis
|
| Sample_geo_accession | GSM18982
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Apr 16 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18982/suppl/GSM18982.CEL.gz
| | Sample_relation | Reanalyzed by: GSM915803
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18983 | GPL96 |
|
3AJZ02051711_Testi_LeydigCell
|
3AJZ02051711_Testi_LeydigCell
|
3AJZ02051711_Testi_LeydigCell
|
Testi_LeydigCell
|
| Sample_geo_accession | GSM18983
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18983/suppl/GSM18983.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18984 | GPL96 |
|
3AJZ02052112_TestiLeydigCell
|
3AJZ02052112_TestiLeydigCell
|
3AJZ02052112_TestiLeydigCell
|
TestiLeydigCell
|
| Sample_geo_accession | GSM18984
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18984/suppl/GSM18984.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18985 | GPL96 |
|
3AJZ02051707_Testi_GermCell
|
3AJZ02051707_Testi_GermCell
|
3AJZ02051707_Testi_GermCell
|
Testi_GermCell
|
| Sample_geo_accession | GSM18985
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18985/suppl/GSM18985.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18986 | GPL96 |
|
3AJZ02052108_Testi-GermCell
|
3AJZ02052108_Testi-GermCell
|
3AJZ02052108_Testi-GermCell
|
Testi-GermCell
|
| Sample_geo_accession | GSM18986
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18986/suppl/GSM18986.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18987 | GPL96 |
|
3AJZ02051709_Testi_Intersitial
|
3AJZ02051709_Testi_Intersitial
|
3AJZ02051709_Testi_Intersitial
|
Testi_Intersitial
|
| Sample_geo_accession | GSM18987
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18987/suppl/GSM18987.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18988 | GPL96 |
|
3AJZ02052305_TestiIntersitial
|
3AJZ02052305_TestiIntersitial
|
3AJZ02052305_TestiIntersitial
|
TestiIntersitial
|
| Sample_geo_accession | GSM18988
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18988/suppl/GSM18988.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18989 | GPL96 |
|
3AJZ02051713_Testi_SeminiferousTubule
|
3AJZ02051713_Testi_SeminiferousTubule
|
3AJZ02051713_Testi_SeminiferousTubule
|
Testi_SeminiferousTubule
|
| Sample_geo_accession | GSM18989
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18989/suppl/GSM18989.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18990 | GPL96 |
|
3AJZ02052114_TestiSeminiferousTubule
|
3AJZ02052114_TestiSeminiferousTubule
|
3AJZ02052114_TestiSeminiferousTubule
|
TestiSeminiferousTubule
|
| Sample_geo_accession | GSM18990
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18990/suppl/GSM18990.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18991 | GPL96 |
|
3AJZ02040823_salivarygland
|
3AJZ02040823_salivarygland
|
3AJZ02040823_salivarygland
|
salivarygland
|
| Sample_geo_accession | GSM18991
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18991/suppl/GSM18991.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18992 | GPL96 |
|
3AJZ02041226_salivarygland
|
3AJZ02041226_salivarygland
|
3AJZ02041226_salivarygland
|
salivarygland
|
| Sample_geo_accession | GSM18992
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18992/suppl/GSM18992.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18993 | GPL96 |
|
3AJZ02022639_trachea
|
3AJZ02022639_trachea
|
3AJZ02022639_trachea
|
trachea
|
| Sample_geo_accession | GSM18993
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18993/suppl/GSM18993.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18994 | GPL96 |
|
3AJZ02022756_trachea
|
3AJZ02022756_trachea
|
3AJZ02022756_trachea
|
trachea
|
| Sample_geo_accession | GSM18994
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18994/suppl/GSM18994.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18995 | GPL96 |
|
3AJZ02050802_AdrenalCortex
|
3AJZ02050802_AdrenalCortex
|
3AJZ02050802_AdrenalCortex
|
AdrenalCortex
|
| Sample_geo_accession | GSM18995
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18995/suppl/GSM18995.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18996 | GPL96 |
|
3AJZ02051002_AdrenalCortex
|
3AJZ02051002_AdrenalCortex
|
3AJZ02051002_AdrenalCortex
|
AdrenalCortex
|
| Sample_geo_accession | GSM18996
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18996/suppl/GSM18996.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18997 | GPL96 |
|
