Search results for the GEO ID: GSE11898  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM300667 | GPL1261 |
|
lipofectamine at 6h-1
|
primary mesangial cells, control, lipofectamine at 6h-1
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300667
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300667/suppl/GSM300667.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300668 | GPL1261 |
|
lipofectamine at 6h-2
|
primary mesangial cells, control, lipofectamine at 6h-2
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300668
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300668/suppl/GSM300668.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300669 | GPL1261 |
|
lipofectamine at 6h-3
|
primary mesangial cells, control, lipofectamine at 6h-3
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300669
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300669/suppl/GSM300669.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300670 | GPL1261 |
|
Non-CpG DNA at 6h-1
|
primary mesangial cells, Non-CpG DNA at 6h-1
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300670
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300670/suppl/GSM300670.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300671 | GPL1261 |
|
Non-CpG DNA at 6h-2
|
primary mesangial cells, Non-CpG DNA at 6h-2
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300671
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300671/suppl/GSM300671.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300672 | GPL1261 |
|
Non-CpG DNA at 6h-3
|
primary mesangial cells, Non-CpG DNA at 6h-3
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300672
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300672/suppl/GSM300672.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300673 | GPL1261 |
|
3P-RNA at 6h-1
|
primary mesangial cells, 3P-RNA at 6h-1
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300673
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300673/suppl/GSM300673.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300674 | GPL1261 |
|
3P-RNA at 6h-2
|
primary mesangial cells, 3P-RNA at 6h-2
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300674
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300674/suppl/GSM300674.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
|
GSM300675 | GPL1261 |
|
3P-RNA at 6h-3
|
primary mesangial cells, 3P-RNA at 6h-3
|
Genotype: C57Bl/6
Age: 8-10 week old
|
Gene expression data from primary mesangial cells that are stimulated with Non-CpG DNA and 3P-RNA
|
| Sample_geo_accession | GSM300675
| | Sample_status | Public on Jun 27 2008
| | Sample_submission_date | Jun 26 2008
| | Sample_last_update_date | Jun 26 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | primary mesangial cells treated with non CpG DNA and 3P-RNA for 6 hours
| | Sample_growth_protocol_ch1 | Primary mesangial cells were isolated from kidney and grow them in RPMI 1640 containing 20% FCS, 1% ITS
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was prepared using RNAeasy Mini Kit according manufacturer-suggested protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix Expresssion Analysis Technical Manual from 6 µg total RNA
| | Sample_hyb_protocol | Following fragmentation, we used standard Affymetrix procedures for hybridization
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | The data were analyzed with RMA Express version 1.0 beta 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ramanjaneyulu,,Allam
| | Sample_contact_email | Allam.Ramanjangyulu@med.uni-muenchen.de
| | Sample_contact_department | Medizinische Poliklinik-Innenstadt
| | Sample_contact_institute | Klinikum der Universität München
| | Sample_contact_address | Schillerstr. 42
| | Sample_contact_city | munich
| | Sample_contact_zip/postal_code | 80336
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM300nnn/GSM300675/suppl/GSM300675.CEL.gz
| | Sample_series_id | GSE11898
| | Sample_data_row_count | 45101
| | |
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