Search results for the GEO ID: GSE11375  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM287288 | GPL570 |
|
group-1-ctl-c10052302
|
blood
|
age: 20
gender: male
final disposition: control
|
group-1-ctl-c10052302
|
| Sample_geo_accession | GSM287288
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287288/suppl/GSM287288.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287289 | GPL570 |
|
group-1-ctl-c19130256
|
blood
|
age: 34
gender: female
final disposition: control
|
group-1-ctl-c19130256
|
| Sample_geo_accession | GSM287289
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287289/suppl/GSM287289.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287290 | GPL570 |
|
group-1-ctl-c2018336
|
blood
|
age: 40
gender: female
final disposition: control
|
group-1-ctl-c2018336
|
| Sample_geo_accession | GSM287290
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287290/suppl/GSM287290.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287291 | GPL570 |
|
group-1-ctl-c25216385
|
blood
|
age: 31
gender: male
final disposition: control
|
group-1-ctl-c25216385
|
| Sample_geo_accession | GSM287291
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287291/suppl/GSM287291.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287292 | GPL570 |
|
group-1-ctl-c25419898
|
blood
|
age: 21
gender: female
final disposition: control
|
group-1-ctl-c25419898
|
| Sample_geo_accession | GSM287292
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287292/suppl/GSM287292.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287293 | GPL570 |
|
group-1-ctl-c26096349
|
blood
|
age: 43
gender: male
final disposition: control
|
group-1-ctl-c26096349
|
| Sample_geo_accession | GSM287293
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287293/suppl/GSM287293.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287294 | GPL570 |
|
group-1-ctl-c30463616
|
blood
|
age: 18
gender: female
final disposition: control
|
group-1-ctl-c30463616
|
| Sample_geo_accession | GSM287294
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287294/suppl/GSM287294.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287295 | GPL570 |
|
group-1-ctl-c34578412
|
blood
|
age: 26
gender: male
final disposition: control
|
group-1-ctl-c34578412
|
| Sample_geo_accession | GSM287295
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287295/suppl/GSM287295.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287296 | GPL570 |
|
group-1-ctl-c5367069
|
blood
|
age: 29
gender: female
final disposition: 88: Other (specify)
|
group-1-ctl-c5367069
|
| Sample_geo_accession | GSM287296
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287296/suppl/GSM287296.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287297 | GPL570 |
|
group-1-ctl-c7760396
|
blood
|
age: 31
gender: male
final disposition: 06: Home
|
group-1-ctl-c7760396
|
| Sample_geo_accession | GSM287297
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287297/suppl/GSM287297.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287298 | GPL570 |
|
group-1-pt-t10999876
|
blood
|
age: 50
gender: male
final disposition: 09: Death
|
group-1-pt-t10999876
|
| Sample_geo_accession | GSM287298
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287298/suppl/GSM287298.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902052
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287299 | GPL570 |
|
group-1-pt-t11706353
|
blood
|
age: 21
gender: male
final disposition: 06: Home
|
group-1-pt-t11706353
|
| Sample_geo_accession | GSM287299
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287299/suppl/GSM287299.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902146
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287300 | GPL570 |
|
group-1-pt-t12460746
|
blood
|
age: 34
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t12460746
|
| Sample_geo_accession | GSM287300
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287300/suppl/GSM287300.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901621
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287301 | GPL570 |
|
group-1-pt-t12718421
|
blood
|
age: 33
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t12718421
|
| Sample_geo_accession | GSM287301
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287301/suppl/GSM287301.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901616
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287302 | GPL570 |
|
group-1-pt-t12824413
|
blood
|
age: 26
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t12824413
|
| Sample_geo_accession | GSM287302
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287302/suppl/GSM287302.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901545
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287303 | GPL570 |
|
group-1-pt-t12920964
|
blood
|
age: 21
gender: male
final disposition: 88: Other (specify)
|
group-1-pt-t12920964
|
| Sample_geo_accession | GSM287303
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287303/suppl/GSM287303.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901525
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287304 | GPL570 |
|
group-1-pt-t13542489
|
blood
|
age: 47
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t13542489
|
| Sample_geo_accession | GSM287304
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287304/suppl/GSM287304.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901844
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287305 | GPL570 |
|
group-1-pt-t14324609
|
blood
|
age: 40
gender: male
final disposition: 09: Death
|
group-1-pt-t14324609
|
| Sample_geo_accession | GSM287305
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287305/suppl/GSM287305.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901399
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287306 | GPL570 |
|
group-1-pt-t14821887
|
blood
|
age: 48
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t14821887
|
| Sample_geo_accession | GSM287306
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287306/suppl/GSM287306.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901477
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287307 | GPL570 |
|
group-1-pt-t15812209
|
blood
|
age: 45
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t15812209
|
| Sample_geo_accession | GSM287307
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287307/suppl/GSM287307.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901876
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287308 | GPL570 |
|
group-1-pt-t16175538
|
blood
|
age: 34
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t16175538
|
| Sample_geo_accession | GSM287308
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287308/suppl/GSM287308.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901731
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287309 | GPL570 |
|
group-1-pt-t163143
|
blood
|
age: 43
gender: female
final disposition: 06: Home
|
group-1-pt-t163143
|
| Sample_geo_accession | GSM287309
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287309/suppl/GSM287309.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902077
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287310 | GPL570 |
|
group-1-pt-t16437161
|
blood
|
age: 51
gender: male
final disposition: 05: Home with services
|
group-1-pt-t16437161
|
| Sample_geo_accession | GSM287310
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287310/suppl/GSM287310.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902105
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287311 | GPL570 |
|
group-1-pt-t16644640
|
blood
|
age: 41
gender: male
final disposition: 05: Home with services
|
group-1-pt-t16644640
|
| Sample_geo_accession | GSM287311
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287311/suppl/GSM287311.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901654
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287312 | GPL570 |
|
group-1-pt-t16666198
|
blood
|
age: 27
gender: male
final disposition: 06: Home
|
group-1-pt-t16666198
|
| Sample_geo_accession | GSM287312
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287312/suppl/GSM287312.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901904
