Search results for the GEO ID: GSE11440  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM288491 | GPL570 |
|
HT29 sensitive cells replicate 1
|
HT29 methotrexate-sensitive cells
|
cell line: HT29
cell type: colon cancer
methotrexate sensitivity: sensitive
|
Gene expression profile of HT29 cells sensitive to Methotrexate.
|
| Sample_geo_accession | GSM288491
| | Sample_status | Public on Sep 08 2008
| | Sample_submission_date | May 14 2008
| | Sample_last_update_date | Jun 16 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 plus 2.0
| | Sample_hyb_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_scan_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_data_processing | Value generated using MAS 5.0 non-scaled
| | Sample_platform_id | GPL570
| | Sample_contact_name | carlos,j,ciudad
| | Sample_contact_email | cciudad@ub.edu
| | Sample_contact_phone | +34-93-403-4455
| | Sample_contact_fax | +34-93-402-4520
| | Sample_contact_laboratory | school of pharmacy
| | Sample_contact_department | biochemistry and molecular biology
| | Sample_contact_institute | university of barcelona
| | Sample_contact_address | av. diagonal 643
| | Sample_contact_city | barcelona
| | Sample_contact_state | barcelona
| | Sample_contact_zip/postal_code | 08028
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM288nnn/GSM288491/suppl/GSM288491.CEL.gz
| | Sample_series_id | GSE11440
| | Sample_series_id | GSE16648
| | Sample_data_row_count | 54675
| | |
|
GSM288497 | GPL570 |
|
HT29 sensitive cells replicate 2
|
HT29 methotrexate-sensitive cells
|
cell line: HT29
cell type: colon cancer
methotrexate sensitivity: sensitive
|
Gene expression profile of HT29 cells sensitive to Methotrexate.
|
| Sample_geo_accession | GSM288497
| | Sample_status | Public on Sep 08 2008
| | Sample_submission_date | May 14 2008
| | Sample_last_update_date | Jun 16 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 plus 2.0
| | Sample_hyb_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_scan_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_data_processing | Value generated using MAS 5.0 non-scaled
| | Sample_platform_id | GPL570
| | Sample_contact_name | carlos,j,ciudad
| | Sample_contact_email | cciudad@ub.edu
| | Sample_contact_phone | +34-93-403-4455
| | Sample_contact_fax | +34-93-402-4520
| | Sample_contact_laboratory | school of pharmacy
| | Sample_contact_department | biochemistry and molecular biology
| | Sample_contact_institute | university of barcelona
| | Sample_contact_address | av. diagonal 643
| | Sample_contact_city | barcelona
| | Sample_contact_state | barcelona
| | Sample_contact_zip/postal_code | 08028
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM288nnn/GSM288497/suppl/GSM288497.CEL.gz
| | Sample_series_id | GSE11440
| | Sample_series_id | GSE16648
| | Sample_data_row_count | 54675
| | |
|
GSM288499 | GPL570 |
|
HT29 sensitive cells replicate 3
|
HT29 methotrexate-sensitive cells
|
cell line: HT29
cell type: colon cancer
methotrexate sensitivity: sensitive
|
Gene expression profile of HT29 cells sensitive to Methotrexate.
|
| Sample_geo_accession | GSM288499
| | Sample_status | Public on Sep 08 2008
| | Sample_submission_date | May 14 2008
| | Sample_last_update_date | Jun 16 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 plus 2.0
| | Sample_hyb_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_scan_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_data_processing | Value generated using MAS 5.0 non-scaled
| | Sample_platform_id | GPL570
| | Sample_contact_name | carlos,j,ciudad
| | Sample_contact_email | cciudad@ub.edu
| | Sample_contact_phone | +34-93-403-4455
| | Sample_contact_fax | +34-93-402-4520
| | Sample_contact_laboratory | school of pharmacy
| | Sample_contact_department | biochemistry and molecular biology
| | Sample_contact_institute | university of barcelona
| | Sample_contact_address | av. diagonal 643
| | Sample_contact_city | barcelona
| | Sample_contact_state | barcelona
| | Sample_contact_zip/postal_code | 08028
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM288nnn/GSM288499/suppl/GSM288499.CEL.gz
| | Sample_series_id | GSE11440
| | Sample_series_id | GSE16648
| | Sample_data_row_count | 54675
| | |
|
GSM288501 | GPL570 |
|
HT29 resistant cells replicate 1
|
HT29 methotrexate-resistant cells
|
cell line: HT29
cell type: colon cancer
methotrexate sensitivity: resistant
|
Gene expression profile of HT29 cells resistant to Methotrexate.