3AJZ02050806_Ovary
|
3AJZ02050806_Ovary
|
3AJZ02050806_Ovary
|
Ovary
|
| Sample_geo_accession | GSM18997
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18997/suppl/GSM18997.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18998 | GPL96 |
|
3AJZ02052302_Ovary
|
3AJZ02052302_Ovary
|
3AJZ02052302_Ovary
|
Ovary
|
| Sample_geo_accession | GSM18998
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18998/suppl/GSM18998.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM18999 | GPL96 |
|
3AJZ02081482a_Appendix
|
3AJZ02081482a_Appendix
|
3AJZ02081482a_Appendix
|
Appendix
|
| Sample_geo_accession | GSM18999
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM18nnn/GSM18999/suppl/GSM18999.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19000 | GPL96 |
|
3AJZ02081482b_Appendix
|
3AJZ02081482b_Appendix
|
3AJZ02081482b_Appendix
|
Appendix
|
| Sample_geo_accession | GSM19000
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19000/suppl/GSM19000.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19001 | GPL96 |
|
3ARS02080776a_skin
|
3ARS02080776a_skin
|
3ARS02080776a_skin
|
skin
|
| Sample_geo_accession | GSM19001
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19001/suppl/GSM19001.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19002 | GPL96 |
|
3ARS02080776b_skin
|
3ARS02080776b_skin
|
3ARS02080776b_skin
|
skin
|
| Sample_geo_accession | GSM19002
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19002/suppl/GSM19002.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19003 | GPL96 |
|
3ARS02080773a_ciliary_ganglion
|
3ARS02080773a_ciliary_ganglion
|
3ARS02080773a_ciliary_ganglion
|
ciliary_ganglion
|
| Sample_geo_accession | GSM19003
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19003/suppl/GSM19003.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19004 | GPL96 |
|
3ARS02080773b_ciliary_ganglion
|
3ARS02080773b_ciliary_ganglion
|
3ARS02080773b_ciliary_ganglion
|
ciliary_ganglion
|
| Sample_geo_accession | GSM19004
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19004/suppl/GSM19004.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19005 | GPL96 |
|
3AJZ02081483a_Trigeminal_Ganglion
|
3AJZ02081483a_Trigeminal_Ganglion
|
3AJZ02081483a_Trigeminal_Ganglion
|
Trigeminal_Ganglion
|
| Sample_geo_accession | GSM19005
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19005/suppl/GSM19005.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19006 | GPL96 |
|
3AJZ02081483b_Trigeminal_Ganglion
|
3AJZ02081483b_Trigeminal_Ganglion
|
3AJZ02081483b_Trigeminal_Ganglion
|
Trigeminal_Ganglion
|
| Sample_geo_accession | GSM19006
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19006/suppl/GSM19006.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19007 | GPL96 |
|
3ARS02080772a_atrioventricular_node
|
3ARS02080772a_atrioventricular_node
|
3ARS02080772a_atrioventricular_node
|
atrioventricular_node
|
| Sample_geo_accession | GSM19007
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19007/suppl/GSM19007.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19008 | GPL96 |
|
3ARS02080772b_atrioventricular_node
|
3ARS02080772b_atrioventricular_node
|
3ARS02080772b_atrioventricular_node
|
atrioventricular_node
|
| Sample_geo_accession | GSM19008
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19008/suppl/GSM19008.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19009 | GPL96 |
|
3ARS02080736e_DRG
|
3ARS02080736e_DRG
|
3ARS02080736e_DRG
|
DRG
|
| Sample_geo_accession | GSM19009
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19009/suppl/GSM19009.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19010 | GPL96 |
|
3ARS02080736f_DRG
|
3ARS02080736f_DRG
|
3ARS02080736f_DRG
|
DRG
|
| Sample_geo_accession | GSM19010
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19010/suppl/GSM19010.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19011 | GPL96 |
|
3AJZ02081478a_Superior_Cervical_Ganglion
|
3AJZ02081478a_Superior_Cervical_Ganglion
|
3AJZ02081478a_Superior_Cervical_Ganglion
|
Superior_Cervical_Ganglion
|
| Sample_geo_accession | GSM19011
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19011/suppl/GSM19011.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19012 | GPL96 |
|
3AJZ02081478b_Superior_Cervical_Ganglion
|
3AJZ02081478b_Superior_Cervical_Ganglion
|
3AJZ02081478b_Superior_Cervical_Ganglion
|
