Search results for the GEO ID: GSE11357 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM287224 | GPL1261 |
|
Irradiated IR1
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
IR1, SCCVII cell line derived from tumors grown in pre-irradiated stroma, sample 1
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287224
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287224/suppl/GSM287224.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287225 | GPL1261 |
|
Irradiated IR2
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
IR2, SCCVII cell line derived from tumors grown in pre-irradiated stroma, sample 2
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287225
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287225/suppl/GSM287225.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287226 | GPL1261 |
|
Irradiated IR3
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
IR3, SCCVII cell line derived from tumors grown in pre-irradiated stroma, sample 3
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287226
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287226/suppl/GSM287226.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287227 | GPL1261 |
|
Non-irradiated NIR1
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
NIR1, SCCVII cell line derived from tumors grown in non-irradiated stroma, sample 1
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287227
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287227/suppl/GSM287227.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287228 | GPL1261 |
|
Non-irradiated NIR2
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
NIR2, SCCVII cell line derived from tumors grown in non-irradiated stroma, sample 2
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287228
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287228/suppl/GSM287228.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287229 | GPL1261 |
|
Non-irradiated NIR3
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
NIR3, SCCVII cell line derived from tumors grown in non-irradiated stroma, sample 3
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287229
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287229/suppl/GSM287229.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287230 | GPL1261 |
|
Parental PA1
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
PA1, parental SCCVII, sample 1
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287230
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287230/suppl/GSM287230.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287231 | GPL1261 |
|
Parental PA2
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
PA2, parental SCCVII, sample 2
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287231
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287231/suppl/GSM287231.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
|
GSM287232 | GPL1261 |
|
Parental PA3
|
SCCVII (Tumor cell lines derived from a spontaneously arisen oral squamous cell carcinoma in CH3 mice)
|
PA3, parental SCCVII, sample 3
|
PA, SCCVII cells maintained in culture under standard conditions (37C, 5%C02) NIR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in non-irradiated stroma. The tumors are poorly invasive and metastatic, and the derived NIR liens are also poorly invasive and metastatic. IR, SCCVII cell line derived from tumors formed by PA SCCVII cells injected in pre-irradiated stroma. These tumors are highly hypoxic, invasive and metastatic, and the derived IR lines retain invasive and metastatic capacities even when cultured and expanded under normoxic conditions in vitro.
|
Sample_geo_accession | GSM287232
| Sample_status | Public on Apr 30 2009
| Sample_submission_date | May 07 2008
| Sample_last_update_date | Apr 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNeasy Mini Kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix procedure
| Sample_hyb_protocol | Standard Affymetrix procedure
| Sample_scan_protocol | Standard Affymetrix procedure
| Sample_data_processing | RMA
| Sample_platform_id | GPL1261
| Sample_contact_name | Mauro ,,Delorenzi
| Sample_contact_email | Mauro.Delorenzi@unil.ch
| Sample_contact_institute | ISREC
| Sample_contact_address | 155 Boveresses
| Sample_contact_city | Lausanne
| Sample_contact_zip/postal_code | 1066
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287232/suppl/GSM287232.CEL.gz
| Sample_series_id | GSE11357
| Sample_data_row_count | 45100
| |
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