Search results for the GEO ID: GSE11510  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM289889 | GPL570 |
|
UC719
|
total RNA
|
Umbilical cord, primary (2640-UC719)
|
Gene expression data from umbilical cord cells (primary).
|
| Sample_geo_accession | GSM289889
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289889/suppl/GSM289889.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289889/suppl/GSM289889.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289890 | GPL570 |
|
PLCP535
|
total RNA
|
Chorionic plate, primary (2641-PLCP535)
|
Gene expression data from chorionic plate cells (primary).
|
| Sample_geo_accession | GSM289890
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289890/suppl/GSM289890.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289890/suppl/GSM289890.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289891 | GPL570 |
|
AE919
|
total RNA
|
Amniotic epithelium, primary (2642-AE919)
|
Gene expression data from amniotic epithelium cells (primary).
|
| Sample_geo_accession | GSM289891
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289891/suppl/GSM289891.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289891/suppl/GSM289891.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289892 | GPL570 |
|
AM920
|
total RNA
|
Amniotic mesoderm, primary (2644-AM920.)
|
Gene expression data from amniotic mesoderm cells (primary).
|
| Sample_geo_accession | GSM289892
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289892/suppl/GSM289892.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289892/suppl/GSM289892.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289893 | GPL570 |
|
UC723
|
total RNA
|
Umbilical cord, primary (2645-UC723)
|
Gene expression data from umbilical cord cells (primary).
|
| Sample_geo_accession | GSM289893
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289893/suppl/GSM289893.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289893/suppl/GSM289893.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289894 | GPL570 |
|
PLCV539
|
total RNA
|
Villous chorion, primary (2646-PLCV539)
|
Gene expression data from villous chorion cells (primary).
|
| Sample_geo_accession | GSM289894
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289894/suppl/GSM289894.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289894/suppl/GSM289894.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289895 | GPL570 |
|
PLD-1
|
total RNA
|
Decidua basalis, primary (2647-PLD-1)
|
Gene expression data from decidua basalis cells (primary).
|
| Sample_geo_accession | GSM289895
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289895/suppl/GSM289895.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289895/suppl/GSM289895.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289896 | GPL570 |
|
EPC100
|
total RNA
|
E6, E7, hTERT, Human endometrial cell (2610-Re_1300EPC100)
|
Gene expression data from endometrial cells with E6, E7, hTERT.
|
| Sample_geo_accession | GSM289896
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289896/suppl/GSM289896.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289896/suppl/GSM289896.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289897 | GPL570 |
|
EPC214
|
total RNA
|
E6, E7, hTERT, Human endometrial cell (2611-Re_1301EPC214)
|
Gene expression data from endometrial cells with E6, E7, hTERT.
|
| Sample_geo_accession | GSM289897
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289897/suppl/GSM289897.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289897/suppl/GSM289897.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289898 | GPL570 |
|
UCB302
|
total RNA
|
Cord blood, primary (2612-Re_1302UCB302)
|
Gene expression data from cord blood cells (primary).
|
| Sample_geo_accession | GSM289898
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289898/suppl/GSM289898.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289898/suppl/GSM289898.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289899 | GPL570 |
|
UCB302TERT
|
total RNA
|
hTERT, cord blood (2613-Re_1501UCB302TERT)
|
Gene expression data cord blood cells with hTERT.
|
| Sample_geo_accession | GSM289899
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289899/suppl/GSM289899.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289899/suppl/GSM289899.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289900 | GPL570 |
|
E4
|
total RNA
|
Menstruation blood, primary (2614-Re_1687#E4)
|
Gene expression data from menstruation blood cells (primary).
|
| Sample_geo_accession | GSM289900
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289900/suppl/GSM289900.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289900/suppl/GSM289900.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289901 | GPL570 |
|
E5
|
total RNA
|
Menstruation blood, primary (2615-Re_1689#E5)
|
Gene expression data from menstruation blood cells (primary).
|
| Sample_geo_accession | GSM289901
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289901/suppl/GSM289901.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289901/suppl/GSM289901.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289902 | GPL570 |
|
E6
|
total RNA
|
Menstruation blood, primary (2616-Re_1691#E6)
|
Gene expression data from menstruation blood cells (primary).
|
| Sample_geo_accession | GSM289902
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289902/suppl/GSM289902.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289902/suppl/GSM289902.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289903 | GPL570 |
|
UCB408
|
total RNA
|
Cord blood, primary (2617-Re_1759UCB408)
|
Gene expression data from cord blood cells (primary).
|
| Sample_geo_accession | GSM289903
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289903/suppl/GSM289903.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289903/suppl/GSM289903.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289904 | GPL570 |
|
UCB408E6E7-31
|
total RNA
|
E6, E7, hTERT, cord blood (2630-Re_1760UCB408E6E7-31)
|
Gene expression data from cord blood cells with E6, E7, hTERT.
|
| Sample_geo_accession | GSM289904
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289904/suppl/GSM289904.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289904/suppl/GSM289904.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
GSM289905 | GPL570 |
|
UCB408E7-32
|
total RNA
|
E7, hTERT, cord blood (2631-Re_1767UCB408E7-32)
|
Gene expression data from cord blood cells with E7, hTERT.
|
| Sample_geo_accession | GSM289905
| | Sample_status | Public on May 20 2008
| | Sample_submission_date | May 20 2008
| | Sample_last_update_date | May 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated with the RNeasy Mini Kit (Qiagen), according to manufacture's instructions.). Genomic DNA was eliminated by DNase I (TAKARA BIO INC.) treatments.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was subjected to in vitro transcription in the presence of biotinylated nucleoside triphosphates using the Enzo BioArray HighYield RNA Transcript Labeling Kit (Enzo Life Sciences), according to the manufacturer's protocol (One-Cycle Target Labeling and Control Reagent package).
| | Sample_hyb_protocol | Biotinylated cRNA was hybridized with a probe array for 16h at 45C, and the hybridized biotinylated cRNA was stained with streptavidin-PE.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner (Palo Alto).
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Akihiro,,Umezawa
| | Sample_contact_email | umezawa@1985.jukuin.keio.ac.jp
| | Sample_contact_phone | 81-3-5494-7047
| | Sample_contact_fax | 81-3-5494-7048
| | Sample_contact_department | Reproductive Biology
| | Sample_contact_institute | National Center for Child Health and Development
| | Sample_contact_address | 2-10-1 Okura
| | Sample_contact_city | Setagaya-ku
| | Sample_contact_state | Tokyo
| | Sample_contact_zip/postal_code | 157-8535
| | Sample_contact_country | Japan
| | Sample_contact_web_link | http://1985.jukuin.keio.ac.jp/umezawa/HTML
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289905/suppl/GSM289905.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM289nnn/GSM289905/suppl/GSM289905.EXP.gz
| | Sample_series_id | GSE11510
| | Sample_data_row_count | 54675
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
Enter the group name here: |
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