Search results for the GEO ID: GSE11367  |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM287216 | GPL570 |
|
Donor A Untreated VSMCs
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Untreated VSMCs
|
Control
Donor A
|
Human Aortic Vascular Smooth Muscle Cells
|
| Sample_geo_accession | GSM287216
| | Sample_status | Public on Jun 28 2008
| | Sample_submission_date | May 06 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | VSMCs from the human aortas were cultured in M199 media supplemented with 20% FCS and used at passage 3. The cells were either not treated or treated with IL-17 at 100 ng/ml for 6 hr.
| | Sample_growth_protocol_ch1 | VSMCs were cultured in M199 media supplemented with 20% FCS, glutamine and Penicillin/Streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified from vascular smooth muscle cells using Qiagen RNEasy Micro columns and protocol provided by supplier.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Purified RNA was converted to biotinylated cDNA target.
| | Sample_hyb_protocol | Following fragmentation, cDNA was hybridized for 16 hr at 45C on GeneChip Human U133plus2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 and expression console (Affymetrix).
| | Sample_data_processing | GeneSpring GX 7.3 data analysis software (Silicon Genetics, Redwood, CA) with RMA (Robust Multi-Array Average) were used for normalization and fold-change calculations
| | Sample_data_processing |
| | Sample_data_processing | RMA data was requested from submitter but was not provided
| | Sample_platform_id | GPL570
| | Sample_contact_name | Raymond,Emile,Eid
| | Sample_contact_email | raymond.eid@yale.edu
| | Sample_contact_phone | 203-7372289
| | Sample_contact_department | Surgery
| | Sample_contact_institute | Yale University
| | Sample_contact_address | 10 Amistad Street
| | Sample_contact_city | New Haven
| | Sample_contact_state | CT
| | Sample_contact_zip/postal_code | 06510
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287216/suppl/GSM287216.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287216/suppl/GSM287216.CHP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11367
| | Sample_data_row_count | 54675
| | |
|
GSM287217 | GPL570 |
|
Donor A IL-17-treated VSMCs
|
IL17-treated VSMCs
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IL-17 treated
Donor A
|
Human Aortic Vascular Smooth Muscle Cells
|
| Sample_geo_accession | GSM287217
| | Sample_status | Public on Jun 28 2008
| | Sample_submission_date | May 06 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | VSMCs from the human aortas were cultured in M199 media supplemented with 20% FCS and used at passage 3. The cells were either not treated or treated with IL-17 at 100 ng/ml for 6 hr.
| | Sample_growth_protocol_ch1 | VSMCs were cultured in M199 media supplemented with 20% FCS, glutamine and Penicillin/Streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified from vascular smooth muscle cells using Qiagen RNEasy Micro columns and protocol provided by supplier.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Purified RNA was converted to biotinylated cDNA target.
| | Sample_hyb_protocol | Following fragmentation, cDNA was hybridized for 16 hr at 45C on GeneChip Human U133plus2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 and expression console (Affymetrix).
| | Sample_data_processing | GeneSpring GX 7.3 data analysis software (Silicon Genetics, Redwood, CA) with RMA (Robust Multi-Array Average) were used for normalization and fold-change calculations
| | Sample_data_processing |
| | Sample_data_processing | RMA data was requested from submitter but was not provided
| | Sample_platform_id | GPL570
| | Sample_contact_name | Raymond,Emile,Eid
| | Sample_contact_email | raymond.eid@yale.edu
| | Sample_contact_phone | 203-7372289
| | Sample_contact_department | Surgery
| | Sample_contact_institute | Yale University
| | Sample_contact_address | 10 Amistad Street
| | Sample_contact_city | New Haven
| | Sample_contact_state | CT
| | Sample_contact_zip/postal_code | 06510
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287217/suppl/GSM287217.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287217/suppl/GSM287217.CHP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11367
| | Sample_data_row_count | 54675
| | |
|
GSM287218 | GPL570 |
|
Donor B Untreated VSMCs
|
Untreated VSMCs
|
Control
Donor B
|
Human Aortic Vascular Smooth Muscle Cells
|
| Sample_geo_accession | GSM287218
| | Sample_status | Public on Jun 28 2008
| | Sample_submission_date | May 06 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | VSMCs from the human aortas were cultured in M199 media supplemented with 20% FCS and used at passage 3. The cells were either not treated or treated with IL-17 at 100 ng/ml for 6 hr.
| | Sample_growth_protocol_ch1 | VSMCs were cultured in M199 media supplemented with 20% FCS, glutamine and Penicillin/Streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified from vascular smooth muscle cells using Qiagen RNEasy Micro columns and protocol provided by supplier.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Purified RNA was converted to biotinylated cDNA target.
| | Sample_hyb_protocol | Following fragmentation, cDNA was hybridized for 16 hr at 45C on GeneChip Human U133plus2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 and expression console (Affymetrix).
| | Sample_data_processing | GeneSpring GX 7.3 data analysis software (Silicon Genetics, Redwood, CA) with RMA (Robust Multi-Array Average) were used for normalization and fold-change calculations
| | Sample_data_processing |
| | Sample_data_processing | RMA data was requested from submitter but was not provided
| | Sample_platform_id | GPL570
| | Sample_contact_name | Raymond,Emile,Eid
| | Sample_contact_email | raymond.eid@yale.edu
| | Sample_contact_phone | 203-7372289
| | Sample_contact_department | Surgery
| | Sample_contact_institute | Yale University
| | Sample_contact_address | 10 Amistad Street
| | Sample_contact_city | New Haven
| | Sample_contact_state | CT
| | Sample_contact_zip/postal_code | 06510
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287218/suppl/GSM287218.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287218/suppl/GSM287218.CHP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11367
| | Sample_data_row_count | 54675
| | |
|
GSM287219 | GPL570 |
|
Donor B IL-17-treated VSMCs
|
IL17-treated VSMCs
|
IL-17 treated
Donor B
|
Human Aortic Vascular Smooth Muscle Cells
|
| Sample_geo_accession | GSM287219
| | Sample_status | Public on Jun 28 2008
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | VSMCs from the human aortas were cultured in M199 media supplemented with 20% FCS and used at passage 3. The cells were either not treated or treated with IL-17 at 100 ng/ml for 6 hr.