Superior_Cervical_Ganglion
|
| Sample_geo_accession | GSM19012
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19012/suppl/GSM19012.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19013 | GPL96 |
|
3AJZ02083092a_Skeletal_Muscle_Psoas
|
3AJZ02083092a_Skeletal_Muscle_Psoas
|
3AJZ02083092a_Skeletal_Muscle_Psoas
|
Skeletal_Muscle_Psoas
|
| Sample_geo_accession | GSM19013
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19013/suppl/GSM19013.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19014 | GPL96 |
|
3AJZ02083092b_Skeletal_Muscle_Psoas
|
3AJZ02083092b_Skeletal_Muscle_Psoas
|
3AJZ02083092b_Skeletal_Muscle_Psoas
|
Skeletal_Muscle_Psoas
|
| Sample_geo_accession | GSM19014
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19014/suppl/GSM19014.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19015 | GPL96 |
|
3AJZ02083089a_Uterus_Corpus
|
3AJZ02083089a_Uterus_Corpus
|
3AJZ02083089a_Uterus_Corpus
|
Uterus_Corpus
|
| Sample_geo_accession | GSM19015
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19015/suppl/GSM19015.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19016 | GPL96 |
|
3AJZ02083089b_Uterus_Corpus
|
3AJZ02083089b_Uterus_Corpus
|
3AJZ02083089b_Uterus_Corpus
|
Uterus_Corpus
|
| Sample_geo_accession | GSM19016
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19016/suppl/GSM19016.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19017 | GPL96 |
|
3AJZ02082987A_TONGUE
|
3AJZ02082987A_TONGUE
|
3AJZ02082987A_TONGUE
|
TONGUE
|
| Sample_geo_accession | GSM19017
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19017/suppl/GSM19017.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19018 | GPL96 |
|
3AJZ02082987B_TONGUE
|
3AJZ02082987B_TONGUE
|
3AJZ02082987B_TONGUE
|
TONGUE
|
| Sample_geo_accession | GSM19018
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19018/suppl/GSM19018.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19019 | GPL96 |
|
3AJZ02060514_OlfactoryBulb
|
3AJZ02060514_OlfactoryBulb
|
3AJZ02060514_OlfactoryBulb
|
OlfactoryBulb
|
| Sample_geo_accession | GSM19019
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19019/suppl/GSM19019.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19020 | GPL96 |
|
3AJZ02072561_OlfactoryBulb
|
3AJZ02072561_OlfactoryBulb
|
3AJZ02072561_OlfactoryBulb
|
OlfactoryBulb
|
| Sample_geo_accession | GSM19020
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19020/suppl/GSM19020.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19021 | GPL96 |
|
3AJZ02022867_Pituitary
|
3AJZ02022867_Pituitary
|
3AJZ02022867_Pituitary
|
Pituitary
|
| Sample_geo_accession | GSM19021
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19021/suppl/GSM19021.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
|
GSM19022 | GPL96 |
|
3AJZ02030476_pituitary
|
3AJZ02030476_pituitary
|
3AJZ02030476_pituitary
|
pituitary
|
| Sample_geo_accession | GSM19022
| | Sample_status | Public on Mar 19 2004
| | Sample_submission_date | Mar 18 2004
| | Sample_last_update_date | Sep 25 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Human tissue samples were obtained from several sources: Clinomics Biosciences (Pittsfield, MA), Clontech, AllCells (Berkeley, CA), Clonetics/BioWhittaker (Walk-ersville, MD), AMS Biotechnology (Abingdon, Oxfordshire, U.K.), and the University of California at San Diego. When samples from four or more subjects were available, equal numbers of male and female subjects were used to make two independent pools; when fewer than four samples were available, RNA samples were pooled, and duplicate amplifications were performed for each pool (detailed annotation for human samples is on our web site, http:\\symatlas.gnf.org) Extracted RNA was additionally purified on RNeasy mini columns (Qiagen). RNA quantity and quality was verified on Bioanalyser 2100 (Agilent).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Five micrograms of total RNA was used to synthesize cDNA that was then used as a template to generate biotinylated cRNA using Enzo kits.
| | Sample_hyb_protocol | standard Affymetrix procedures except for use of a custom 24-channel fluidics machine and GCS2500 scanner
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM19nnn/GSM19022/suppl/GSM19022.CEL.gz
| | Sample_series_id | GSE1133
| | Sample_data_row_count | 22283
| | |
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