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287313 | GPL570 |
|
group-1-pt-t16744186
|
blood
|
age: 28
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t16744186
|
| Sample_geo_accession | GSM287313
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287313/suppl/GSM287313.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901459
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287314 | GPL570 |
|
group-1-pt-t17649932
|
blood
|
age: 41
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t17649932
|
| Sample_geo_accession | GSM287314
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287314/suppl/GSM287314.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902063
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287315 | GPL570 |
|
group-1-pt-t17826449
|
blood
|
age: 33
gender: male
final disposition: 06: Home
|
group-1-pt-t17826449
|
| Sample_geo_accession | GSM287315
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287315/suppl/GSM287315.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902051
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287316 | GPL570 |
|
group-1-pt-t18691395
|
blood
|
age: 26
gender: male
final disposition: 06: Home
|
group-1-pt-t18691395
|
| Sample_geo_accession | GSM287316
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287316/suppl/GSM287316.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901819
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287317 | GPL570 |
|
group-1-pt-t18794715
|
blood
|
age: 16
gender: male
final disposition: 06: Home
|
group-1-pt-t18794715
|
| Sample_geo_accession | GSM287317
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287317/suppl/GSM287317.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901679
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287318 | GPL570 |
|
group-1-pt-t19176208
|
blood
|
age: 50
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t19176208
|
| Sample_geo_accession | GSM287318
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287318/suppl/GSM287318.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902093
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287319 | GPL570 |
|
group-1-pt-t19228402
|
blood
|
age: 32
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t19228402
|
| Sample_geo_accession | GSM287319
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287319/suppl/GSM287319.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901418
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287320 | GPL570 |
|
group-1-pt-t19290858
|
blood
|
age: 31
gender: male
final disposition: 09: Death
|
group-1-pt-t19290858
|
| Sample_geo_accession | GSM287320
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287320/suppl/GSM287320.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901669
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287321 | GPL570 |
|
group-1-pt-t19582578
|
blood
|
age: 31
gender: female
final disposition: 06: Home
|
group-1-pt-t19582578
|
| Sample_geo_accession | GSM287321
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287321/suppl/GSM287321.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902133
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287322 | GPL570 |
|
group-1-pt-t19872404
|
blood
|
age: 51
gender: female
final disposition: 06: Home
|
group-1-pt-t19872404
|
| Sample_geo_accession | GSM287322
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287322/suppl/GSM287322.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902023
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287323 | GPL570 |
|
group-1-pt-t20055549
|
blood
|
age: 27
gender: female
final disposition: 06: Home
|
group-1-pt-t20055549
|
| Sample_geo_accession | GSM287323
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287323/suppl/GSM287323.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901763
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287324 | GPL570 |
|
group-1-pt-t20153774
|
blood
|
age: 41
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t20153774
|
| Sample_geo_accession | GSM287324
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287324/suppl/GSM287324.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902139
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287325 | GPL570 |
|
group-1-pt-t20200060
|
blood
|
age: 34
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t20200060
|
| Sample_geo_accession | GSM287325
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287325/suppl/GSM287325.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901949
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287326 | GPL570 |
|
group-1-pt-t20209854
|
blood
|
age: 43
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t20209854
|
| Sample_geo_accession | GSM287326
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287326/suppl/GSM287326.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902059
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287327 | GPL570 |
|
group-1-pt-t20810880
|
blood
|
age: 55
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t20810880
|
| Sample_geo_accession | GSM287327
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287327/suppl/GSM287327.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901684
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287328 | GPL570 |
|
group-1-pt-t21068100
|
blood
|
age: 48
gender: female
final disposition: 06: Home
|
group-1-pt-t21068100
|
| Sample_geo_accession | GSM287328
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287328/suppl/GSM287328.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901781
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287329 | GPL570 |
|
group-1-pt-t2128306
|
blood
|
age: 49
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t2128306
|
| Sample_geo_accession | GSM287329
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287329/suppl/GSM287329.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901461
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287330 | GPL570 |
|
group-1-pt-t21411022
|
blood
|
age: 27
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t21411022
|
| Sample_geo_accession | GSM287330
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287330/suppl/GSM287330.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901900
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287331 | GPL570 |
|
group-1-pt-t21452005
|
blood
|
age: 24
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t21452005
|
| Sample_geo_accession | GSM287331
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287331/suppl/GSM287331.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901651
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287332 | GPL570 |
|
group-1-pt-t224165
|
blood
|
age: 22
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t224165
|
| Sample_geo_accession | GSM287332
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287332/suppl/GSM287332.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901811
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287333 | GPL570 |
|
group-1-pt-t23054365
|
blood
|
age: 16
gender: male
final disposition: 06: Home
|
group-1-pt-t23054365
|
| Sample_geo_accession | GSM287333
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287333/suppl/GSM287333.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901536
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287334 | GPL570 |
|
group-1-pt-t23306982
|
blood
|
age: 51
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t23306982
|
| Sample_geo_accession | GSM287334
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287334/suppl/GSM287334.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902033
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287335 | GPL570 |
|
group-1-pt-t23748670
|
blood
|
age: 43
gender: male
final disposition: 06: Home
|
group-1-pt-t23748670
|
| Sample_geo_accession | GSM287335
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287335/suppl/GSM287335.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901937
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287336 | GPL570 |
|
group-1-pt-t23767201
|
blood
|
age: 55
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t23767201
|
| Sample_geo_accession | GSM287336
