Search results for the GEO ID: GSE11973  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM303237 | GPL1261 |
|
Neutrophils cultured from miR-223 null mouse bone marrow - Rep 1
|
Neutrophils
|
mRNA profiling of neutrophils in vitro cultured from miR-223 null mouse bone marrow - Rep 1
|
mRNA expression profile comparison between wild-type cultured murine neutrophils versus miR-223 null cultured murine neutrophils
|
| Sample_geo_accession | GSM303237
| | Sample_status | Public on Jul 30 2008
| | Sample_submission_date | Jul 02 2008
| | Sample_last_update_date | Jul 16 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Live neutrophils were isolated using MACS.
| | Sample_growth_protocol_ch1 | BM-progenitors were cultured in SILAC-IMDM with G-CSF and SCF for 6 days and subsequent culture for 42 hours without SCF. During the time, maturation to neutrophils occurs.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Tri Reagent (Ambion) followed by RNeasy Plus (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affy Standard labeling Protocol
| | Sample_hyb_protocol | Affy Standard Hyb Protocol
| | Sample_scan_protocol | Affy Scanner
| | Sample_data_processing | GCOS and RMAExpress software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Whitehead,,Institute
| | Sample_contact_email | sgupta@wi.mit.edu
| | Sample_contact_phone | 617-324-0339
| | Sample_contact_fax | 617-258-8896
| | Sample_contact_department | Genome Technology Core
| | Sample_contact_institute | Whitehead Institute
| | Sample_contact_address | 9 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02141
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://wi.mit.edu/cmt/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM303nnn/GSM303237/suppl/GSM303237.CEL.gz
| | Sample_series_id | GSE11973
| | Sample_series_id | GSE12075
| | Sample_data_row_count | 45101
| | |
|
GSM303245 | GPL1261 |
|
Neutrophils cultured from miR-223 null mouse bone marrow - Rep 2
|
Neutrophils
|
mRNA profiling of neutrophils in vitro cultured from miR-223 null mouse bone marrow - Rep2
|
mRNA expression profile comparison between wild-type cultured murine neutrophils versus miR-223 null cultured murine neutrophils
|
| Sample_geo_accession | GSM303245
| | Sample_status | Public on Jul 30 2008
| | Sample_submission_date | Jul 02 2008
| | Sample_last_update_date | Jul 16 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Live neutrophils were isolated using MACS.
| | Sample_growth_protocol_ch1 | BM-progenitors were cultured in SILAC-IMDM with G-CSF and SCF for 6 days and subsequent culture for 42 hours without SCF. During the time, maturation to neutrophils occurs.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Tri Reagent (Ambion) followed by RNeasy Plus (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affy Standard labeling Protocol
| | Sample_hyb_protocol | Affy Standard Hyb Protocol
| | Sample_scan_protocol | Affy Scanner
| | Sample_data_processing | GCOS and RMAExpress software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Whitehead,,Institute
| | Sample_contact_email | sgupta@wi.mit.edu
| | Sample_contact_phone | 617-324-0339
| | Sample_contact_fax | 617-258-8896
| | Sample_contact_department | Genome Technology Core
| | Sample_contact_institute | Whitehead Institute
| | Sample_contact_address | 9 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02141
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://wi.mit.edu/cmt/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM303nnn/GSM303245/suppl/GSM303245.CEL.gz
| | Sample_series_id | GSE11973
| | Sample_series_id | GSE12075
| | Sample_data_row_count | 45101
| | |
|
GSM303256 | GPL1261 |
|
Neutrophils cultured from miR-223 null mouse bone marrow - Rep 3
|
Neutrophils
|
mRNA profiling of neutrophils in vitro cultured from miR-223 null mouse bone marrow - Rep3
|
mRNA expression profile comparison between wild-type cultured murine neutrophils versus miR-223 null cultured murine neutrophils
|
| Sample_geo_accession | GSM303256
| | Sample_status | Public on Jul 30 2008
| | Sample_submission_date | Jul 02 2008
| | Sample_last_update_date | Jul 16 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Live neutrophils were isolated using MACS.
| | Sample_growth_protocol_ch1 | BM-progenitors were cultured in SILAC-IMDM with G-CSF and SCF for 6 days and subsequent culture for 42 hours without SCF. During the time, maturation to neutrophils occurs.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Tri Reagent (Ambion) followed by RNeasy Plus (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affy Standard labeling Protocol
| | Sample_hyb_protocol | Affy Standard Hyb Protocol
| | Sample_scan_protocol | Affy Scanner
| | Sample_data_processing | GCOS and RMAExpress software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Whitehead,,Institute
| | Sample_contact_email | sgupta@wi.mit.edu
| | Sample_contact_phone | 617-324-0339
| | Sample_contact_fax | 617-258-8896
| | Sample_contact_department | Genome Technology Core
| | Sample_contact_institute | Whitehead Institute
| | Sample_contact_address | 9 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02141
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://wi.mit.edu/cmt/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM303nnn/GSM303256/suppl/GSM303256.CEL.gz
| | Sample_series_id | GSE11973
| | Sample_series_id | GSE12075
| | Sample_data_row_count | 45101
| | |
|
GSM303257 | GPL1261 |
|
Neutrophils cultured from wild-type mouse bone marrow - Rep 1
|
neutrophils
|
mRNA profiling of neutrophils in vitro cultured from wild-type mouse bone marrow - Rep 1
|
mRNA expression profile comparison between wild-type cultured murine neutrophils versus miR-223 null cultured murine neutrophils
|
| Sample_geo_accession | GSM303257
| | Sample_status | Public on Jul 30 2008
| | Sample_submission_date | Jul 02 2008
| | Sample_last_update_date | Apr 10 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Live neutrophils were isolated using MACS.
