Search results for the GEO ID: GSE11842  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM299114 | GPL1355 |
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F3-Control Ventral Prostate, replica 1
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whole ventral prostate from control F3 generation, 180-day-old male rat
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whole ventral prostate from control F3 generation, 180-day-old male rat
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Gene expression data for ventral prostate of F3 control 180-day-old rats
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| Sample_geo_accession | GSM299114
| | Sample_status | Public on Jun 20 2008
| | Sample_submission_date | Jun 20 2008
| | Sample_last_update_date | Jun 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Sprague-Dawley pregnant rats were given intraperitoneal injections of vehicle (DMSO) from pregnancy day E8 to E14. Offsprings from above (F0 generation animals) were used for sequential breeding to obtain generations F1, F2, and F3. Tissue from F3 rats was used in the experiment.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Several ventral prostates from animals with the same treatment were pooled to make each RNA sample. RNA was extracted using the Trizol reagent according to manufacturers instructions (Sigma, St. Louis, MO).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix procedures
| | Sample_hyb_protocol | standard Affymetrix procedure
| | Sample_scan_protocol | chips were scanned using Affimetrix Gene Chip Scanner 3000
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software using default normalization method. Target signal was set to 125. MAS-5 preprocessing was used.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,K,Skinner
| | Sample_contact_email | skinner@mail.wsu.edu
| | Sample_contact_department | SBS
| | Sample_contact_institute | WSU
| | Sample_contact_address | Abelson 507
| | Sample_contact_city | Pullman
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 99163
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM299nnn/GSM299114/suppl/GSM299114.CEL.gz
| | Sample_series_id | GSE11842
| | Sample_data_row_count | 31099
| | |
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GSM299115 | GPL1355 |
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F3-Control Ventral Prostate, replica 2
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whole ventral prostate from control F3 generation, 180-day-old male rat
|
whole ventral prostate from control F3 generation1, 180-day-old male rat
|
Gene expression data for ventral prostate of F3 control 180-day-old rats
|
| Sample_geo_accession | GSM299115
| | Sample_status | Public on Jun 20 2008
| | Sample_submission_date | Jun 20 2008
| | Sample_last_update_date | Jun 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Sprague-Dawley pregnant rats were given intraperitoneal injections of vehicle (DMSO) from pregnancy day E8 to E14. Offsprings from above (F0 generation animals) were used for sequential breeding to obtain generations F1, F2, and F3. Tissue from F3 rats was used in the experiment.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Several ventral prostates from animals with the same treatment were pooled to make each RNA sample. RNA was extracted using the Trizol reagent according to manufacturers instructions (Sigma, St. Louis, MO).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix procedures
| | Sample_hyb_protocol | standard Affymetrix procedure
| | Sample_scan_protocol | chips were scanned using Affymetrix GeneArray Scanner G2500A
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software using default normalization method. Target signal was set to 125. MAS-5 preprocessing was used.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,K,Skinner
| | Sample_contact_email | skinner@mail.wsu.edu
| | Sample_contact_department | SBS
| | Sample_contact_institute | WSU
| | Sample_contact_address | Abelson 507
| | Sample_contact_city | Pullman
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 99163
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM299nnn/GSM299115/suppl/GSM299115.CEL.gz
| | Sample_series_id | GSE11842
| | Sample_data_row_count | 31099
| | |
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GSM299116 | GPL1355 |
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F3-Vinclozolin Ventral Prostate, replica 1
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whole ventral prostate from vinclozolin treated F3 generation, 180-day-old male rat
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whole ventral prostate from vinclozolin treated F3 generation, 180-day-old male rat
|
Gene expression data for ventral prostate of F3 Vinclozolin treated 180-day-old rats
|
| Sample_geo_accession | GSM299116
| | Sample_status | Public on Jun 20 2008
| | Sample_submission_date | Jun 20 2008
| | Sample_last_update_date | Jun 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Sprague-Dawley pregnant rats were given intraperitoneal injections of vehicle (DMSO) from pregnancy day E8 to E14. Offsprings from above (F0 generation animals) were used for sequential breeding to obtain generations F1, F2, and F3. Tissue from F3 rats was used in the experiment.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Several ventral prostates from animals with the same treatment were pooled to make each RNA sample. RNA was extracted using the Trizol reagent according to manufacturers instructions (Sigma, St. Louis, MO).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix procedures
| | Sample_hyb_protocol | standard Affymetrix procedure
| | Sample_scan_protocol | chips were scanned using Affymetrix GeneArray Scanner G2500A
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software using default normalization method. Target signal was set to 125. MAS-5 preprocessing was used.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,K,Skinner
| | Sample_contact_email | skinner@mail.wsu.edu
| | Sample_contact_department | SBS
| | Sample_contact_institute | WSU
| | Sample_contact_address | Abelson 507
| | Sample_contact_city | Pullman
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 99163
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM299nnn/GSM299116/suppl/GSM299116.CEL.gz
| | Sample_series_id | GSE11842
| | Sample_data_row_count | 31099
| | |
|
GSM299117 | GPL1355 |
|
F3-Vinclozolin Ventral Prostate, replica 2
|
whole ventral prostate from vinclozolin treated F3 generation, 180-day-old male rat
|
whole ventral prostate from vinclozolin treated F3 generation, 180-day-old male rat
|
Gene expression data for ventral prostate of F3 Vinclozolin treated 180-day-old rats
|
| Sample_geo_accession | GSM299117
| | Sample_status | Public on Jun 20 2008
| | Sample_submission_date | Jun 20 2008
| | Sample_last_update_date | Jun 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Sprague-Dawley pregnant rats were given intraperitoneal injections of vehicle (DMSO) from pregnancy day E8 to E14. Offsprings from above (F0 generation animals) were used for sequential breeding to obtain generations F1, F2, and F3. Tissue from F3 rats was used in the experiment.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Several ventral prostates from animals with the same treatment were pooled to make each RNA sample. RNA was extracted using the Trizol reagent according to manufacturers instructions (Sigma, St. Louis, MO).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix procedures
| | Sample_hyb_protocol | standard Affymetrix procedure
| | Sample_scan_protocol | chips were scanned using Affymetrix GeneArray Scanner G2500A
| | Sample_data_processing | The data were analyzed with Affymetrix GeneChip Operating Software using default normalization method. Target signal was set to 125. MAS-5 preprocessing was used.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,K,Skinner
| | Sample_contact_email | skinner@mail.wsu.edu
| | Sample_contact_department | SBS
| | Sample_contact_institute | WSU
| | Sample_contact_address | Abelson 507
| | Sample_contact_city | Pullman
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 99163
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM299nnn/GSM299117/suppl/GSM299117.CEL.gz
| | Sample_series_id | GSE11842
| | Sample_data_row_count | 31099
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