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287336/suppl/GSM287336.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901532
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287337 | GPL570 |
|
group-1-pt-t24532226
|
blood
|
age: 26
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t24532226
|
| Sample_geo_accession | GSM287337
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287337/suppl/GSM287337.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902149
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287338 | GPL570 |
|
group-1-pt-t24865344
|
blood
|
age: 20
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t24865344
|
| Sample_geo_accession | GSM287338
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287338/suppl/GSM287338.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901722
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287339 | GPL570 |
|
group-1-pt-t24884150
|
blood
|
age: 45
gender: male
final disposition: 05: Home with services
|
group-1-pt-t24884150
|
| Sample_geo_accession | GSM287339
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287339/suppl/GSM287339.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901988
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287340 | GPL570 |
|
group-1-pt-t25158203
|
blood
|
age: 54
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t25158203
|
| Sample_geo_accession | GSM287340
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287340/suppl/GSM287340.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901848
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287341 | GPL570 |
|
group-1-pt-t26407397
|
blood
|
age: 37
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t26407397
|
| Sample_geo_accession | GSM287341
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287341/suppl/GSM287341.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901676
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287342 | GPL570 |
|
group-1-pt-t26802595
|
blood
|
age: 27
gender: male
final disposition: 06: Home
|
group-1-pt-t26802595
|
| Sample_geo_accession | GSM287342
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287342/suppl/GSM287342.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902083
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287343 | GPL570 |
|
group-1-pt-t2684174
|
blood
|
age: 52
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t2684174
|
| Sample_geo_accession | GSM287343
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287343/suppl/GSM287343.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901975
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287344 | GPL570 |
|
group-1-pt-t2684459
|
blood
|
age: 32
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t2684459
|
| Sample_geo_accession | GSM287344
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287344/suppl/GSM287344.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901589
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287345 | GPL570 |
|
group-1-pt-t27151221
|
blood
|
age: 46
gender: male
final disposition: 07: Another acute care facility
|
group-1-pt-t27151221
|
| Sample_geo_accession | GSM287345
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287345/suppl/GSM287345.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901558
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287346 | GPL570 |
|
group-1-pt-t27248819
|
blood
|
age: 21
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t27248819
|
| Sample_geo_accession | GSM287346
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287346/suppl/GSM287346.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901751
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287347 | GPL570 |
|
group-1-pt-t29636425
|
blood
|
age: 28
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t29636425
|
| Sample_geo_accession | GSM287347
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287347/suppl/GSM287347.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901866
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287348 | GPL570 |
|
group-1-pt-t29753308
|
blood
|
age: 45
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t29753308
|
| Sample_geo_accession | GSM287348
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287348/suppl/GSM287348.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901609
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287349 | GPL570 |
|
group-1-pt-t30534587
|
blood
|
age: 35
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t30534587
|
| Sample_geo_accession | GSM287349
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287349/suppl/GSM287349.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901499
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287350 | GPL570 |
|
group-1-pt-t31082981
|
blood
|
age: 20
gender: male
final disposition: 06: Home
|
group-1-pt-t31082981
|
| Sample_geo_accession | GSM287350
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287350/suppl/GSM287350.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901825
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287351 | GPL570 |
|
group-1-pt-t31850232
|
blood
|
age: 40
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t31850232
|
| Sample_geo_accession | GSM287351
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287351/suppl/GSM287351.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901985
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287352 | GPL570 |
|
group-1-pt-t31938349
|
blood
|
age: 19
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t31938349
|
| Sample_geo_accession | GSM287352
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287352/suppl/GSM287352.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902002
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287353 | GPL570 |
|
group-1-pt-t32042281
|
blood
|
age: 18
gender: male
final disposition: 06: Home
|
group-1-pt-t32042281
|
| Sample_geo_accession | GSM287353
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287353/suppl/GSM287353.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902113
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287354 | GPL570 |
|
group-1-pt-t32734260
|
blood
|
age: 35
gender: male
final disposition: 06: Home
|
group-1-pt-t32734260
|
| Sample_geo_accession | GSM287354
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287354/suppl/GSM287354.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901405
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287355 | GPL570 |
|
group-1-pt-t32750360
|
blood
|
age: 20
gender: male
final disposition: 06: Home
|
group-1-pt-t32750360
|
| Sample_geo_accession | GSM287355
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287355/suppl/GSM287355.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901973
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287356 | GPL570 |
|
group-1-pt-t32950994
|
blood
|
age: 22
gender: female
final disposition: 09: Death
|
group-1-pt-t32950994
|
| Sample_geo_accession | GSM287356
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287356/suppl/GSM287356.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901557
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287357 | GPL570 |
|
group-1-pt-t33226222
|
blood
|
age: 18
gender: male
final disposition: 05: Home with services
|
group-1-pt-t33226222
|
| Sample_geo_accession | GSM287357
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287357/suppl/GSM287357.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902168
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287358 | GPL570 |
|
group-1-pt-t3396312
|
blood
|
age: 32
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t3396312
|
| Sample_geo_accession | GSM287358
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287358/suppl/GSM287358.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901656
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287359 | GPL570 |
|
group-1-pt-t3457955
|
blood
|
age: 25
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t3457955
|
| Sample_geo_accession | GSM287359
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287359/suppl/GSM287359.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901623
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287360 | GPL570 |
