Search results for the GEO ID: GSE12038  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM304286 | GPL1261 |
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Jejunum_wild type mouse
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Jejunum_wild type mouse
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Total RNA was isolated from jejunum of mice with XBP1+/+ genotype on mixed background
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unknown
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| Sample_geo_accession | GSM304286
| | Sample_status | Public on Jul 10 2008
| | Sample_submission_date | Jul 08 2008
| | Sample_last_update_date | Jul 09 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from intestinal scraping samples by Trozol
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was synthesized from total RNA by using SuperScript II, Invitrogen Life Technologies. An in-vitro transcription (IVT) reaction was then done to produce biotin-labeled cRNA from the cDNA. The cRNA was fragmented before hybridization.
| | Sample_hyb_protocol | 16 h hybridization following the standard protocol provided by Affymetrix
| | Sample_scan_protocol | unknown
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ann-Hwee,,Lee
| | Sample_contact_email | ahlee@hsph.harvard.edu
| | Sample_contact_institute | Harvard School of public health
| | Sample_contact_address | 651 Huntington Ave, FXB/205
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM304nnn/GSM304286/suppl/GSM304286.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM304nnn/GSM304286/suppl/GSM304286.CHP.gz
| | Sample_series_id | GSE12038
| | Sample_data_row_count | 45101
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GSM304287 | GPL1261 |
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Jejunum_XBP1 knock-out mouse
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Jejunum_XBP1 knock-out mouse
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Total RNA was isolated from jejunum of mice with XBP1flox/flox;Villin-cre genotype (XBP1-/-) on mixed background
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unknown
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| Sample_geo_accession | GSM304287
| | Sample_status | Public on Jul 10 2008
| | Sample_submission_date | Jul 08 2008
| | Sample_last_update_date | Jul 09 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from intestinal scraping samples by Trozol
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Double-stranded cDNA was synthesized from total RNA by using SuperScript II, Invitrogen Life Technologies. An in-vitro transcription (IVT) reaction was then done to produce biotin-labeled cRNA from the cDNA. The cRNA was fragmented before hybridization.
| | Sample_hyb_protocol | 16 h hybridization following the standard protocol provided by Affymetrix
| | Sample_scan_protocol | unknown
| | Sample_data_processing | MAS5
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ann-Hwee,,Lee
| | Sample_contact_email | ahlee@hsph.harvard.edu
| | Sample_contact_institute | Harvard School of public health
| | Sample_contact_address | 651 Huntington Ave, FXB/205
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM304nnn/GSM304287/suppl/GSM304287.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM304nnn/GSM304287/suppl/GSM304287.CHP.gz
| | Sample_series_id | GSE12038
| | Sample_data_row_count | 45101
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