|
| Sample_geo_accession | GSM288501
| | Sample_status | Public on Sep 08 2008
| | Sample_submission_date | May 14 2008
| | Sample_last_update_date | Jun 16 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 plus 2.0
| | Sample_hyb_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_scan_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_data_processing | Value generated using MAS 5.0 non-scaled
| | Sample_platform_id | GPL570
| | Sample_contact_name | carlos,j,ciudad
| | Sample_contact_email | cciudad@ub.edu
| | Sample_contact_phone | +34-93-403-4455
| | Sample_contact_fax | +34-93-402-4520
| | Sample_contact_laboratory | school of pharmacy
| | Sample_contact_department | biochemistry and molecular biology
| | Sample_contact_institute | university of barcelona
| | Sample_contact_address | av. diagonal 643
| | Sample_contact_city | barcelona
| | Sample_contact_state | barcelona
| | Sample_contact_zip/postal_code | 08028
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM288nnn/GSM288501/suppl/GSM288501.CEL.gz
| | Sample_series_id | GSE11440
| | Sample_series_id | GSE16648
| | Sample_data_row_count | 54675
| | |
|
GSM288502 | GPL570 |
|
HT29 resistant cells replicate 2
|
HT29 methotrexate-resistant cells
|
cell line: HT29
cell type: colon cancer
methotrexate sensitivity: resistant
|
Gene expression profile of HT29 cells resistant to Methotrexate.
|
| Sample_geo_accession | GSM288502
| | Sample_status | Public on Sep 08 2008
| | Sample_submission_date | May 14 2008
| | Sample_last_update_date | Jun 16 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 plus 2.0
| | Sample_hyb_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_scan_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_data_processing | Value generated using MAS 5.0 non-scaled
| | Sample_platform_id | GPL570
| | Sample_contact_name | carlos,j,ciudad
| | Sample_contact_email | cciudad@ub.edu
| | Sample_contact_phone | +34-93-403-4455
| | Sample_contact_fax | +34-93-402-4520
| | Sample_contact_laboratory | school of pharmacy
| | Sample_contact_department | biochemistry and molecular biology
| | Sample_contact_institute | university of barcelona
| | Sample_contact_address | av. diagonal 643
| | Sample_contact_city | barcelona
| | Sample_contact_state | barcelona
| | Sample_contact_zip/postal_code | 08028
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM288nnn/GSM288502/suppl/GSM288502.CEL.gz
| | Sample_series_id | GSE11440
| | Sample_series_id | GSE16648
| | Sample_data_row_count | 54675
| | |
|
GSM288536 | GPL570 |
|
HT29 resistant cells replicate 3
|
HT29 methotrexate-resistant cells
|
cell line: HT29
cell type: colon cancer
methotrexate sensitivity: resistant
|
Gene expression profile of HT29 cells resistant to Methotrexate.
|
| Sample_geo_accession | GSM288536
| | Sample_status | Public on Sep 08 2008
| | Sample_submission_date | May 14 2008
| | Sample_last_update_date | Jun 16 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 plus 2.0
| | Sample_hyb_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_scan_protocol | Affymetrix protocol for HG U133 plus 2.0
| | Sample_data_processing | Value generated using MAS 5.0 non-scaled
| | Sample_platform_id | GPL570
| | Sample_contact_name | carlos,j,ciudad
| | Sample_contact_email | cciudad@ub.edu
| | Sample_contact_phone | +34-93-403-4455
| | Sample_contact_fax | +34-93-402-4520
| | Sample_contact_laboratory | school of pharmacy
| | Sample_contact_department | biochemistry and molecular biology
| | Sample_contact_institute | university of barcelona
| | Sample_contact_address | av. diagonal 643
| | Sample_contact_city | barcelona
| | Sample_contact_state | barcelona
| | Sample_contact_zip/postal_code | 08028
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM288nnn/GSM288536/suppl/GSM288536.CEL.gz
| | Sample_series_id | GSE11440
| | Sample_series_id | GSE16648
| | Sample_data_row_count | 54675
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
