Search results for the GEO ID: GSE12155  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM306062 | GPL570 |
|
SG-83A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306062
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306062/suppl/GSM306062.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306063 | GPL570 |
|
SG-83B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306063
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306063/suppl/GSM306063.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306064 | GPL570 |
|
SG-84A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306064
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306064/suppl/GSM306064.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306065 | GPL570 |
|
SG-84B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306065
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306065/suppl/GSM306065.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306066 | GPL570 |
|
SG-86A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306066
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306066/suppl/GSM306066.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306067 | GPL570 |
|
SG-86B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306067
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306067/suppl/GSM306067.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306068 | GPL570 |
|
SG-90A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306068
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306068/suppl/GSM306068.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306069 | GPL570 |
|
SG-90B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306069
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306069/suppl/GSM306069.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306070 | GPL570 |
|
SG-91A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306070
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306070/suppl/GSM306070.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306071 | GPL570 |
|
SG-91B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306071
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306071/suppl/GSM306071.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306072 | GPL570 |
|
SG-92A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306072
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306072/suppl/GSM306072.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306073 | GPL570 |
|
SG-92B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306073
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306073/suppl/GSM306073.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306074 | GPL570 |
|
SG-94A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306074
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306074/suppl/GSM306074.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306075 | GPL570 |
|
SG-94B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306075
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306075/suppl/GSM306075.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306076 | GPL570 |
|
SG-95A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306076
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306076/suppl/GSM306076.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306077 | GPL570 |
|
SG-95B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306077
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306077/suppl/GSM306077.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306078 | GPL570 |
|
SG-103A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306078
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306078/suppl/GSM306078.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306079 | GPL570 |
|
SG-103B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306079
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306079/suppl/GSM306079.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306080 | GPL570 |
|
SG-107A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306080
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306080/suppl/GSM306080.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306081 | GPL570 |
|
SG-107B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306081
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306081/suppl/GSM306081.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306082 | GPL570 |
|
SG-108A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306082
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306082/suppl/GSM306082.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306083 | GPL570 |
|
SG-108B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306083
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306083/suppl/GSM306083.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306084 | GPL570 |
|
SG-109A_phenotype of EPC colony assay
|
cultured EPC, baseline
|
baseline
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306084
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306084/suppl/GSM306084.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
| | |
|
GSM306085 | GPL570 |
|
SG-109B_phenotype of EPC colony assay
|
cultured EPC, after 3 months of exercise
|
after 3 months of exercise
|
EPC sampled from blood and cultured
|
| Sample_geo_accession | GSM306085
| | Sample_status | Public on Dec 19 2008
| | Sample_submission_date | Jul 17 2008
| | Sample_last_update_date | Dec 19 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | cells were harvested after 5 days.
| | Sample_growth_protocol_ch1 | Blood was collected into CPT tubes with Ficoll and sodium heparin for isolation of mononuclear cells, washed twice in PBS with 5% fetal bovine serum and re-suspended in media for endothelial progenitor-colony-forming assay.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from cultured EPC with an RNAqueous micro RNA isolation kit (Ambion, Austin, TX). Cells were lysed in buffer containing guanidinium thiocyanate.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
| | Sample_hyb_protocol | Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
| | Sample_scan_protocol | Affymetrix GeneChip scanner
| | Sample_data_processing | Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Richard,,Cannon
| | Sample_contact_email | cannonr@nih.gov
| | Sample_contact_phone | 301-496-9895
| | Sample_contact_institute | NIH
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892-1454
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM306nnn/GSM306085/suppl/GSM306085.CEL.gz
| | Sample_series_id | GSE12155
| | Sample_data_row_count | 54675
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