Search results for the GEO ID: GSE12237 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM307534 | GPL96 |
|
MDA-MB-231 Parental
|
Breast cancer cell line
|
Breast cancer parental cell line
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307534
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307534/suppl/GSM307534.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307534/suppl/GSM307534.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307535 | GPL96 |
|
MDA-MB-231 Parental_AM
|
Breast cancer cell line MDA-MB-231
|
Breast cancer cell line MDA-MB-231 parental
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307535
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307535/suppl/GSM307535.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307535/suppl/GSM307535.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307536 | GPL96 |
|
MDA-MB-231 Parental_AM_B
|
MDA-MB-231 Breast cancer cell line
|
MDA-MB-231 breast cancer parental cell line
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307536
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307536/suppl/GSM307536.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307536/suppl/GSM307536.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307577 | GPL96 |
|
MDA-MB-231 BrM1a
|
MDA-MB-231 breast cancer cell line brain metastatic variant
|
MDA-MB-231 breast cancer cell line brain metastatic variant
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307577
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307577/suppl/GSM307577.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307577/suppl/GSM307577.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307578 | GPL96 |
|
MDA-MB-231 BrM2a
|
MDA-MB-231 breast cancer brain metastatic variant
|
MDA-MB-231 breast cancer brain metastatic variant
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307578
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307578/suppl/GSM307578.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307578/suppl/GSM307578.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307579 | GPL96 |
|
MDA-MB-231 BrM2b
|
MDA-MB-231 breast cancer cell line brain metastatic variant
|
MDA-MB-231 breast cancer cell line brain metastatic variant
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307579
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307579/suppl/GSM307579.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307579/suppl/GSM307579.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307580 | GPL96 |
|
MDA-MB-231 BrM3b
|
MDA-MB-231 breast cancer cell line brain metastatic variant
|
MDA-MB-231 breast cancer cell line brain metastatic variant
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307580
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307580/suppl/GSM307580.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307580/suppl/GSM307580.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307581 | GPL96 |
|
CN34 Parental
|
Breast cancer pleural effusion
|
Breast cancer pleural effusion, parental population isolated from patient
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307581
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307581/suppl/GSM307581.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307581/suppl/GSM307581.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307582 | GPL96 |
|
CN34 Parental replicate
|
Breast cancer pleural effusion
|
Breast cancer pleural effusion, parental population isolated from patient
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307582
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307582/suppl/GSM307582.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307582/suppl/GSM307582.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307583 | GPL96 |
|
CN34 BrM1a
|
Breast cancer pleural effusion
|
Breast cancer pleural effusion, brain metastatic isolate
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307583
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307583/suppl/GSM307583.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307583/suppl/GSM307583.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307584 | GPL96 |
|
CN34 BrM2a
|
Breast cancer pleural effusion
|
Breast cancer pleural effusion, brain metastatic isolate
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307584
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307584/suppl/GSM307584.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307584/suppl/GSM307584.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307585 | GPL96 |
|
CN34 BrM2c
|
Breast cancer pleural effusion
|
Breast cancer pleural effusion, brain metastatic isolate
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307585
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307585/suppl/GSM307585.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307585/suppl/GSM307585.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
|
GSM307586 | GPL96 |
|
CN34 BrM2b
|
Breast cancer pleural effusion
|
Breast cancer pleural effusion, brain metastatic variant
|
Breast cancer in vivo selection of brain metastatic variants to identify gene expression changes associated with brain metastasis
|
Sample_geo_accession | GSM307586
| Sample_status | Public on May 06 2009
| Sample_submission_date | Jul 24 2008
| Sample_last_update_date | May 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Rneasy mini kit Qiagen
| Sample_label_ch1 | biotin-labeled cRNA
| Sample_label_protocol_ch1 | standard Affymetrix labeling protocol (Invitrogen+Enzo)
| Sample_hyb_protocol | according to manufacturer
| Sample_scan_protocol | according to manufacturer on GC3000 scanner
| Sample_data_processing | Global intensity was targetted to 500. Data were extracted using GCOS 1.3
| Sample_platform_id | GPL96
| Sample_contact_name | Paula,D,Bos
| Sample_contact_laboratory | MASSAGUE
| Sample_contact_department | Cancer Biology
| Sample_contact_institute | Memorial Sloan Kettering Cancer Institute
| Sample_contact_address | 1275 York Avenue
| Sample_contact_city | New York
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10021
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307586/suppl/GSM307586.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307586/suppl/GSM307586.CHP.gz
| Sample_series_id | GSE12237
| Sample_data_row_count | 22283
| |
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