|
group-1-pt-t34670758
|
blood
|
age: 44
gender: male
final disposition: 06: Home
|
group-1-pt-t34670758
|
| Sample_geo_accession | GSM287360
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287360/suppl/GSM287360.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901548
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287361 | GPL570 |
|
group-1-pt-t34933880
|
blood
|
age: 47
gender: male
final disposition: 06: Home
|
group-1-pt-t34933880
|
| Sample_geo_accession | GSM287361
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287361/suppl/GSM287361.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901860
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287362 | GPL570 |
|
group-1-pt-t3896185
|
blood
|
age: 30
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t3896185
|
| Sample_geo_accession | GSM287362
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287362/suppl/GSM287362.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901714
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287363 | GPL570 |
|
group-1-pt-t4009237
|
blood
|
age: 47
gender: male
final disposition: 06: Home
|
group-1-pt-t4009237
|
| Sample_geo_accession | GSM287363
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287363/suppl/GSM287363.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901637
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287364 | GPL570 |
|
group-1-pt-t4253298
|
blood
|
age: 21
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t4253298
|
| Sample_geo_accession | GSM287364
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287364/suppl/GSM287364.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901982
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287365 | GPL570 |
|
group-1-pt-t4539940
|
blood
|
age: 49
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t4539940
|
| Sample_geo_accession | GSM287365
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287365/suppl/GSM287365.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901410
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287366 | GPL570 |
|
group-1-pt-t4972319
|
blood
|
age: 35
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t4972319
|
| Sample_geo_accession | GSM287366
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287366/suppl/GSM287366.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901629
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287367 | GPL570 |
|
group-1-pt-t5055720
|
blood
|
age: 28
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t5055720
|
| Sample_geo_accession | GSM287367
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287367/suppl/GSM287367.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901941
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287368 | GPL570 |
|
group-1-pt-t5376310
|
blood
|
age: 55
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t5376310
|
| Sample_geo_accession | GSM287368
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287368/suppl/GSM287368.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901520
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287369 | GPL570 |
|
group-1-pt-t5928763
|
blood
|
age: 18
gender: female
final disposition: 88: Other (specify)
|
group-1-pt-t5928763
|
| Sample_geo_accession | GSM287369
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287369/suppl/GSM287369.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901789
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287370 | GPL570 |
|
group-1-pt-t6435853
|
blood
|
age: 41
gender: female
final disposition: 06: Home
|
group-1-pt-t6435853
|
| Sample_geo_accession | GSM287370
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287370/suppl/GSM287370.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901590
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287371 | GPL570 |
|
group-1-pt-t7444072
|
blood
|
age: 49
gender: female
final disposition: 02: Skilled nursing facility
|
group-1-pt-t7444072
|
| Sample_geo_accession | GSM287371
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287371/suppl/GSM287371.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901862
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287372 | GPL570 |
|
group-1-pt-t7660790
|
blood
|
age: 31
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t7660790
|
| Sample_geo_accession | GSM287372
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287372/suppl/GSM287372.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901482
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287373 | GPL570 |
|
group-1-pt-t7726341
|
blood
|
age: 16
gender: male
final disposition: 06: Home
|
group-1-pt-t7726341
|
| Sample_geo_accession | GSM287373
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287373/suppl/GSM287373.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901479
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287374 | GPL570 |
|
group-1-pt-t8859499
|
blood
|
age: 50
gender: male
final disposition: 06: Home
|
group-1-pt-t8859499
|
| Sample_geo_accession | GSM287374
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287374/suppl/GSM287374.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901777
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287375 | GPL570 |
|
group-1-pt-t936103
|
blood
|
age: 24
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-1-pt-t936103
|
| Sample_geo_accession | GSM287375
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287375/suppl/GSM287375.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901906
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287376 | GPL570 |
|
group-1-pt-t9557192
|
blood
|
age: 22
gender: male
final disposition: 02: Skilled nursing facility
|
group-1-pt-t9557192
|
| Sample_geo_accession | GSM287376
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287376/suppl/GSM287376.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901970
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287377 | GPL570 |
|
group-2-ctl-c13735365
|
blood
|
age: 19
gender: female
final disposition: 06: Home
|
group-2-ctl-c13735365
|
| Sample_geo_accession | GSM287377
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287377/suppl/GSM287377.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901364
| | Sample_relation | Reanalyzed by: GSM909645
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287378 | GPL570 |
|
group-2-ctl-c14368019
|
blood
|
age: 17
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-ctl-c14368019
|
| Sample_geo_accession | GSM287378
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287378/suppl/GSM287378.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901365
| | Sample_relation | Reanalyzed by: GSM909646
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287379 | GPL570 |
|
group-2-ctl-c18243342
|
blood
|
age: 46
gender: male
final disposition: 05: Home with services
|
group-2-ctl-c18243342
|
| Sample_geo_accession | GSM287379
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287379/suppl/GSM287379.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901369
| | Sample_relation | Reanalyzed by: GSM909650
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287380 | GPL570 |
|
group-2-ctl-c18299580
|
blood
|
age: 23
gender: male
final disposition: 05: Home with services
|
group-2-ctl-c18299580
|
| Sample_geo_accession | GSM287380
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287380/suppl/GSM287380.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901370
| | Sample_relation | Reanalyzed by: GSM909651
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287381 | GPL570 |
|
group-2-ctl-c19453182
|
blood
|
age: 34
gender: female
final disposition: 06: Home
|
group-2-ctl-c19453182
|
| Sample_geo_accession | GSM287381
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287381/suppl/GSM287381.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901372
| | Sample_relation | Reanalyzed by: GSM909653
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287382 | GPL570 |
|
group-2-ctl-c21240736
|
blood
|
age: 54
gender: male
final disposition: 06: Home
|
group-2-ctl-c21240736
|
| Sample_geo_accession | GSM287382
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287382/suppl/GSM287382.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901373
