Search results for the GEO ID: GSE12132  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM305789 | GPL1355 |
|
Mammary lactating standardG M216S
|
Rattus norvegicus
|
subtype: mammary_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305789
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305789/suppl/GSM305789.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305790 | GPL1355 |
|
Liver lactating standardG L216S
|
Rattus norvegicus
|
subtype: liver_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305790
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305790/suppl/GSM305790.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305791 | GPL1355 |
|
Adipose lactating standardG A216S
|
Rattus norvegicus
|
subtype: adipose_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305791
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305791/suppl/GSM305791.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305792 | GPL1355 |
|
Adipose lactating hyperG A210H
|
Rattus norvegicus
|
subtype: adipose_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305792
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305792/suppl/GSM305792.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305793 | GPL1355 |
|
Liver lactating hyperG L210H
|
Rattus norvegicus
|
subtype: liver_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305793
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305793/suppl/GSM305793.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305794 | GPL1355 |
|
Mammary lactating hyperG M210H
|
Rattus norvegicus
|
subtype: mammary_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305794
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305794/suppl/GSM305794.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305795 | GPL1355 |
|
Mammary pregnant standardG M52S
|
Rattus norvegicus
|
subtype: mammary_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305795
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305795/suppl/GSM305795.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305796 | GPL1355 |
|
Liver pregnant standardG L52S
|
Rattus norvegicus
|
subtype: liver_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305796
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305796/suppl/GSM305796.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305797 | GPL1355 |
|
Adipose pregnant standardG A52S
|
Rattus norvegicus
|
subtype: adipose_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305797
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305797/suppl/GSM305797.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305798 | GPL1355 |
|
Mammary pregnant hyperG M59H
|
Rattus norvegicus
|
subtype: mammary_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305798
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305798/suppl/GSM305798.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305799 | GPL1355 |
|
Liver pregnant hyperG L59H
|
Rattus norvegicus
|
subtype: liver_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305799
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305799/suppl/GSM305799.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305800 | GPL1355 |
|
Adipose pregnant hyperG A59H
|
Rattus norvegicus
|
subtype: adipose_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305800
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305800/suppl/GSM305800.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305801 | GPL1355 |
|
Mammary pregnant standardG M42S
|
Rattus norvegicus
|
subtype: mammary_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305801
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305801/suppl/GSM305801.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305802 | GPL1355 |
|
Liver pregnant standardG L42S
|
Rattus norvegicus
|
subtype: liver_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305802
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305802/suppl/GSM305802.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305803 | GPL1355 |
|
Adipose pregnant standardG A42S
|
Rattus norvegicus
|
subtype: adipose_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305803
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305803/suppl/GSM305803.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305804 | GPL1355 |
|
Mammary pregnant hyperG M55H
|
Rattus norvegicus
|
subtype: mammary_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305804
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305804/suppl/GSM305804.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305805 | GPL1355 |
|
Liver pregnant hyperG L55H
|
Rattus norvegicus
|
subtype: liver_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305805
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305805/suppl/GSM305805.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305806 | GPL1355 |
|
Adipose pregnant hyperG A55H
|
Rattus norvegicus
|
subtype: adipose_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305806
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305806/suppl/GSM305806.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305807 | GPL1355 |
|
Mammary pregnant standardG M44S
|
Rattus norvegicus
|
subtype: mammary_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305807
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305807/suppl/GSM305807.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305808 | GPL1355 |
|
Liver pregnant standardG L44S
|
Rattus norvegicus
|
subtype: liver_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305808
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305808/suppl/GSM305808.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305809 | GPL1355 |
|
Adipose pregnant standardG A44S
|
Rattus norvegicus
|
subtype: adipose_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305809
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305809/suppl/GSM305809.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305810 | GPL1355 |
|
Mammary lactating standardG M201S
|
Rattus norvegicus
|
subtype: mammary_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305810
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305810/suppl/GSM305810.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305811 | GPL1355 |
|
Liver lactating standardG L201S
|
Rattus norvegicus
|
subtype: liver_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305811
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305811/suppl/GSM305811.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305812 | GPL1355 |
|
Adipose lactating standardG A201S
|
Rattus norvegicus
|
subtype: adipose_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305812
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305812/suppl/GSM305812.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305813 | GPL1355 |
|
Mammary pregnant hyperG M50H
|
Rattus norvegicus
|
subtype: mammary_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305813
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305813/suppl/GSM305813.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305814 | GPL1355 |
|
Liver pregnant hyperG L50H
|
Rattus norvegicus
|
subtype: liver_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305814
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305814/suppl/GSM305814.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305815 | GPL1355 |
