Search results for the GEO ID: GSE11381  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM287517 | GPL339 |
|
cells_newborn_1
|
pooled primary keratinocyte cultures
|
age: newborn
strain: C57 DBA FVB mixed
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287517
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287517/suppl/GSM287517.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287518 | GPL339 |
|
Cells_newborn_2
|
pooled primary keratinocyte cultures
|
age: newborn
strain: C57 DBA FVB mixed
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287518
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287518/suppl/GSM287518.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287520 | GPL339 |
|
Cells_newborn_3
|
pooled primary keratinocyte cultures
|
age: newborn
strain: FVB
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287520
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287520/suppl/GSM287520.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287522 | GPL339 |
|
Cells_newborn_4
|
pooled primary keratinocyte cultures
|
age: newborn
strain: FVB
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287522
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287522/suppl/GSM287522.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287523 | GPL339 |
|
Cells_newborn_5
|
pooled primary keratinocyte cultures
|
age: newborn
strain: FVB
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287523
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287523/suppl/GSM287523.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287524 | GPL339 |
|
tissue_30days_1
|
skin tissue
|
age: 30 days old
strain: C57 DBA FVB mixed
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287524
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287524/suppl/GSM287524.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287525 | GPL339 |
|
tissue_30days_2
|
skin tissue
|
age: 30 days old
strain: C57 DBA FVB mixed
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287525
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287525/suppl/GSM287525.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287526 | GPL339 |
|
tissue_30days_3
|
skin tissue
|
age: 30 days old
strain: C57 DBA FVB mixed
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287526
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287526/suppl/GSM287526.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287527 | GPL339 |
|
tissue_newborn_1
|
skin tissue
|
age: newborn
strain: FVB
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287527
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287527/suppl/GSM287527.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287528 | GPL339 |
|
tissue_newborn_2
|
skin tissue
|
age: newborn
strain: FVB
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287528
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Primary keratinocytes were obtained from newborn mice as described in Santos et al J Biol Chem 277, 19122 (2002). Pooled cells from five different mice of same genotype were cultured in low Ca2+ medium for no longer that 3 days without passage.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287528/suppl/GSM287528.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287529 | GPL339 |
|
tissue_30days_4
|
skin tissue
|
age: 30 days old
strain: C57 DBA FVB mixed
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287529
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287529/suppl/GSM287529.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
|
GSM287530 | GPL339 |
|
tissue_30days_5
|
skin tissue
|
age: 30 days old
strain: C57 DBA FVB mixed
tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM287530
| | Sample_status | Public on Aug 07 2009
| | Sample_submission_date | May 07 2008
| | Sample_last_update_date | Aug 06 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Fibrous Tissue Mini Kit (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standards
| | Sample_hyb_protocol | Affymetrix standards
| | Sample_scan_protocol | Affymetrix standards
| | Sample_data_processing | RMA normalization, log2 transformed
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM287nnn/GSM287530/suppl/GSM287530.CEL.gz
| | Sample_series_id | GSE11381
| | Sample_data_row_count | 22690
| | |
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