| | Sample_growth_protocol_ch1 | VSMCs were cultured in M199 media supplemented with 20% FCS, glutamine and Penicillin/Streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified from vascular smooth muscle cells using Qiagen RNEasy Micro columns and protocol provided by supplier.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Purified RNA was converted to biotinylated cDNA target.
| | Sample_hyb_protocol | Following fragmentation, cDNA was hybridized for 16 hr at 45C on GeneChip Human U133plus2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 and expression console (Affymetrix).
| | Sample_data_processing | GeneSpring GX 7.3 data analysis software (Silicon Genetics, Redwood, CA) with RMA (Robust Multi-Array Average) were used for normalization and fold-change calculations
| | Sample_data_processing |
| | Sample_data_processing | RMA data was requested from submitter but was not provided
| | Sample_platform_id | GPL570
| | Sample_contact_name | Raymond,Emile,Eid
| | Sample_contact_email | raymond.eid@yale.edu
| | Sample_contact_phone | 203-7372289
| | Sample_contact_department | Surgery
| | Sample_contact_institute | Yale University
| | Sample_contact_address | 10 Amistad Street
| | Sample_contact_city | New Haven
| | Sample_contact_state | CT
| | Sample_contact_zip/postal_code | 06510
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287219/suppl/GSM287219.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287219/suppl/GSM287219.CHP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11367
| | Sample_data_row_count | 54675
| | |
|
GSM287220 | GPL570 |
|
Donor C Untreated VSMCs
|
Untreated VSMCs
|
Control
Donor C
|
Human Aortic Vascular Smooth Muscle Cells
|
| Sample_geo_accession | GSM287220
| | Sample_status | Public on Jun 28 2008
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | VSMCs from the human aortas were cultured in M199 media supplemented with 20% FCS and used at passage 3. The cells were either not treated or treated with IL-17 at 100 ng/ml for 6 hr.
| | Sample_growth_protocol_ch1 | VSMCs were cultured in M199 media supplemented with 20% FCS, glutamine and Penicillin/Streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified from vascular smooth muscle cells using Qiagen RNEasy Micro columns and protocol provided by supplier.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Purified RNA was converted to biotinylated cDNA target.
| | Sample_hyb_protocol | Following fragmentation, cDNA was hybridized for 16 hr at 45C on GeneChip Human U133plus2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 and expression console (Affymetrix).
| | Sample_data_processing | GeneSpring GX 7.3 data analysis software (Silicon Genetics, Redwood, CA) with RMA (Robust Multi-Array Average) were used for normalization and fold-change calculations
| | Sample_data_processing |
| | Sample_data_processing | RMA data was requested from submitter but was not provided
| | Sample_platform_id | GPL570
| | Sample_contact_name | Raymond,Emile,Eid
| | Sample_contact_email | raymond.eid@yale.edu
| | Sample_contact_phone | 203-7372289
| | Sample_contact_department | Surgery
| | Sample_contact_institute | Yale University
| | Sample_contact_address | 10 Amistad Street
| | Sample_contact_city | New Haven
| | Sample_contact_state | CT
| | Sample_contact_zip/postal_code | 06510
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287220/suppl/GSM287220.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287220/suppl/GSM287220.CHP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11367
| | Sample_data_row_count | 54675
| | |
|
GSM287222 | GPL570 |
|
Donor C IL-17-treated VSMCs
|
IL17-treated VSMCs
|
IL-17 treated
Donor C
|
Human Aortic Vascular Smooth Muscle Cells
|
| Sample_geo_accession | GSM287222
| | Sample_status | Public on Jun 28 2008
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | VSMCs from the human aortas were cultured in M199 media supplemented with 20% FCS and used at passage 3. The cells were either not treated or treated with IL-17 at 100 ng/ml for 6 hr.
| | Sample_growth_protocol_ch1 | VSMCs were cultured in M199 media supplemented with 20% FCS, glutamine and Penicillin/Streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified from vascular smooth muscle cells using Qiagen RNEasy Micro columns and protocol provided by supplier.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Purified RNA was converted to biotinylated cDNA target.
| | Sample_hyb_protocol | Following fragmentation, cDNA was hybridized for 16 hr at 45C on GeneChip Human U133plus2.0 Arrays.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 and expression console (Affymetrix).
| | Sample_data_processing | GeneSpring GX 7.3 data analysis software (Silicon Genetics, Redwood, CA) with RMA (Robust Multi-Array Average) were used for normalization and fold-change calculations
| | Sample_data_processing |
| | Sample_data_processing | RMA data was requested from submitter but was not provided
| | Sample_platform_id | GPL570
| | Sample_contact_name | Raymond,Emile,Eid
| | Sample_contact_email | raymond.eid@yale.edu
| | Sample_contact_phone | 203-7372289
| | Sample_contact_department | Surgery
| | Sample_contact_institute | Yale University
| | Sample_contact_address | 10 Amistad Street
| | Sample_contact_city | New Haven
| | Sample_contact_state | CT
| | Sample_contact_zip/postal_code | 06510
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287222/suppl/GSM287222.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287222/suppl/GSM287222.CHP.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE11367
| | Sample_data_row_count | 54675
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