|
Adipose pregnant hyperG A50H
|
Rattus norvegicus
|
subtype: adipose_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305815
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305815/suppl/GSM305815.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305816 | GPL1355 |
|
Mammary lactating hyperG M203H
|
Rattus norvegicus
|
subtype: mammary_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305816
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305816/suppl/GSM305816.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305817 | GPL1355 |
|
Liver lactating hyperG L203H
|
Rattus norvegicus
|
subtype: liver_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305817
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305817/suppl/GSM305817.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305818 | GPL1355 |
|
Adipose lactating hyperG A203H
|
Rattus norvegicus
|
subtype: adipose_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305818
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305818/suppl/GSM305818.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305819 | GPL1355 |
|
Mammary pregnant hyperG M56H
|
Rattus norvegicus
|
subtype: mammary_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305819
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305819/suppl/GSM305819.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305820 | GPL1355 |
|
Liver pregnant hyperG L56H
|
Rattus norvegicus
|
subtype: liver_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305820
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305820/suppl/GSM305820.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305821 | GPL1355 |
|
Adipose pregnant hyperG A56H
|
Rattus norvegicus
|
subtype: adipose_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305821
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305821/suppl/GSM305821.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305822 | GPL1355 |
|
Mammary lactating hyperG M212H
|
Rattus norvegicus
|
subtype: mammary_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305822
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305822/suppl/GSM305822.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305823 | GPL1355 |
|
Liver lactating hyperG L212H
|
Rattus norvegicus
|
subtype: liver_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305823
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305823/suppl/GSM305823.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305824 | GPL1355 |
|
Adipose lactating hyperG A212H
|
Rattus norvegicus
|
subtype: adipose_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305824
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305824/suppl/GSM305824.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305825 | GPL1355 |
|
Mammary pregnant standardG M57S
|
Rattus norvegicus
|
subtype: mammary_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305825
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305825/suppl/GSM305825.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305826 | GPL1355 |
|
Liver pregnant standardG L57S
|
Rattus norvegicus
|
subtype: liver_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305826
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305826/suppl/GSM305826.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305827 | GPL1355 |
|
Adipose pregnant standardG A57S
|
Rattus norvegicus
|
subtype: adipose_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305827
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305827/suppl/GSM305827.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305828 | GPL1355 |
|
Mammary lactating standardG M219S
|
Rattus norvegicus
|
subtype: mammary_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305828
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305828/suppl/GSM305828.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305829 | GPL1355 |
|
Liver lactating standardG L219S
|
Rattus norvegicus
|
subtype: liver_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305829
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305829/suppl/GSM305829.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305830 | GPL1355 |
|
Adipose lactating standardG A219S
|
Rattus norvegicus
|
subtype: adipose_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305830
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305830/suppl/GSM305830.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305831 | GPL1355 |
|
Mammary pregnant hyperG M60H
|
Rattus norvegicus
|
subtype: mammary_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305831
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305831/suppl/GSM305831.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305832 | GPL1355 |
|
Liver pregnant hyperG L60H
|
Rattus norvegicus
|
subtype: liver_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305832
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305832/suppl/GSM305832.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305833 | GPL1355 |
|
Adipose pregnant hyperG A60H
|
Rattus norvegicus
|
subtype: adipose_preg_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305833
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305833/suppl/GSM305833.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305834 | GPL1355 |
|
Mammary lactating hyperG M217H
|
Rattus norvegicus
|
subtype: mammary_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305834
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305834/suppl/GSM305834.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305835 | GPL1355 |
|
Liver lactating hyperG L217H
|
Rattus norvegicus
|
subtype: liver_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305835
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305835/suppl/GSM305835.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305836 | GPL1355 |
|
Adipose lactating hyperG A217H
|
Rattus norvegicus
|
subtype: adipose_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305836
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305836/suppl/GSM305836.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305837 | GPL1355 |
|
Mammary lactating standardG M214S
|
Rattus norvegicus
|
subtype: mammary_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305837
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305837/suppl/GSM305837.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305838 | GPL1355 |
|
Liver lactating standardG L214S
|
Rattus norvegicus
|
subtype: liver_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305838
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305838/suppl/GSM305838.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305839 | GPL1355 |
|
Adipose lactating standardG A214S
|
Rattus norvegicus
|
subtype: adipose_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305839
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305839/suppl/GSM305839.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305840 | GPL1355 |
|
Mammary lactating hyperG M206H
|
Rattus norvegicus
|
subtype: mammary_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305840
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305840/suppl/GSM305840.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305841 | GPL1355 |
|
Liver lactating hyperG L206H
|
Rattus norvegicus
|