| | Sample_relation | Reanalyzed by: GSM909655
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287383 | GPL570 |
|
group-2-ctl-c21422982
|
blood
|
age: 29
gender: male
final disposition: 06: Home
|
group-2-ctl-c21422982
|
| Sample_geo_accession | GSM287383
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287383/suppl/GSM287383.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901374
| | Sample_relation | Reanalyzed by: GSM909656
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287384 | GPL570 |
|
group-2-ctl-c21704142
|
blood
|
age: 18
gender: male
final disposition: control
|
group-2-ctl-c21704142
|
| Sample_geo_accession | GSM287384
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287384/suppl/GSM287384.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901375
| | Sample_relation | Reanalyzed by: GSM909657
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287385 | GPL570 |
|
group-2-ctl-c23203001
|
blood
|
age: 33
gender: female
final disposition: 07: Another acute care facility
|
group-2-ctl-c23203001
|
| Sample_geo_accession | GSM287385
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287385/suppl/GSM287385.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287386 | GPL570 |
|
group-2-ctl-c25052454
|
blood
|
age: 20
gender: male
final disposition: 06: Home
|
group-2-ctl-c25052454
|
| Sample_geo_accession | GSM287386
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287386/suppl/GSM287386.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901378
| | Sample_relation | Reanalyzed by: GSM909662
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287387 | GPL570 |
|
group-2-ctl-c29498112
|
blood
|
age: 48
gender: male
final disposition: 05: Home with services
|
group-2-ctl-c29498112
|
| Sample_geo_accession | GSM287387
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287387/suppl/GSM287387.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901383
| | Sample_relation | Reanalyzed by: GSM909668
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287388 | GPL570 |
|
group-2-ctl-c33135299
|
blood
|
age: 41
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-ctl-c33135299
|
| Sample_geo_accession | GSM287388
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287388/suppl/GSM287388.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901384
| | Sample_relation | Reanalyzed by: GSM909669
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287389 | GPL570 |
|
group-2-ctl-c34464946
|
blood
|
age: 25
gender: male
final disposition: 06: Home
|
group-2-ctl-c34464946
|
| Sample_geo_accession | GSM287389
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287389/suppl/GSM287389.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901388
| | Sample_relation | Reanalyzed by: GSM909673
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287390 | GPL570 |
|
group-2-ctl-c35041110
|
blood
|
age: 25
gender: male
final disposition: 05: Home with services
|
group-2-ctl-c35041110
|
| Sample_geo_accession | GSM287390
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287390/suppl/GSM287390.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901389
| | Sample_relation | Reanalyzed by: GSM909674
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287391 | GPL570 |
|
group-2-ctl-c6630359
|
blood
|
age: 25
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-ctl-c6630359
|
| Sample_geo_accession | GSM287391
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287391/suppl/GSM287391.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901360
| | Sample_relation | Reanalyzed by: GSM909677
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287392 | GPL570 |
|
group-2-ctl-c9113824
|
blood
|
age: 27
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-ctl-c9113824
|
| Sample_geo_accession | GSM287392
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287392/suppl/GSM287392.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901362
| | Sample_relation | Reanalyzed by: GSM909680
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287393 | GPL570 |
|
group-2-pt-t10899813
|
blood
|
age: 40
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t10899813
|
| Sample_geo_accession | GSM287393
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287393/suppl/GSM287393.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902079
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287394 | GPL570 |
|
group-2-pt-t10999830
|
blood
|
age: 45
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-pt-t10999830
|
| Sample_geo_accession | GSM287394
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287394/suppl/GSM287394.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901412
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287395 | GPL570 |
|
group-2-pt-t11200547
|
blood
|
age: 31
gender: female
final disposition: control
|
group-2-pt-t11200547
|
| Sample_geo_accession | GSM287395
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287395/suppl/GSM287395.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901422
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287396 | GPL570 |
|
group-2-pt-t1129691
|
blood
|
age: 23
gender: male
final disposition: 09: Death
|
group-2-pt-t1129691
|
| Sample_geo_accession | GSM287396
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287396/suppl/GSM287396.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901595
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287397 | GPL570 |
|
group-2-pt-t11498346
|
blood
|
age: 17
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t11498346
|
| Sample_geo_accession | GSM287397
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287397/suppl/GSM287397.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901799
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287398 | GPL570 |
|
group-2-pt-t12149903
|
blood
|
age: 48
gender: male
final disposition: 05: Home with services
|
group-2-pt-t12149903
|
| Sample_geo_accession | GSM287398
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287398/suppl/GSM287398.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901773
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287399 | GPL570 |
|
group-2-pt-t12449908
|
blood
|
age: 36
gender: male
final disposition: 09: Death
|
group-2-pt-t12449908
|
| Sample_geo_accession | GSM287399
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287399/suppl/GSM287399.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901542
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287400 | GPL570 |
|
group-2-pt-t12459034
|
blood
|
age: 21
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t12459034
|
| Sample_geo_accession | GSM287400
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287400/suppl/GSM287400.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901835
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287401 | GPL570 |
|
group-2-pt-t12485562
|
blood
|
age: 35
gender: female
final disposition: 06: Home
|
group-2-pt-t12485562
|
| Sample_geo_accession | GSM287401
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287401/suppl/GSM287401.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901992
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287402 | GPL570 |
|
group-2-pt-t12881564
|
blood
|
age: 33
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-pt-t12881564
|
| Sample_geo_accession | GSM287402
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287402/suppl/GSM287402.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901925
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287403 | GPL570 |
|
group-2-pt-t13213595
|
blood
|
age: 24
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t13213595
|
| Sample_geo_accession | GSM287403
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287403/suppl/GSM287403.CEL.gz
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287404 | GPL570 |
|
group-2-pt-t13365750
|
blood
|
age: 34
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t13365750
|
| Sample_geo_accession | GSM287404
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287404/suppl/GSM287404.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901729
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287405 | GPL570 |
|
