Search results for the GEO ID: GSE12198  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM307002 | GPL570 |
|
Primary human NK cell, Replicate 1
|
Total RNA from primary human NK cells
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 1 of 5. Primary human NK cell.
|
| Sample_geo_accession | GSM307002
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307002/suppl/GSM307002.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307003 | GPL570 |
|
Primary human NK cell, Replicate 2
|
Total RNA from primary human NK cells
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 2 of 5. Primary human NK cell.
|
| Sample_geo_accession | GSM307003
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307003/suppl/GSM307003.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307004 | GPL570 |
|
Primary human NK cell, Replicate 3
|
Total RNA from primary human NK cells
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 3 of 5. Primary human NK cell.
|
| Sample_geo_accession | GSM307004
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307004/suppl/GSM307004.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307005 | GPL570 |
|
Primary human NK cell, Replicate 4
|
Total RNA from primary human NK cells
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 4 of 5. Primary human NK cell.
|
| Sample_geo_accession | GSM307005
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307005/suppl/GSM307005.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307006 | GPL570 |
|
Primary human NK cell, Replicate 5
|
Total RNA from primary human NK cells
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 5 of 5. Primary human NK cell.
|
| Sample_geo_accession | GSM307006
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307006/suppl/GSM307006.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307007 | GPL570 |
|
NKAES-derived NK cell, Replicate 1
|
Total RNA from NKAES-derived NK cells after 7 days of culture
|
cell type: human NK cells
passage: expanded
source: healthy donor
|
Biological replicate 1 of 5. NKAES-derived NK cell.
|
| Sample_geo_accession | GSM307007
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307007/suppl/GSM307007.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307008 | GPL570 |
|
NKAES-derived NK cell, Replicate 2
|
Total RNA from NKAES-derived NK cells after 7 days of culture
|
cell type: human NK cells
passage: expanded
source: healthy donor
|
Biological replicate 2 of 5. NKAES-derived NK cell.
|
| Sample_geo_accession | GSM307008
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307008/suppl/GSM307008.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307009 | GPL570 |
|
NKAES-derived NK cell, Replicate 3
|
Total RNA from NKAES-derived NK cells after 7 days of culture
|
cell type: human NK cells
passage: expanded
source: healthy donor
|
Biological replicate 3 of 5. NKAES-derived NK cell.
|
| Sample_geo_accession | GSM307009
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307009/suppl/GSM307009.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307010 | GPL570 |
|
NKAES-derived NK cell, Replicate 4
|
Total RNA from NKAES-derived NK cells after 7 days of culture
|
cell type: human NK cells
passage: expanded
source: healthy donor
|
Biological replicate 4 of 5. NKAES-derived NK cell.
|
| Sample_geo_accession | GSM307010
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307010/suppl/GSM307010.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM307011 | GPL570 |
|
NKAES-derived NK cell, Replicate 5
|
Total RNA from NKAES-derived NK cells after 7 days of culture
|
cell type: human NK cells
passage: expanded
source: healthy donor
|
Biological replicate 5 of 5. NKAES-derived NK cell.
|
| Sample_geo_accession | GSM307011
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Jul 22 2008
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307011/suppl/GSM307011.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM378260 | GPL570 |
|
NK cell stimulated by low dose IL2, Replicate 1
|
Total RNA from primary human NK cells, stimulated by low dose IL2
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 1 of 3. Primary human NK cell.
|
| Sample_geo_accession | GSM378260
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Mar 06 2009
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM378nnn/GSM378260/suppl/GSM378260.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM378261 | GPL570 |
|
NK cell stimulated by low dose IL2, Replicate 2
|
Total RNA from primary human NK cells, stimulated by low dose IL2
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 2 of 3. Primary human NK cell.
|
| Sample_geo_accession | GSM378261
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Mar 06 2009
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM378nnn/GSM378261/suppl/GSM378261.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM378262 | GPL570 |
|
NK cell stimulated by low dose IL2, Replicate 3
|
Total RNA from primary human NK cells, stimulated by low dose IL2
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 3 of 3. Primary human NK cell.
|
| Sample_geo_accession | GSM378262
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Mar 06 2009
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM378nnn/GSM378262/suppl/GSM378262.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM378263 | GPL570 |
|
NK cell stimulated by high dose IL2, Replicate 1
|
Total RNA from primary human NK cells, stimulated by high dose IL2
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 1 of 3. Primary human NK cell.
|
| Sample_geo_accession | GSM378263
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Mar 06 2009
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM378nnn/GSM378263/suppl/GSM378263.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM378264 | GPL570 |
|
NK cell stimulated by high dose IL2, Replicate 2
|
Total RNA from primary human NK cells, stimulated by high dose IL2
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 2 of 3. Primary human NK cell.
|
| Sample_geo_accession | GSM378264
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Mar 06 2009
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM378nnn/GSM378264/suppl/GSM378264.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
|
GSM378265 | GPL570 |
|
NK cell stimulated by high dose IL2, Replicate 3
|
Total RNA from primary human NK cells, stimulated by high dose IL2
|
cell type: human NK cells
passage: primary
source: healthy donor
|
Biological replicate 3 of 3. Primary human NK cell.
|
| Sample_geo_accession | GSM378265
| | Sample_status | Public on Mar 06 2010
| | Sample_submission_date | Mar 06 2009
| | Sample_last_update_date | Mar 15 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TriZol procedure
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 microg total RNA (Expression Analysis Technical Manual, 200Biotinylated cRNA were pre1, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS 3000-7G scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Noriko,,Shimasaki
| | Sample_contact_department | Oncology
| | Sample_contact_institute | St. Jude Children's Research Hospital
| | Sample_contact_address | 262 Danny Thomas Place
| | Sample_contact_city | Memphis
| | Sample_contact_state | TN
| | Sample_contact_zip/postal_code | 38105
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM378nnn/GSM378265/suppl/GSM378265.CEL.gz
| | Sample_series_id | GSE12198
| | Sample_data_row_count | 54613
| | |
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