| | Sample_growth_protocol_ch1 | BM-progenitors were cultured in SILAC-IMDM with G-CSF and SCF for 6 days and subsequent culture for 42 hours without SCF. During the time, maturation to neutrophils occurs.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Tri Reagent (Ambion) followed by RNeasy Plus (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affy Standard labeling Protocol
| | Sample_hyb_protocol | Affy Standard Hyb Protocol
| | Sample_scan_protocol | Affy Scanner
| | Sample_data_processing | GCOS and RMAExpress software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Whitehead,,Institute
| | Sample_contact_email | sgupta@wi.mit.edu
| | Sample_contact_phone | 617-324-0339
| | Sample_contact_fax | 617-258-8896
| | Sample_contact_department | Genome Technology Core
| | Sample_contact_institute | Whitehead Institute
| | Sample_contact_address | 9 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02141
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://wi.mit.edu/cmt/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM303nnn/GSM303257/suppl/GSM303257.CEL.gz
| | Sample_relation | Reanalyzed by: GSE45704
| | Sample_series_id | GSE11973
| | Sample_series_id | GSE12075
| | Sample_data_row_count | 45101
| | |
|
GSM303268 | GPL1261 |
|
Neutrophils cultured from wild-type mouse bone marrow - Rep 2
|
Neutrophils
|
mRNA profiling of neutrophils in vitro cultured from wild-type mouse bone marrow - Rep 2
|
mRNA expression profile comparison between wild-type cultured murine neutrophils versus miR-223 null cultured murine neutrophils
|
| Sample_geo_accession | GSM303268
| | Sample_status | Public on Jul 30 2008
| | Sample_submission_date | Jul 02 2008
| | Sample_last_update_date | Apr 10 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Live neutrophils were isolated using MACS.
| | Sample_growth_protocol_ch1 | BM-progenitors were cultured in SILAC-IMDM with G-CSF and SCF for 6 days and subsequent culture for 42 hours without SCF. During the time, maturation to neutrophils occurs.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Tri Reagent (Ambion) followed by RNeasy Plus (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affy Standard labeling Protocol
| | Sample_hyb_protocol | Affy Standard Hyb Protocol
| | Sample_scan_protocol | Affy Scanner
| | Sample_data_processing | GCOS and RMAExpress software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Whitehead,,Institute
| | Sample_contact_email | sgupta@wi.mit.edu
| | Sample_contact_phone | 617-324-0339
| | Sample_contact_fax | 617-258-8896
| | Sample_contact_department | Genome Technology Core
| | Sample_contact_institute | Whitehead Institute
| | Sample_contact_address | 9 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02141
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://wi.mit.edu/cmt/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM303nnn/GSM303268/suppl/GSM303268.CEL.gz
| | Sample_relation | Reanalyzed by: GSE45704
| | Sample_series_id | GSE11973
| | Sample_series_id | GSE12075
| | Sample_data_row_count | 45101
| | |
|
GSM303276 | GPL1261 |
|
Neutrophils cultured from wild-type mouse bone marrow - Rep 3
|
Neutrophils
|
mRNA profiling of neutrophils in vitro cultured from wild-type mouse bone marrow - Rep 3
|
mRNA expression profile comparison between wild-type cultured murine neutrophils versus miR-223 null cultured murine neutrophils
|
| Sample_geo_accession | GSM303276
| | Sample_status | Public on Jul 30 2008
| | Sample_submission_date | Jul 02 2008
| | Sample_last_update_date | Apr 10 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Live neutrophils were isolated using MACS.
| | Sample_growth_protocol_ch1 | BM-progenitors were cultured in SILAC-IMDM with G-CSF and SCF for 6 days and subsequent culture for 42 hours without SCF. During the time, maturation to neutrophils occurs.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Tri Reagent (Ambion) followed by RNeasy Plus (Qiagen)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affy Standard labeling Protocol
| | Sample_hyb_protocol | Affy Standard Hyb Protocol
| | Sample_scan_protocol | Affy Scanner
| | Sample_data_processing | GCOS and RMAExpress software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Whitehead,,Institute
| | Sample_contact_email | sgupta@wi.mit.edu
| | Sample_contact_phone | 617-324-0339
| | Sample_contact_fax | 617-258-8896
| | Sample_contact_department | Genome Technology Core
| | Sample_contact_institute | Whitehead Institute
| | Sample_contact_address | 9 Cambridge Center
| | Sample_contact_city | Cambridge
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02141
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://wi.mit.edu/cmt/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM303nnn/GSM303276/suppl/GSM303276.CEL.gz
| | Sample_relation | Reanalyzed by: GSE45704
| | Sample_series_id | GSE11973
| | Sample_series_id | GSE12075
| | Sample_data_row_count | 45101
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