group-2-pt-t13427118
|
blood
|
age: 29
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-pt-t13427118
|
| Sample_geo_accession | GSM287405
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287405/suppl/GSM287405.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901829
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287406 | GPL570 |
|
group-2-pt-t13513185
|
blood
|
age: 19
gender: female
final disposition: control
|
group-2-pt-t13513185
|
| Sample_geo_accession | GSM287406
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287406/suppl/GSM287406.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902010
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287407 | GPL570 |
|
group-2-pt-t13856354
|
blood
|
age: 40
gender: male
final disposition: 06: Home
|
group-2-pt-t13856354
|
| Sample_geo_accession | GSM287407
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287407/suppl/GSM287407.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901808
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287408 | GPL570 |
|
group-2-pt-t14755953
|
blood
|
age: 29
gender: female
final disposition: 06: Home
|
group-2-pt-t14755953
|
| Sample_geo_accession | GSM287408
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287408/suppl/GSM287408.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901510
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287409 | GPL570 |
|
group-2-pt-t14841022
|
blood
|
age: 37
gender: female
final disposition: 88: Other (specify)
|
group-2-pt-t14841022
|
| Sample_geo_accession | GSM287409
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287409/suppl/GSM287409.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901611
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287410 | GPL570 |
|
group-2-pt-t15111525
|
blood
|
age: 43
gender: male
final disposition: 06: Home
|
group-2-pt-t15111525
|
| Sample_geo_accession | GSM287410
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287410/suppl/GSM287410.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901634
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287411 | GPL570 |
|
group-2-pt-t15501307
|
blood
|
age: 36
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t15501307
|
| Sample_geo_accession | GSM287411
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287411/suppl/GSM287411.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902046
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287412 | GPL570 |
|
group-2-pt-t15733320
|
blood
|
age: 40
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t15733320
|
| Sample_geo_accession | GSM287412
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287412/suppl/GSM287412.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901802
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287413 | GPL570 |
|
group-2-pt-t16934338
|
blood
|
age: 33
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t16934338
|
| Sample_geo_accession | GSM287413
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287413/suppl/GSM287413.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901446
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287414 | GPL570 |
|
group-2-pt-t17044501
|
blood
|
age: 17
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t17044501
|
| Sample_geo_accession | GSM287414
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287414/suppl/GSM287414.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902119
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287415 | GPL570 |
|
group-2-pt-t17169324
|
blood
|
age: 43
gender: male
final disposition: 06: Home
|
group-2-pt-t17169324
|
| Sample_geo_accession | GSM287415
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287415/suppl/GSM287415.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901794
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287416 | GPL570 |
|
group-2-pt-t17593495
|
blood
|
age: 18
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t17593495
|
| Sample_geo_accession | GSM287416
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287416/suppl/GSM287416.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901454
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287417 | GPL570 |
|
group-2-pt-t1778836
|
blood
|
age: 45
gender: female
final disposition: control
|
group-2-pt-t1778836
|
| Sample_geo_accession | GSM287417
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287417/suppl/GSM287417.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902095
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287418 | GPL570 |
|
group-2-pt-t18145446
|
blood
|
age: 27
gender: female
final disposition: 88: Other (specify)
|
group-2-pt-t18145446
|
| Sample_geo_accession | GSM287418
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287418/suppl/GSM287418.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901672
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287419 | GPL570 |
|
group-2-pt-t18368456
|
blood
|
age: 48
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t18368456
|
| Sample_geo_accession | GSM287419
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287419/suppl/GSM287419.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901966
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287420 | GPL570 |
|
group-2-pt-t18509360
|
blood
|
age: 24
gender: female
final disposition: 05: Home with services
|
group-2-pt-t18509360
|
| Sample_geo_accession | GSM287420
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287420/suppl/GSM287420.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901929
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287421 | GPL570 |
|
group-2-pt-t18932716
|
blood
|
age: 35
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-pt-t18932716
|
| Sample_geo_accession | GSM287421
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287421/suppl/GSM287421.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901874
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287422 | GPL570 |
|
group-2-pt-t19792345
|
blood
|
age: 18
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t19792345
|
| Sample_geo_accession | GSM287422
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287422/suppl/GSM287422.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902164
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287423 | GPL570 |
|
group-2-pt-t20325754
|
blood
|
age: 21
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t20325754
|
| Sample_geo_accession | GSM287423
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287423/suppl/GSM287423.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901565
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287424 | GPL570 |
|
group-2-pt-t20628135
|
blood
|
age: 50
gender: female
final disposition: 06: Home
|
group-2-pt-t20628135
|
| Sample_geo_accession | GSM287424
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287424/suppl/GSM287424.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901567
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287425 | GPL570 |
|
group-2-pt-t20710123
|
blood
|
age: 21
gender: male
final disposition: 06: Home
|
group-2-pt-t20710123
|
| Sample_geo_accession | GSM287425
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287425/suppl/GSM287425.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902039
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287426 | GPL570 |
|
group-2-pt-t2113833
|
blood
|
age: 33
gender: male
final disposition: 06: Home
|
group-2-pt-t2113833
|
| Sample_geo_accession | GSM287426
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287426/suppl/GSM287426.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901741
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287427 | GPL570 |
|
group-2-pt-t21347674
|
blood
|
age: 21
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-pt-t21347674
|
| Sample_geo_accession | GSM287427
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287427/suppl/GSM287427.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901786
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287428 | GPL570 |
|
group-2-pt-t21659093
|
blood
|
age: 18
gender: male
final disposition: control
|
group-2-pt-t21659093
|
| Sample_geo_accession | GSM287428