subtype: liver_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305841
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305841/suppl/GSM305841.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305842 | GPL1355 |
|
Adipose lactating hyperG A206H
|
Rattus norvegicus
|
subtype: adipose_lac_hyperG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305842
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305842/suppl/GSM305842.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305843 | GPL1355 |
|
Liver pregnant standardG L48S
|
Rattus norvegicus
|
subtype: liver_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305843
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305843/suppl/GSM305843.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305844 | GPL1355 |
|
Adipose pregnant standardG A48S
|
Rattus norvegicus
|
subtype: adipose_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305844
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305844/suppl/GSM305844.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305845 | GPL1355 |
|
Mammary lactating standardG M202S
|
Rattus norvegicus
|
subtype: mammary_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305845
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305845/suppl/GSM305845.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305846 | GPL1355 |
|
Liver lactating standardG L202S
|
Rattus norvegicus
|
subtype: liver_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305846
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305846/suppl/GSM305846.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305847 | GPL1355 |
|
Adipose lactating standardG A202S
|
Rattus norvegicus
|
subtype: adipose_lac_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305847
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305847/suppl/GSM305847.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305848 | GPL1355 |
|
Mammary pregnant standardG M48S
|
Rattus norvegicus
|
subtype: mammary_preg_standardG
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305848
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305848/suppl/GSM305848.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305849 | GPL1355 |
|
Mammary pregnant microGravity FLTC
|
Rattus norvegicus
|
subtype: mammary_preg_microGravity
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305849
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305849/suppl/GSM305849.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305850 | GPL1355 |
|
Mammary pregnant microGravity control flight FDSD
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_flight
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305850
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305850/suppl/GSM305850.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305851 | GPL1355 |
|
Mammary pregnant microGravity control vivarium VIVA
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_vivarium
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305851
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305851/suppl/GSM305851.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305852 | GPL1355 |
|
Mammary pregnant microGravity FLTB
|
Rattus norvegicus
|
subtype: mammary_preg_microGravity
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305852
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305852/suppl/GSM305852.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305853 | GPL1355 |
|
Mammary pregnant microGravity control flight FDSC
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_flight
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305853
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305853/suppl/GSM305853.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305854 | GPL1355 |
|
Mammary pregnant microGravity control vivarium VIVD
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_vivarium
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305854
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305854/suppl/GSM305854.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305855 | GPL1355 |
|
Mammary pregnant microGravity FLTA
|
Rattus norvegicus
|
subtype: mammary_preg_microGravity
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305855
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305855/suppl/GSM305855.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305856 | GPL1355 |
|
Mammary pregnant microGravity control flight FDSB
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_flight
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305856
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305856/suppl/GSM305856.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305857 | GPL1355 |
|
Mammary pregnant microGravity control vivarium VIVC
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_vivarium
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305857
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305857/suppl/GSM305857.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305858 | GPL1355 |
|
Mammary pregnant microGravity FLTD
|
Rattus norvegicus
|
subtype: mammary_preg_microGravity
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305858
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305858/suppl/GSM305858.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305859 | GPL1355 |
|
Mammary pregnant microGravity control flight FDSA
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_flight
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305859
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305859/suppl/GSM305859.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
GSM305860 | GPL1355 |
|
Mammary pregnant microGravity control vivarium VIVB
|
Rattus norvegicus
|
subtype: mammary_preg_microGravityControl_vivarium
|
Gene expression data from three tissue types within rats in lactation/pregnancy and micro/standard/hyper gravity.
|
| Sample_geo_accession | GSM305860
| | Sample_status | Public on Nov 23 2009
| | Sample_submission_date | Jul 16 2008
| | Sample_last_update_date | Nov 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated with TRIzol (Invitrogen) for mammary and liver; RNeasy Lipid (QIAGEN) for adipose.
| | Sample_label_ch1 | R-Phycoerythrin Streptavidin (SAPE), from Molecular Probes, 1 mg/ml ( we use 6 ul per reaction )
| | Sample_label_protocol_ch1 | 25ng total RNA for cDNA synthesis, amplification and biotin labeling with NuGEN Ovation Biotin System.
| | Sample_hyb_protocol | 2.2ug of biotin labeled, fragmented cDNA hybridized to Rat 230 2.0 Affy GeneChips.
| | Sample_scan_protocol | Affymetrix Genearray scanner 3000, with 7G upgrade
| | Sample_data_processing | Data analyzed with RMA and MAANOVA.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Karl,,Dykema
| | Sample_contact_laboratory | Lab of Computational Biology
| | Sample_contact_institute | Van Andel Institute
| | Sample_contact_address | 333 Bostwick Ave. NE
| | Sample_contact_city | Grand Rapids
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 49503
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305860/suppl/GSM305860.CEL.gz
| | Sample_series_id | GSE12132
| | Sample_data_row_count | 31042
| | |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
Enter the group name here: |
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