Search results for the GEO ID: GSE11687  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM296814 | GPL1261 |
|
control blastocyst, replicate 1
|
control blastocyst
|
normal mouse blastocyst
|
Gene expression data from normal mouse blastocyst
|
| Sample_geo_accession | GSM296814
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296814/suppl/GSM296814.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296815 | GPL1261 |
|
control blastocyst, replicate 2
|
control blastocyst
|
control mouse blastocyst
|
Gene expression data from normal mouse blastocyst
|
| Sample_geo_accession | GSM296815
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296815/suppl/GSM296815.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296816 | GPL1261 |
|
control blastocyst, replicate 3
|
control blastocyst
|
control mouse blastocyst
|
Gene expression data from normal mouse blastocyst
|
| Sample_geo_accession | GSM296816
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296816/suppl/GSM296816.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296817 | GPL1261 |
|
control blastocyst, replicate 4
|
control blastocyst
|
control blastocyst
|
Gene expression data from normal mouse blastocyst
|
| Sample_geo_accession | GSM296817
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296817/suppl/GSM296817.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296818 | GPL1261 |
|
blastocyst treated by 20 pulses, replicate 1
|
blastocyst treated by 20 Ca2+ pulses
|
blastocyst treated by 20 pulses
|
Gene expression data from mouse blastocyst treated by 20 pulses
|
| Sample_geo_accession | GSM296818
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296818/suppl/GSM296818.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296819 | GPL1261 |
|
blastocyst treated by 20 pulses, replicate 3
|
blastocyst treated by 20 Ca2+ pulses
|
blastocyst treated by 20 pulses
|
Gene expression data from mouse blastocyst treated by 20 pulses
|
| Sample_geo_accession | GSM296819
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296819/suppl/GSM296819.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296820 | GPL1261 |
|
blastocyst treated by 20 pulses, replicate 2
|
blastocyst treated by 20 Ca2+ pulses
|
blastocyst treated by 20 pulses
|
Gene expression data from mouse blastocyst treated by 20 pulses
|
| Sample_geo_accession | GSM296820
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296820/suppl/GSM296820.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296821 | GPL1261 |
|
blastocyst treated by 20 pulses, replicate 4
|
blastocyst treated by 20 Ca2+ pulses
|
blastocyst treated by 20 pulses
|
Gene expression data from mouse blastocyst treated by 20 pulses
|
| Sample_geo_accession | GSM296821
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296821/suppl/GSM296821.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296822 | GPL1261 |
|
blastocyst cultured by Ca free medium, replicate 1
|
blastocyst cultured in Ca2+ free medium
|
gene expression of blastocyst cultured by Ca free medium
|
Gene expression data from mouse blastocyst cultured in Ca free medium
|
| Sample_geo_accession | GSM296822
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296822/suppl/GSM296822.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296823 | GPL1261 |
|
blastocyst cultured by Ca free medium, replicate 2
|
blastocyst cultured in Ca2+ free medium
|
gene expression of blastocyst cultured by Ca free medium
|
Gene expression data from mouse blastocyst cultured in Ca free medium
|
| Sample_geo_accession | GSM296823
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296823/suppl/GSM296823.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296824 | GPL1261 |
|
blastocyst cultured by Ca free medium, replicate 3
|
blastocyst cultured in Ca2+ free medium
|
gene expression of blastocyst cultured by Ca free medium
|
Gene expression data from mouse blastocyst cultured in Ca free medium
|
| Sample_geo_accession | GSM296824
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296824/suppl/GSM296824.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
|
GSM296825 | GPL1261 |
|
blastocyst cultured by Ca free medium, replicate 4
|
blastocyst cultured in Ca2+ free medium
|
gene expression of blastocyst cultured by Ca free medium
|
Gene expression data from mouse blastocyst cultured in Ca free medium
|
| Sample_geo_accession | GSM296825
| | Sample_status | Public on Jun 07 2008
| | Sample_submission_date | Jun 04 2008
| | Sample_last_update_date | Aug 18 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted and purified using an Picopure kit (Arcturus).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
| | Sample_hyb_protocol | cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Hua,,Pan
| | Sample_contact_email | huapan@sas.upenn.edu
| | Sample_contact_department | Department of Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 415 S University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM296nnn/GSM296825/suppl/GSM296825.cel.gz
| | Sample_series_id | GSE11687
| | Sample_data_row_count | 45101
| | |
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