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287428/suppl/GSM287428.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902013
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287429 | GPL570 |
|
group-2-pt-t22528008
|
blood
|
age: 40
gender: female
final disposition: 06: Home
|
group-2-pt-t22528008
|
| Sample_geo_accession | GSM287429
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287429/suppl/GSM287429.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901877
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287430 | GPL570 |
|
group-2-pt-t22676948
|
blood
|
age: 17
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t22676948
|
| Sample_geo_accession | GSM287430
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287430/suppl/GSM287430.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901932
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287431 | GPL570 |
|
group-2-pt-t2273448
|
blood
|
age: 49
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t2273448
|
| Sample_geo_accession | GSM287431
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287431/suppl/GSM287431.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901962
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287432 | GPL570 |
|
group-2-pt-t23355260
|
blood
|
age: 25
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t23355260
|
| Sample_geo_accession | GSM287432
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287432/suppl/GSM287432.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901699
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287433 | GPL570 |
|
group-2-pt-t23445359
|
blood
|
age: 25
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t23445359
|
| Sample_geo_accession | GSM287433
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287433/suppl/GSM287433.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902003
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287434 | GPL570 |
|
group-2-pt-t24021044
|
blood
|
age: 28
gender: male
final disposition: 06: Home
|
group-2-pt-t24021044
|
| Sample_geo_accession | GSM287434
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287434/suppl/GSM287434.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901426
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287435 | GPL570 |
|
group-2-pt-t25959229
|
blood
|
age: 51
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t25959229
|
| Sample_geo_accession | GSM287435
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287435/suppl/GSM287435.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901743
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287436 | GPL570 |
|
group-2-pt-t26350190
|
blood
|
age: 52
gender: male
final disposition: 06: Home
|
group-2-pt-t26350190
|
| Sample_geo_accession | GSM287436
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287436/suppl/GSM287436.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901692
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287437 | GPL570 |
|
group-2-pt-t27159239
|
blood
|
age: 51
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-pt-t27159239
|
| Sample_geo_accession | GSM287437
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287437/suppl/GSM287437.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902153
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287438 | GPL570 |
|
group-2-pt-t27298010
|
blood
|
age: 22
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t27298010
|
| Sample_geo_accession | GSM287438
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287438/suppl/GSM287438.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901660
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287439 | GPL570 |
|
group-2-pt-t27890110
|
blood
|
age: 18
gender: male
final disposition: control
|
group-2-pt-t27890110
|
| Sample_geo_accession | GSM287439
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287439/suppl/GSM287439.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901854
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287440 | GPL570 |
|
group-2-pt-t28175962
|
blood
|
age: 44
gender: female
final disposition: 05: Home with services
|
group-2-pt-t28175962
|
| Sample_geo_accession | GSM287440
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287440/suppl/GSM287440.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902027
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287441 | GPL570 |
|
group-2-pt-t28856947
|
blood
|
age: 17
gender: male
final disposition: 05: Home with services
|
group-2-pt-t28856947
|
| Sample_geo_accession | GSM287441
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287441/suppl/GSM287441.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901750
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287442 | GPL570 |
|
group-2-pt-t29544461
|
blood
|
age: 38
gender: male
final disposition: 05: Home with services
|
group-2-pt-t29544461
|
| Sample_geo_accession | GSM287442
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287442/suppl/GSM287442.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901911
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287443 | GPL570 |
|
group-2-pt-t30240283
|
blood
|
age: 44
gender: male
final disposition: 05: Home with services
|
group-2-pt-t30240283
|
| Sample_geo_accession | GSM287443
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287443/suppl/GSM287443.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901695
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287444 | GPL570 |
|
group-2-pt-t30640843
|
blood
|
age: 26
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t30640843
|
| Sample_geo_accession | GSM287444
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287444/suppl/GSM287444.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901577
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287445 | GPL570 |
|
group-2-pt-t31016255
|
blood
|
age: 31
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t31016255
|
| Sample_geo_accession | GSM287445
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287445/suppl/GSM287445.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902141
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287446 | GPL570 |
|
group-2-pt-t31254381
|
blood
|
age: 29
gender: male
final disposition: 09: Death
|
group-2-pt-t31254381
|
| Sample_geo_accession | GSM287446
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287446/suppl/GSM287446.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901550
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287447 | GPL570 |
|
group-2-pt-t31980419
|
blood
|
age: 54
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t31980419
|
| Sample_geo_accession | GSM287447
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287447/suppl/GSM287447.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902118
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287448 | GPL570 |
|
group-2-pt-t32091878
|
blood
|
age: 43
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t32091878
|
| Sample_geo_accession | GSM287448
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287448/suppl/GSM287448.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901717
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287449 | GPL570 |
|
group-2-pt-t3217508
|
blood
|
age: 39
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t3217508
|
| Sample_geo_accession | GSM287449
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287449/suppl/GSM287449.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902090
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287450 | GPL570 |
|
group-2-pt-t322025
|
blood
|
age: 19
gender: male
final disposition: control
|
group-2-pt-t322025
|
| Sample_geo_accession | GSM287450
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287450/suppl/GSM287450.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901997
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287451 | GPL570 |
|
group-2-pt-t32342344
|
blood
|
age: 21
gender: male
final disposition: 88: Other (specify)
|
group-2-pt-t32342344
|
| Sample_geo_accession | GSM287451
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287451/suppl/GSM287451.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901912
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287452 | GPL570 |
