Search results for the GEO ID: GSE12134 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM305788 | GPL1261 |
|
Cortex caudal E14 AP2gamma k.o. animal 01
|
Cortex E14 (caudal) from knock-out mice
|
C57Bl/6J background. Ap2gamma -/- (k.o.). Exon 5 of AP2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305788
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305788/suppl/GSM305788.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305861 | GPL1261 |
|
Cortex caudal E14 AP2gamma k.o. animal 13
|
Cortex E14 (caudal) from knock-out mice
|
C57Bl/6J background. Mice were Ap2gamma -/- (k.o.). Exon 5 of Ap2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305861
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305861/suppl/GSM305861.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305862 | GPL1261 |
|
Cortex rostral E14 AP2gamma k.o. animal 07
|
Cortex E14 (rostral) from knock-out mice
|
C57Bl/6J background. Mice were Ap2gamma -/- (k.o.). Exon 5 of Ap2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305862
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305862/suppl/GSM305862.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305863 | GPL1261 |
|
Cortex rostral E14 AP2gamma k.o. animal 08
|
Cortex E14 (rostral) from knock-out mice
|
C57Bl/6J background. Mice were Ap2gamma -/- (k.o.). Exon 5 of Ap2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305863
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305863/suppl/GSM305863.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305864 | GPL1261 |
|
Cortex rostral E14 AP2gamma k.o. animal 15
|
Cortex E14 (rostral) from knock-out mice
|
C57Bl/6J background. Mice were Ap2gamma -/- (k.o.). Exon 5 of Ap2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305864
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305864/suppl/GSM305864.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305865 | GPL1261 |
|
Cortex caudal E14 wt animal 04
|
Cortex E14 (caudal) from wild type mice
|
C57Bl/6J background. wt mice crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305865
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305865/suppl/GSM305865.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305866 | GPL1261 |
|
Cortex caudal E14 wt animal 06
|
Cortex E14 (caudal) from wild type mice
|
C57Bl/6J background. wt mice crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305866
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305866/suppl/GSM305866.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305867 | GPL1261 |
|
Cortex caudal E14 wt animal 14
|
Cortex E14 (caudal) from wild type mice
|
C57Bl/6J background. wt mice crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305867
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305867/suppl/GSM305867.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305868 | GPL1261 |
|
Cortex rostral E14 wt animal 10
|
Cortex E14 (rostral) from wild type mice
|
C57Bl/6J background. wt mice crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305868
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305868/suppl/GSM305868.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305869 | GPL1261 |
|
Cortex rostral E14 wt animal 12
|
Cortex E14 (rostral) from wild type mice
|
C57Bl/6J background. wt mice crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305869
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305869/suppl/GSM305869.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305870 | GPL1261 |
|
Cortex rostral E14 wt animal 16
|
Cortex E14 (rostral) from wild type mice
|
C57Bl/6J background. wt mice crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305870
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305870/suppl/GSM305870.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
GSM305871 | GPL1261 |
|
Cortex caudal E14 AP2gamma k.o. animal 02
|
Cortex E14 (caudal) from knock-out mice
|
C57Bl/6J background. Ap2gamma -/- (k.o.). Exon 5 of Ap2gamma was flanked by LoxP sites. Mice were crossed with Emx1::Cre knock-in mice.
|
400 ng of total RNA were used for amplification
|
Sample_geo_accession | GSM305871
| Sample_status | Public on Sep 22 2009
| Sample_submission_date | Jul 16 2008
| Sample_last_update_date | Sep 22 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) including DNase treatment
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | MessageAmp II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion)
| Sample_hyb_protocol | According to the Affymetrix expression protocol
| Sample_scan_protocol | According to the Affymetrix expression protocol
| Sample_data_processing | Normalized Mas5 data
| Sample_platform_id | GPL1261
| Sample_contact_name | Johannes,,Beckers
| Sample_contact_email | beckers@helmholtz-muenchen.de
| Sample_contact_department | Institute of Experimental Genetics
| Sample_contact_institute | Helmholtz Zentrum München
| Sample_contact_address | Ingolstaedter Landstr. 1
| Sample_contact_city | Neuherberg
| Sample_contact_state | Bavaria
| Sample_contact_zip/postal_code | 85764
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM305nnn/GSM305871/suppl/GSM305871.CEL.gz
| Sample_series_id | GSE12134
| Sample_data_row_count | 45101
| |
|
|
|
Make groups for comparisons |
(2 groups will be compared at a time) |
|
Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|