|
group-2-pt-t32627779
|
blood
|
age: 52
gender: female
final disposition: 02: Skilled nursing facility
|
group-2-pt-t32627779
|
| Sample_geo_accession | GSM287452
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287452/suppl/GSM287452.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901882
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287453 | GPL570 |
|
group-2-pt-t32827992
|
blood
|
age: 28
gender: female
final disposition: 06: Home
|
group-2-pt-t32827992
|
| Sample_geo_accession | GSM287453
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287453/suppl/GSM287453.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901442
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287454 | GPL570 |
|
group-2-pt-t32937784
|
blood
|
age: 24
gender: female
final disposition: 06: Home
|
group-2-pt-t32937784
|
| Sample_geo_accession | GSM287454
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287454/suppl/GSM287454.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901640
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287455 | GPL570 |
|
group-2-pt-t33433141
|
blood
|
age: 28
gender: female
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t33433141
|
| Sample_geo_accession | GSM287455
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287455/suppl/GSM287455.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901473
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287456 | GPL570 |
|
group-2-pt-t33640716
|
blood
|
age: 34
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t33640716
|
| Sample_geo_accession | GSM287456
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287456/suppl/GSM287456.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901956
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287457 | GPL570 |
|
group-2-pt-t34198779
|
blood
|
age: 36
gender: male
final disposition: 05: Home with services
|
group-2-pt-t34198779
|
| Sample_geo_accession | GSM287457
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287457/suppl/GSM287457.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902019
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287458 | GPL570 |
|
group-2-pt-t34247523
|
blood
|
age: 40
gender: male
final disposition: 01: Inpatient rehabilitation facility
|
group-2-pt-t34247523
|
| Sample_geo_accession | GSM287458
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287458/suppl/GSM287458.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901753
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287459 | GPL570 |
|
group-2-pt-t34814188
|
blood
|
age: 34
gender: male
final disposition: 02: Skilled nursing facility
|
group-2-pt-t34814188
|
| Sample_geo_accession | GSM287459
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287459/suppl/GSM287459.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901887
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287460 | GPL570 |
|
group-2-pt-t3554510
|
blood
|
age: 41
gender: female
final disposition: 06: Home
|
group-2-pt-t3554510
|
| Sample_geo_accession | GSM287460
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287460/suppl/GSM287460.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901706
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287461 | GPL570 |
|
group-2-pt-t4508690
|
blood
|
age: 41
gender: female
final disposition: control
|
group-2-pt-t4508690
|
| Sample_geo_accession | GSM287461
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287461/suppl/GSM287461.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901496
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287462 | GPL570 |
|
group-2-pt-t4965319
|
blood
|
age: 35
gender: male
final disposition: control
|
group-2-pt-t4965319
|
| Sample_geo_accession | GSM287462
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287462/suppl/GSM287462.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901396
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287463 | GPL570 |
|
group-2-pt-t5045596
|
blood
|
age: 30
gender: female
final disposition: control
|
group-2-pt-t5045596
|
| Sample_geo_accession | GSM287463
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287463/suppl/GSM287463.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901855
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287464 | GPL570 |
|
group-2-pt-t6243678
|
blood
|
age: 20
gender: male
final disposition: control
|
group-2-pt-t6243678
|
| Sample_geo_accession | GSM287464
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287464/suppl/GSM287464.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902129
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287465 | GPL570 |
|
group-2-pt-t6495589
|
blood
|
age: 26
gender: female
final disposition: control
|
group-2-pt-t6495589
|
| Sample_geo_accession | GSM287465
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287465/suppl/GSM287465.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901433
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287466 | GPL570 |
|
group-2-pt-t6861920
|
blood
|
age: 34
gender: female
final disposition: control
|
group-2-pt-t6861920
|
| Sample_geo_accession | GSM287466
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287466/suppl/GSM287466.CEL.gz
| | Sample_relation | Reanalyzed by: GSM902098
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287467 | GPL570 |
|
group-2-pt-t7061623
|
blood
|
age: 28
gender: female
final disposition: control
|
group-2-pt-t7061623
|
| Sample_geo_accession | GSM287467
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287467/suppl/GSM287467.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901506
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287468 | GPL570 |
|
group-2-pt-t7212104
|
blood
|
age: 23
gender: male
final disposition: control
|
group-2-pt-t7212104
|
| Sample_geo_accession | GSM287468
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287468/suppl/GSM287468.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901957
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287469 | GPL570 |
|
group-2-pt-t8209678
|
blood
|
age: 32
gender: male
final disposition: control
|
group-2-pt-t8209678
|
| Sample_geo_accession | GSM287469
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287469/suppl/GSM287469.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901466
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287470 | GPL570 |
|
group-2-pt-t8624689
|
blood
|
age: 37
gender: male
final disposition: control
|
group-2-pt-t8624689
|
| Sample_geo_accession | GSM287470
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287470/suppl/GSM287470.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901893
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
GSM287471 | GPL570 |
|
group-2-pt-t9308516
|
blood
|
age: 19
gender: male
final disposition: control
|
group-2-pt-t9308516
|
| Sample_geo_accession | GSM287471
| | Sample_status | Public on Apr 13 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Jun 12 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was harvested using the RNeasy RNA Isolation kit standard protocol (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual rev 3, 2002, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix GeneChip Fluidics Station FS 4500.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner G3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software (GCOS 1.3) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | IDDC,,Inflammation & the Host Response to Injury
| | Sample_contact_email | data_curator@gluegrant.org
| | Sample_contact_phone | 617 726 3447
| | Sample_contact_laboratory | Burn & Trauma Research
| | Sample_contact_department | Department of Surgery
| | Sample_contact_institute | Massachusetts General Hospital
| | Sample_contact_address | 55 Fruit Street, GRV 1302
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02114
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://www.gluegrant.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287471/suppl/GSM287471.CEL.gz
| | Sample_relation | Reanalyzed by: GSM901501
| | Sample_series_id | GSE11375
| | Sample_data_row_count | 54675
| | |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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